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Lag0001276 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001276
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:28428268..28431798
RNA-Seq ExpressionLag0001276
SyntenyLag0001276
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG49402.1 hypothetical protein EZV62_025277 [Acer yangbiense]8.2e-1140.71Show/hide
Query:  KTKKKLVNALPCKIFTNKKINTEIFCSKMPRIW-NQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK-SATTIG
        K ++ L   L  KI T K +N E F + M  IW   E   IE +  N+F   FKN+  ++ I+ GGPW FD+AL+ LEEP G     +MEF K S   + 
Subjt:  KTKKKLVNALPCKIFTNKKINTEIFCSKMPRIW-NQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK-SATTIG

Query:  SLLGKVEQVDVDE
        S++G+V++VD+ E
Subjt:  SLLGKVEQVDVDE

TXG60692.1 hypothetical protein EZV62_015265 [Acer yangbiense]1.8e-1029.33Show/hide
Query:  SDDGEEEALGIVFFSALYALNAEFVRIAGWIRFAFVCGIMTTKDEADSILLRMSDLKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIF
        SDDG    LG +  + L  +    +  +GWI   F C    T  + + + L  S L V  E    V  L E  I+  +++L   L  ++FT+K IN E F
Subjt:  SDDGEEEALGIVFFSALYALNAEFVRIAGWIRFAFVCGIMTTKDEADSILLRMSDLKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIF

Query:  CSKMPRIWN-QEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK------------------SATTIGSLLGKVEQ
         + +P +W   E   +E++  N F   FKN    + +  GGPW FD+A+++ EEP GD     M+F K                      +G ++G V  
Subjt:  CSKMPRIWN-QEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK------------------SATTIGSLLGKVEQ

Query:  VDVDEECD
        VD++   D
Subjt:  VDVDEECD

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]5.8e-1744.63Show/hide
Query:  ADSILLRMSD-LKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFF
        AD +L R  + LK+T EEK  +F + E+EI+   K+   +L CK+ T K I  E+F + MPRIW   +  IE VG NLFLCKFK    K  I   GP FF
Subjt:  ADSILLRMSD-LKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFF

Query:  DKALLLLEEPKGDSCEDEMEF
        DK++++LEEP+ +   +E+E+
Subjt:  DKALLLLEEPKGDSCEDEMEF

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]2.8e-1938.95Show/hide
Query:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI
        AD +L ++ + LK+T EEK          +F + E+EI+   K+   +L CK+ T K I  E+F + MPRIW   +  IE VG NLFLCKFK    K  I
Subjt:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI

Query:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATTIGSLLGKVEQV-DVDEECDQIWGRSF----TRHTIKE
           GPWFFDK++++LEEP+ +   +E+EFRK   T   +L + + + D+   C  I    F    T  T KE
Subjt:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATTIGSLLGKVEQV-DVDEECDQIWGRSF----TRHTIKE

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]3.1e-1842.96Show/hide
Query:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI
        AD +L ++ + LK+T EEK          +F + E+EI+   K+   +L CK+ T K I  E+F + MPRIW   +  IE VG NLFLCKFK    K  I
Subjt:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI

Query:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATT
           GPWFFDK++++LEEP+ +   +E+EFR + TT
Subjt:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATT

TrEMBL top hitse value%identityAlignment
A0A5C7GYL2 CCHC-type domain-containing protein4.0e-1140.71Show/hide
Query:  KTKKKLVNALPCKIFTNKKINTEIFCSKMPRIW-NQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK-SATTIG
        K ++ L   L  KI T K +N E F + M  IW   E   IE +  N+F   FKN+  ++ I+ GGPW FD+AL+ LEEP G     +MEF K S   + 
Subjt:  KTKKKLVNALPCKIFTNKKINTEIFCSKMPRIW-NQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK-SATTIG

Query:  SLLGKVEQVDVDE
        S++G+V++VD+ E
Subjt:  SLLGKVEQVDVDE

A0A5C7HX07 DUF4283 domain-containing protein8.8e-1129.33Show/hide
Query:  SDDGEEEALGIVFFSALYALNAEFVRIAGWIRFAFVCGIMTTKDEADSILLRMSDLKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIF
        SDDG    LG +  + L  +    +  +GWI   F C    T  + + + L  S L V  E    V  L E  I+  +++L   L  ++FT+K IN E F
Subjt:  SDDGEEEALGIVFFSALYALNAEFVRIAGWIRFAFVCGIMTTKDEADSILLRMSDLKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIF

Query:  CSKMPRIWN-QEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK------------------SATTIGSLLGKVEQ
         + +P +W   E   +E++  N F   FKN    + +  GGPW FD+A+++ EEP GD     M+F K                      +G ++G V  
Subjt:  CSKMPRIWN-QEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRK------------------SATTIGSLLGKVEQ

Query:  VDVDEECD
        VD++   D
Subjt:  VDVDEECD

A0A6J1CQJ5 uncharacterized protein LOC1110134132.8e-1744.63Show/hide
Query:  ADSILLRMSD-LKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFF
        AD +L R  + LK+T EEK  +F + E+EI+   K+   +L CK+ T K I  E+F + MPRIW   +  IE VG NLFLCKFK    K  I   GP FF
Subjt:  ADSILLRMSD-LKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFF

Query:  DKALLLLEEPKGDSCEDEMEF
        DK++++LEEP+ +   +E+E+
Subjt:  DKALLLLEEPKGDSCEDEMEF

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.4e-1938.95Show/hide
Query:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI
        AD +L ++ + LK+T EEK          +F + E+EI+   K+   +L CK+ T K I  E+F + MPRIW   +  IE VG NLFLCKFK    K  I
Subjt:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI

