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Lag0001259 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001259
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:28100361..28101778
RNA-Seq ExpressionLag0001259
SyntenyLag0001259
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]3.6e-2447.93Show/hide
Query:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA
        +W A + +   + GE+  K+ P    GF  E++ P G +E PV FG G ++VT+M++ LVV+   +YNAILGRPT+H LRA+ STYHQ +KFPT  GVG 
Subjt:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA

Query:  VYGEQKLSRECYFMALKNVDR
        + GEQ++SRECY+ ++++ DR
Subjt:  VYGEQKLSRECYFMALKNVDR

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]7.4e-2247.27Show/hide
Query:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC
        + GER  K+ P +   F  E++ P G  EL V FG G +++T +++FLV+D   +YNAILGRPT+H L+A+ STYHQ + FPT  G+G +  EQ++SREC
Subjt:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC

Query:  YFMALKNVDR
        Y+ ++K  DR
Subjt:  YFMALKNVDR

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]1.0e-2350Show/hide
Query:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC
        + GER  K+ P    GF  E + P G +ELPV FG G +++T+M++FLVVD   + NAILGRPT+H L+A+ S YHQ +KFPT  G+G + GEQ++SREC
Subjt:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC

Query:  YFMALKNVDR
        Y+ ++K  D+
Subjt:  YFMALKNVDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]3.0e-2347.93Show/hide
Query:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA
        +W A + +   + GE+  K+ P    GF  E++   G +ELPV FG G ++VT+M++FLVV+   +YNAILGRPT+H L+A+ STYHQ  KFPT  GVG 
Subjt:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA

Query:  VYGEQKLSRECYFMALKNVDR
        + GEQ++SRECY  ++++ DR
Subjt:  VYGEQKLSRECYFMALKNVDR

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]2.1e-2451.82Show/hide
Query:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC
        + GE+  K+ P    GF RE++ P G +EL V FG G ++VT+M++FLVVD   +YNAILGR T+H L+A+ STYHQ +KFPT  GVG + GEQ++SREC
Subjt:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC

Query:  YFMALKNVDR
        Y+ +++  DR
Subjt:  YFMALKNVDR

TrEMBL top hitse value%identityAlignment
A0A2N9F9R7 Uncharacterized protein2.8e-2236.65Show/hide
Query:  GFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSRECYFMALKNVDRRVQAR
        GF  +KI P G V LP+  G   +TV++ ++FLVV+C  AYNAI+GRPTL+ LRAV STYH +LKFPTE G+G V G+Q  +RECY  +L + DR+  + 
Subjt:  GFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSRECYFMALKNVDRRVQAR

Query:  SLKALEERPGDTLGLPKL-------------FPQKSDEQSHL-KRGPGTPEASPSF----FPRRVYAP--LGRADRLGKRPG------DSLDLPKFFPED
          + +  +P   L   +L              P   ++++HL KR     E         F R V+ P  L     + K  G      D  DL K  P+D
Subjt:  SLKALEERPGDTLGLPKL-------------FPQKSDEQSHL-KRGPGTPEASPSF----FPRRVYAP--LGRADRLGKRPG------DSLDLPKFFPED

Query:  EYSSWRIFSTSQSSYNLGHML
         +   RI     S+   GH L
Subjt:  EYSSWRIFSTSQSSYNLGHML

A0A6J1CTS4 uncharacterized protein LOC1110141471.7e-2447.93Show/hide
Query:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA
        +W A + +   + GE+  K+ P    GF  E++ P G +E PV FG G ++VT+M++ LVV+   +YNAILGRPT+H LRA+ STYHQ +KFPT  GVG 
Subjt:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA

Query:  VYGEQKLSRECYFMALKNVDR
        + GEQ++SRECY+ ++++ DR
Subjt:  VYGEQKLSRECYFMALKNVDR

A0A6J1DAK4 uncharacterized protein LOC1110189025.0e-2450Show/hide
Query:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC
        + GER  K+ P    GF  E + P G +ELPV FG G +++T+M++FLVVD   + NAILGRPT+H L+A+ S YHQ +KFPT  G+G + GEQ++SREC
Subjt:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC

Query:  YFMALKNVDR
        Y+ ++K  D+
Subjt:  YFMALKNVDR

A0A6J1DQY2 uncharacterized protein LOC1110223211.5e-2347.93Show/hide
Query:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA
        +W A + +   + GE+  K+ P    GF  E++   G +ELPV FG G ++VT+M++FLVV+   +YNAILGRPT+H L+A+ STYHQ  KFPT  GVG 
Subjt:  AWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGA

