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Lag0001292 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001292
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAnkyrin repeat protein
Genome locationchr4:28739945..28740535
RNA-Seq ExpressionLag0001292
SyntenyLag0001292
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.7e-2343.14Show/hide
Query:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE
        M RGF+LFQ + LV AW+Y C  V ATF D TGV + GLN QFSFRAFG   +  PNVD +I S V  Q   +AP  IAPVGL+T ++ K  KA S+ L+
Subjt:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE

Query:  IPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI---------------VLKSRGSVVSHDLEATKSSDNVVVSHGHKIGLKKRG
        I +     G+   D +    + + IA SHGG +S+KS  S A S+GGKI               V   +  V S  L+  +   NV VS+G  I + KRG
Subjt:  IPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI---------------VLKSRGSVVSHDLEATKSSDNVVVSHGHKIGLKKRG

Query:  SIAF
        S+ F
Subjt:  SIAF

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]7.3e-2140.83Show/hide
Query:  MARG-FELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAP-KIAPVGLETPMSYKGHKAMSFGL
        M RG F+LFQ + LV AW+Y C  V ATF+D TGV + GLN QFSFRAFG   +  PNVD SI+S V  Q   +AP  IAPVGLETP++ K  K  S   
Subjt:  MARG-FELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAP-KIAPVGLETPMSYKGHKAMSFGL

Query:  EIPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI----------------------------VLKSRGSVVSHDLEATKSSDNV
        +I +     G+   D +    S + IA S+ G +S+KS +S A S+GGKI                             +K+     S  ++A K   NV
Subjt:  EIPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI----------------------------VLKSRGSVVSHDLEATKSSDNV

Query:  VVSHGHKIGLKKRGSIAF
         VSHG  I + KRGS+ F
Subjt:  VVSHGHKIGLKKRGSIAF

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]7.5e-1840.85Show/hide
Query:  RGFELFQIVFLVLAWQYCVNVSATFNDVTGVHDLGLNQQFSFR-AFGSHGL-RNPNVDSSIVSN-VDMQSPIKA--PKIAPVGLET-PMSYKGHKAMSFG
        +GF+LF I+FLVLA   CV V ATF+DVTG+  LG++ ++SFR   GS G+    N   S  S+ VD +SP +A  P IAP GLET P     H  M+F 
Subjt:  RGFELFQIVFLVLAWQYCVNVSATFNDVTGVHDLGLNQQFSFR-AFGSHGL-RNPNVDSSIVSN-VDMQSPIKA--PKIAPVGLET-PMSYKGHKAMSFG

Query:  LEIPQGSECLDLQIPKSKDGIATSHGGNISLKSSDSAISNGGKIVLKSRGS--VVSHDLEATKSSDNVVVSHGHKI--------GLK---KRGSIAFSHG
                     + K  D I    G NI+L S    ++NGGKI +KS  S   VSH LE + S +N  +S G +I        GLK   ++  +  SHG
Subjt:  LEIPQGSECLDLQIPKSKDGIATSHGGNISLKSSDSAISNGGKIVLKSRGS--VVSHDLEATKSSDNVVVSHGHKI--------GLK---KRGSIAFSHG

Query:  GKISLKSRAGGVV
        G IS+K R G +V
Subjt:  GKISLKSRAGGVV

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]6.6e-2245.37Show/hide
Query:  ATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLEIPQGSE-----CLDLQIP-KSKDGI
        ATFNDVTGV +L LN  FSFR FG   +  PN D S+ S V+  +  +AP  IAPVGL+TP++ KG K  +FGLEI +  E       D +I  KS   I
Subjt:  ATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLEIPQGSE-----CLDLQIP-KSKDGI