Query:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATTIGSLLGKVEQV-DVDEECDQIWGRSF----TRHTIKE
           GPWFFDK++++LEEP+ +   +E+EFRK   T   +L + + + D+   C  I    F    T  T KE
Subjt:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATTIGSLLGKVEQV-DVDEECDQIWGRSF----TRHTIKE

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X21.5e-1842.96Show/hide
Query:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI
        AD +L ++ + LK+T EEK          +F + E+EI+   K+   +L CK+ T K I  E+F + MPRIW   +  IE VG NLFLCKFK    K  I
Subjt:  ADSILLRMSD-LKVTDEEK--------ACVFKLHEEEIDKTKKKLVNALPCKIFTNKKINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFI

Query:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATT
           GPWFFDK++++LEEP+ +   +E+EFR + TT
Subjt:  KEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGGTCTGCAATCTTATCTCTTTCTTCTTCTTTTTCTGGGGGAAACTCCGACGACGGCGAGGAAGAGGCTTTGGGCATCGTCTTCTTCAGTGCTCTGTATGCGCT
GAATGCAGAGTTTGTTAGGATCGCCGGGTGGATTCGTTTTGCTTTTGTCTGTGGAATAATGACGACTAAAGATGAGGCGGACTCAATTCTCTTGAGGATGAGTGATCTGA
AAGTCACAGATGAAGAAAAAGCTTGTGTTTTCAAACTTCATGAGGAAGAGATTGACAAAACAAAAAAGAAATTGGTGAATGCACTCCCTTGCAAAATCTTCACAAACAAG
AAAATCAACACTGAGATATTTTGTTCAAAGATGCCTCGGATCTGGAATCAAGAGCACACGCTTATCGAATATGTGGGATTCAATCTTTTCCTATGCAAATTTAAGAACGC
CCATATCAAGAGATTTATTAAGGAGGGTGGCCCCTGGTTTTTCGATAAGGCATTACTTCTTCTTGAGGAACCTAAAGGAGATAGCTGTGAAGATGAAATGGAATTCAGGA
AATCGGCTACAACAATTGGAAGCTTGCTTGGCAAGGTGGAGCAAGTGGATGTAGATGAAGAATGTGATCAAATCTGGGGAAGGTCTTTTACGAGACATACCATTAAAGAA
TGTGGTAAGCAACATGAGGCAAATGAAAATGACCTTCCATATGGTCCATTGATGCGAGAACCGATTAGACTAAAAGTTTGGAAATCAGGGGTATCACAAAATACATCATT
TTTCCAAGCGGGTCGAGGCAGAGGTCGTTCTGGGTTGGGAGGCAGGGAGGGCAGTTGGAGGAAAAACTATGCAAAAGGGGAGGAGGAAGATATGGCGGAAAAGACTACTC
AAGCTCAATCTGTAAAAGAAAAAATACCAGAGGAAGTGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGGTCTGCAATCTTATCTCTTTCTTCTTCTTTTTCTGGGGGAAACTCCGACGACGGCGAGGAAGAGGCTTTGGGCATCGTCTTCTTCAGTGCTCTGTATGCGCT
GAATGCAGAGTTTGTTAGGATCGCCGGGTGGATTCGTTTTGCTTTTGTCTGTGGAATAATGACGACTAAAGATGAGGCGGACTCAATTCTCTTGAGGATGAGTGATCTGA
AAGTCACAGATGAAGAAAAAGCTTGTGTTTTCAAACTTCATGAGGAAGAGATTGACAAAACAAAAAAGAAATTGGTGAATGCACTCCCTTGCAAAATCTTCACAAACAAG
AAAATCAACACTGAGATATTTTGTTCAAAGATGCCTCGGATCTGGAATCAAGAGCACACGCTTATCGAATATGTGGGATTCAATCTTTTCCTATGCAAATTTAAGAACGC
CCATATCAAGAGATTTATTAAGGAGGGTGGCCCCTGGTTTTTCGATAAGGCATTACTTCTTCTTGAGGAACCTAAAGGAGATAGCTGTGAAGATGAAATGGAATTCAGGA
AATCGGCTACAACAATTGGAAGCTTGCTTGGCAAGGTGGAGCAAGTGGATGTAGATGAAGAATGTGATCAAATCTGGGGAAGGTCTTTTACGAGACATACCATTAAAGAA
TGTGGTAAGCAACATGAGGCAAATGAAAATGACCTTCCATATGGTCCATTGATGCGAGAACCGATTAGACTAAAAGTTTGGAAATCAGGGGTATCACAAAATACATCATT
TTTCCAAGCGGGTCGAGGCAGAGGTCGTTCTGGGTTGGGAGGCAGGGAGGGCAGTTGGAGGAAAAACTATGCAAAAGGGGAGGAGGAAGATATGGCGGAAAAGACTACTC
AAGCTCAATCTGTAAAAGAAAAAATACCAGAGGAAGTGGCCTAA
Protein sequenceShow/hide protein sequence
MVRSAILSLSSSFSGGNSDDGEEEALGIVFFSALYALNAEFVRIAGWIRFAFVCGIMTTKDEADSILLRMSDLKVTDEEKACVFKLHEEEIDKTKKKLVNALPCKIFTNK
KINTEIFCSKMPRIWNQEHTLIEYVGFNLFLCKFKNAHIKRFIKEGGPWFFDKALLLLEEPKGDSCEDEMEFRKSATTIGSLLGKVEQVDVDEECDQIWGRSFTRHTIKE
CGKQHEANENDLPYGPLMREPIRLKVWKSGVSQNTSFFQAGRGRGRSGLGGREGSWRKNYAKGEEEDMAEKTTQAQSVKEKIPEEVA