; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001258 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001258
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:28060983..28061285
RNA-Seq ExpressionLag0001258
SyntenyLag0001258
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037518.1 uncharacterized protein E6C27_scaffold277G001300 [Cucumis melo var. makuwa]1.1e-1759.09Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA
        MSS    GK   + LVEIEEQ+LYL+EVPDSIR+LESR++EI+ K DTID V+GR++G+PI+EL+ RV+ LEE   A R  ++ERGE+
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA

KAA0061346.1 uncharacterized protein E6C27_scaffold749G00290 [Cucumis melo var. makuwa]1.9e-1759.09Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA
        MSS    GK   + LVEIEEQ+LYL+EVPDSIR+LESR+ EI+ K DTID V+GR++G+PI+EL+ RV+ LEE   A R  ++ERGE+
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]2.7e-1960.47Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA
        MS+ KQ+ K+HV+ LVEIEEQLLYL EVPD +R LE+R+ E + K   ID V+ R+DG+PI+++ MRVE LE KATRP SFERG++
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]2.0e-1960.47Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA
        MS+ KQ+ K+HV+ LVEIEEQLLYL EVPDS+R LE+R+ E + K   ID V+ R+DG+PI+++ MRVE  E KATRP SFERG++
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]1.6e-1958.14Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA
        MS+ KQ+GK+H++ LVEIEE+LL+L E+PD++R++ESRL EI+TK D IDVV+ R+DG+ I+EL++RVE LE+K  R  + ERGE+
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA

TrEMBL top hitse value%identityAlignment
A0A5A7V4C9 Uncharacterized protein9.2e-1859.09Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA
        MSS    GK   + LVEIEEQ+LYL+EVPDSIR+LESR+ EI+ K DTID V+GR++G+PI+EL+ RV+ LEE   A R  ++ERGE+
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA

A0A5D3BQN3 Retrotrans_gag domain-containing protein5.4e-1859.09Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA
        MSS    GK   + LVEIEEQ+LYL+EVPDSIR+LESR++EI+ K DTID V+GR++G+PI+EL+ RV+ LEE   A R  ++ERGE+
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEE--KATRPSSFERGEA

A0A6J1D906 Reverse transcriptase1.3e-1960.47Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA
        MS+ KQ+ K+HV+ LVEIEEQLLYL EVPD +R LE+R+ E + K   ID V+ R+DG+PI+++ MRVE LE KATRP SFERG++
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA

A0A6J1DK29 uncharacterized protein LOC1110218299.8e-2060.47Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA
        MS+ KQ+ K+HV+ LVEIEEQLLYL EVPDS+R LE+R+ E + K   ID V+ R+DG+PI+++ MRVE  E KATRP SFERG++
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA

A0A6J1DLQ6 uncharacterized protein LOC1110223207.5e-2058.14Show/hide
Query:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA
        MS+ KQ+GK+H++ LVEIEE+LL+L E+PD++R++ESRL EI+TK D IDVV+ R+DG+ I+EL++RVE LE+K  R  + ERGE+
Subjt:  MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGAAAAAGCAGATGGGCAAGACCCATGTCGAATGGCTCGTAGAAATCGAAGAGCAGTTACTCTATTTGATAGAAGTCCCGGATTCAATTCGGTTCTTGGAATC
TCGCCTAAAAGAGATTGCAACCAAGACGGACACAATAGATGTGGTATCTGGCCGCATGGATGGAATTCCCATCAAAGAGTTAATAATGAGGGTTGAGAACCTCGAAGAAA
AAGCTACAAGACCTAGTAGCTTCGAGCGTGGGGAAGCTCGACGGGCTCTGTCGCCCAGATGGAGGAGCGTGTCGATGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGAAAAAGCAGATGGGCAAGACCCATGTCGAATGGCTCGTAGAAATCGAAGAGCAGTTACTCTATTTGATAGAAGTCCCGGATTCAATTCGGTTCTTGGAATC
TCGCCTAAAAGAGATTGCAACCAAGACGGACACAATAGATGTGGTATCTGGCCGCATGGATGGAATTCCCATCAAAGAGTTAATAATGAGGGTTGAGAACCTCGAAGAAA
AAGCTACAAGACCTAGTAGCTTCGAGCGTGGGGAAGCTCGACGGGCTCTGTCGCCCAGATGGAGGAGCGTGTCGATGGCTTAG
Protein sequenceShow/hide protein sequence
MSSKKQMGKTHVEWLVEIEEQLLYLIEVPDSIRFLESRLKEIATKTDTIDVVSGRMDGIPIKELIMRVENLEEKATRPSSFERGEARRALSPRWRSVSMA