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Lag0001287 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001287
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionexpansin-like A2
Genome locationchr4:28534003..28534627
RNA-Seq ExpressionLag0001287
SyntenyLag0001287
Gene Ontology termsNA
InterPro domainsIPR036749 - Expansin, cellulose-binding-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040376.1 expansin-like A2 [Cucumis melo var. makuwa]5.2e-1941.61Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGV+D                                    GGQTD+VAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPA+WK+G  YD+ VQIND  KESCPPWQCGD  WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

XP_022136197.1 expansin-like A2 [Momordica charantia]4.0e-1942.28Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGVID                                    GGQTDIVAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPA+WK+G  YD+ VQI D  KESCPPWQCGD +WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

XP_031744987.1 expansin-like A2 [Cucumis sativus]5.2e-1941.61Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGV+D                                    GGQTD+VAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPA+WK+G  YD+ VQIND  KESCPPWQCGD  WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

XP_038888765.1 expansin-like A2 [Benincasa hispida]1.5e-2142.95Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK GDLLNLGV+D                                    GGQTDIVAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKW+ ANSV+P NWK G+ YD++VQIND  KESCPPWQCGD KWK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

XP_038888788.1 expansin-like A2 [Benincasa hispida]6.1e-2042.28Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGV+D                                    GGQTD+VAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPANW+ G  YD+ VQIND  KESCPPWQCGDA+WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

TrEMBL top hitse value%identityAlignment
A0A1S3BJD7 expansin-like A22.5e-1941.61Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGV+D                                    GGQTD+VAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPA+WK+G  YD+ VQIND  KESCPPWQCGD  WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

A0A5D3D657 Expansin-like A21.2e-1840.67Show/hide
Query:  MALRGKCGDLLNLGVID-------------------------------------GGQTDIVAVDIAQV--------------------------------
        MAL GK  DLLNLGV+D                                     GGQT++VAVDIAQV                                
Subjt:  MALRGKCGDLLNLGVID-------------------------------------GGQTDIVAVDIAQV--------------------------------

Query:  --GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
          GYDGKWV A SVLPANW+ G  YD+ VQIND  KESCPPWQCGD  WK
Subjt:  --GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

A0A5D3DJC4 Expansin-like A22.5e-1941.61Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGV+D                                    GGQTD+VAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPA+WK+G  YD+ VQIND  KESCPPWQCGD  WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

A0A6J1C4W7 expansin-like A21.9e-1942.28Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGVID                                    GGQTDIVAVDIAQV                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPA+WK+G  YD+ VQI D  KESCPPWQCGD +WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

A0A6J1GKX8 expansin-like A35.6e-1940.94Show/hide
Query:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------
        MAL GK  DLLNLGV+D                                    GGQTD+VAVDIA+V                                 
Subjt:  MALRGKCGDLLNLGVID------------------------------------GGQTDIVAVDIAQV---------------------------------

Query:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
         GYDGKWV A SVLPA+WK+G  YD+ VQIND  KESCPPWQCGD  WK
Subjt:  -GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

SwissProt top hitse value%identityAlignment
Q10S70 Expansin-like A11.7e-0939.18Show/hide
Query:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLAN-SVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
        GGQTDIVAVD+AQV                                  GYDGKWV A+  VLP  W+ G+ YD+ VQI D  +E C P  C   +WK
Subjt:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLAN-SVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

Q7XCL0 Expansin-like A21.1e-0838.14Show/hide
Query:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLAN-SVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
        GGQTDIVAVD+A V                                  GYDGKWV A+  VLP  W  G+ YD+ VQI D  +E C P  C   +WK
Subjt:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLAN-SVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

Q8H274 Expansin-like A35.0e-0938.14Show/hide
Query:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLAN-SVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK
        GGQTDI+AVD+AQV                                  GYDGKWV A+  VLPANW+ G+ YD+  +I D  +ESC    C    WK
Subjt:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLAN-SVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWK

Q9LZT4 Expansin-like A16.6e-0936.36Show/hide
Query:  GGQTDIVAVDIAQV-----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPP
        GGQT++V++DIAQV                                   GYDGK + + SVLP+NW+ GK YD+ VQI D  +E C P
Subjt:  GGQTDIVAVDIAQV-----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPP

Q9SVE5 Expansin-like A26.6e-0937.89Show/hide
Query:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKW
        GGQT++VA+ IAQV                                  GYDGK V +  VLPANW+ GK YD+ VQI D  +E C P  C D  W
Subjt:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKW

Arabidopsis top hitse value%identityAlignment
AT3G45960.1 expansin-like A35.7e-0835.29Show/hide
Query:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESC
        GGQT++V +DIA V                                  GYDGK V +  VLPANW +G+ YD+ VQI D  +E C
Subjt:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESC

AT3G45960.2 expansin-like A35.7e-0835.29Show/hide
Query:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESC
        GGQT++V +DIA V                                  GYDGK V +  VLPANW +G+ YD+ VQI D  +E C
Subjt:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESC

AT3G45970.1 expansin-like A14.7e-1036.36Show/hide
Query:  GGQTDIVAVDIAQV-----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPP
        GGQT++V++DIAQV                                   GYDGK + + SVLP+NW+ GK YD+ VQI D  +E C P
Subjt:  GGQTDIVAVDIAQV-----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPP

AT4G38400.1 expansin-like A24.7e-1037.89Show/hide
Query:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKW
        GGQT++VA+ IAQV                                  GYDGK V +  VLPANW+ GK YD+ VQI D  +E C P  C D  W
Subjt:  GGQTDIVAVDIAQV----------------------------------GYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTTCGTGGAAAATGTGGGGACTTGTTGAATCTTGGAGTTATTGATGGTGGCCAAACGGATATTGTGGCTGTAGACATAGCTCAAGTCGGATATGATGGTAAATG
GGTATTGGCAAACTCCGTGCTTCCTGCTAATTGGAAAACTGGAAAATTTTATGACAGCAGAGTTCAGATCAATGACACTGTTAAGGAGAGTTGTCCTCCATGGCAATGTG
GTGATGCGAAATGGAAATATAAGGATTTATACAAGCTTTTCATCAACGCTCATTTTAATGTGTCATTTTTTATTGCCATGCATGCAATTAATCAGGATCTTATAAAGGTG
ATAAGGAAAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTTCGTGGAAAATGTGGGGACTTGTTGAATCTTGGAGTTATTGATGGTGGCCAAACGGATATTGTGGCTGTAGACATAGCTCAAGTCGGATATGATGGTAAATG
GGTATTGGCAAACTCCGTGCTTCCTGCTAATTGGAAAACTGGAAAATTTTATGACAGCAGAGTTCAGATCAATGACACTGTTAAGGAGAGTTGTCCTCCATGGCAATGTG
GTGATGCGAAATGGAAATATAAGGATTTATACAAGCTTTTCATCAACGCTCATTTTAATGTGTCATTTTTTATTGCCATGCATGCAATTAATCAGGATCTTATAAAGGTG
ATAAGGAAAATTTAG
Protein sequenceShow/hide protein sequence
MALRGKCGDLLNLGVIDGGQTDIVAVDIAQVGYDGKWVLANSVLPANWKTGKFYDSRVQINDTVKESCPPWQCGDAKWKYKDLYKLFINAHFNVSFFIAMHAINQDLIKV
IRKI