Query:  VYGEQKLSRECYFMALKNVDR
        + GEQ++SRECY  ++++ DR
Subjt:  VYGEQKLSRECYFMALKNVDR

A0A6J1DXV4 uncharacterized protein LOC1110251471.0e-2451.82Show/hide
Query:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC
        + GE+  K+ P    GF RE++ P G +EL V FG G ++VT+M++FLVVD   +YNAILGR T+H L+A+ STYHQ +KFPT  GVG + GEQ++SREC
Subjt:  EAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKLSREC

Query:  YFMALKNVDR
        Y+ +++  DR
Subjt:  YFMALKNVDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAGCATGGAGGGCAAGCCGCCGCGTTCAACGCCATGAAGCTGGGGAGCGATCGCCTAAGACCGAGCCTCACGCCGCTAGTGGGTTTTGGCGGGAAAAAATAAG
CCCGGGAGGAAGCGTTGAACTGCCAGTGGCGTTTGGAGAAGGGTTGCAAACAGTAACAAGGATGATCAACTTTCTGGTAGTAGACTGCGTCCCGGCGTATAATGCCATCC
TGGGACGACCTACCCTACATGGACTCAGAGCTGTGGCCTCAACCTACCACCAGGTCCTGAAATTCCCAACTGAAGAAGGGGTAGGAGCAGTGTATGGTGAACAGAAGCTG
TCGAGGGAGTGCTACTTTATGGCACTCAAGAACGTGGACAGGAGAGTCCAGGCAAGAAGTTTAAAGGCGCTTGAAGAGAGACCCGGGGACACCCTAGGCCTCCCCAAGCT
TTTTCCCCAGAAGAGTGATGAACAGAGCCACTTGAAGAGAGGCCCGGGGACGCCCGAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGACGAGCAG
ATCGGCTTGGAAAGAGGCCCGGGGACTCCCTAGACCTCCCTAAGTTTTTCCCCGAAGATGAATACAGTAGCTGGAGAATTTTCTCAACCTCCCAAAGTTCCTATAATCTG
GGGCACATGCTCCAGAATGGGATATGGCCGAGCAGATTGGCGGGCGACACAGAAGAAATGCTCAGCCCATGCTGTAGCCGAGGCCGAGCACCTCAGTGTCGAGGCCAACC
TAGAGGCACGTCGAACATGAATCTGCTACCCAAAATGCCAGGTATGAGGCTATTCTATTTACTCAAAATATGCAATTCTAGGGATAATAGATGCACATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAGCATGGAGGGCAAGCCGCCGCGTTCAACGCCATGAAGCTGGGGAGCGATCGCCTAAGACCGAGCCTCACGCCGCTAGTGGGTTTTGGCGGGAAAAAATAAG
CCCGGGAGGAAGCGTTGAACTGCCAGTGGCGTTTGGAGAAGGGTTGCAAACAGTAACAAGGATGATCAACTTTCTGGTAGTAGACTGCGTCCCGGCGTATAATGCCATCC
TGGGACGACCTACCCTACATGGACTCAGAGCTGTGGCCTCAACCTACCACCAGGTCCTGAAATTCCCAACTGAAGAAGGGGTAGGAGCAGTGTATGGTGAACAGAAGCTG
TCGAGGGAGTGCTACTTTATGGCACTCAAGAACGTGGACAGGAGAGTCCAGGCAAGAAGTTTAAAGGCGCTTGAAGAGAGACCCGGGGACACCCTAGGCCTCCCCAAGCT
TTTTCCCCAGAAGAGTGATGAACAGAGCCACTTGAAGAGAGGCCCGGGGACGCCCGAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGACGAGCAG
ATCGGCTTGGAAAGAGGCCCGGGGACTCCCTAGACCTCCCTAAGTTTTTCCCCGAAGATGAATACAGTAGCTGGAGAATTTTCTCAACCTCCCAAAGTTCCTATAATCTG
GGGCACATGCTCCAGAATGGGATATGGCCGAGCAGATTGGCGGGCGACACAGAAGAAATGCTCAGCCCATGCTGTAGCCGAGGCCGAGCACCTCAGTGTCGAGGCCAACC
TAGAGGCACGTCGAACATGAATCTGCTACCCAAAATGCCAGGTATGAGGCTATTCTATTTACTCAAAATATGCAATTCTAGGGATAATAGATGCACATTTTGA
Protein sequenceShow/hide protein sequence
MEKAWRASRRVQRHEAGERSPKTEPHAASGFWREKISPGGSVELPVAFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLRAVASTYHQVLKFPTEEGVGAVYGEQKL
SRECYFMALKNVDRRVQARSLKALEERPGDTLGLPKLFPQKSDEQSHLKRGPGTPEASPSFFPRRVYAPLGRADRLGKRPGDSLDLPKFFPEDEYSSWRIFSTSQSSYNL
GHMLQNGIWPSRLAGDTEEMLSPCCSRGRAPQCRGQPRGTSNMNLLPKMPGMRLFYLLKICNSRDNRCTF