Query:  ATSHGGNISLKSSD--SAISNGGKIVLKSRGSV-VSHDLEATKSSD---------------------------NVVVSHGHKIGLKKRGSIAFSHGGKIS
        A SHGG ISLK     S   NGGK  LKS G+V VSH  E + S +                           N  VSHG  I +KKRGSI  S GGKI 
Subjt:  ATSHGGNISLKSSD--SAISNGGKIVLKSRGSV-VSHDLEATKSSD---------------------------NVVVSHGHKIGLKKRGSIAFSHGGKIS

Query:  LKSRA
        LKS A
Subjt:  LKSRA

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]3.5e-2342.11Show/hide
Query:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE
        MARGF LFQ + LV AW+Y C  V ATF+D TGV + GLN QFSFRAFG   +  PNVD SI S V+ Q   +AP  IAPVGLET M  K  K  S+ L+
Subjt:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE

Query:  IPQGSECLDLQIPKSKDGIATSHGGNISLKSSDSAISNGGKIVLKSRGSVVSHDLEAT-KSSDNVVVSHGHKIGLKKRGSIAFSHGGKIS
        I +                                        +K  G+VVSHD E+   S +N+  SHG K+ +K +GS+A S GG+I+
Subjt:  IPQGSECLDLQIPKSKDGIATSHGGNISLKSSDSAISNGGKIVLKSRGSVVSHDLEAT-KSSDNVVVSHGHKIGLKKRGSIAFSHGGKIS

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein5.2e-3348.03Show/hide
Query:  MARGFELFQIVFLVLAWQYCVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLEI
        MARGF+LFQ +FLV AWQ+CV V ATFNDVTGV +L LN  FSFR FG   +  PN D S+ S V+  +  +AP  IAPVGL+TP++ KG K  +FGLEI
Subjt:  MARGFELFQIVFLVLAWQYCVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLEI

Query:  PQGSE-----CLDLQIP-KSKDGIATSHGGNISLKSSD--SAISNGGKIVLKSRGSV-VSHDLEATKSSD---------------------------NVV
         +  E       D +I  KS   IA SHGG ISLK     S   NGGK  LKS G+V VSH  E + S +                           N  
Subjt:  PQGSE-----CLDLQIP-KSKDGIATSHGGNISLKSSD--SAISNGGKIVLKSRGSV-VSHDLEATKSSD---------------------------NVV

Query:  VSHGHKIGLKKRGSIAFSHGGKISLKSRA
        VSHG  I +KKRGSI  S GGKI LKS A
Subjt:  VSHGHKIGLKKRGSIAFSHGGKISLKSRA

A0A0A0K7W7 Uncharacterized protein4.4e-2441.2Show/hide
Query:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE
        MARGF+LFQ + LV AW+Y C  V ATF+D TGV + GLN QFSFRAFG   +  P+VD SI S V  Q   +AP  IAPVGLET M  K  K  S+ L+
Subjt:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE

Query:  IPQGSECLDLQIPKSKDGIA-TSHGGNISLKSSDS-AISNGGKIVLKSRGSVVS-------------HDLEATKSSDNVVVSHGHKIGLKK---RGSIAF
        I          I + K G A  SH    +L S ++ A S+GGK+ +KS+GSV               H+ +       +   HG  +GLK    + ++  
Subjt:  IPQGSECLDLQIPKSKDGIA-TSHGGNISLKSSDS-AISNGGKIVLKSRGSVVS-------------HDLEATKSSDNVVVSHGHKIGLKK---RGSIAF

Query:  SHGGKISLKSRAGGVV
        SHGG IS+  R   V+
Subjt:  SHGGKISLKSRAGGVV

A0A5A7U057 Ankyrin repeat protein1.3e-2343.14Show/hide
Query:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE
        M RGF+LFQ + LV AW+Y C  V ATF D TGV + GLN QFSFRAFG   +  PNVD +I S V  Q   +AP  IAPVGL+T ++ K  KA S+ L+
Subjt:  MARGFELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPK-IAPVGLETPMSYKGHKAMSFGLE

Query:  IPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI---------------VLKSRGSVVSHDLEATKSSDNVVVSHGHKIGLKKRG
        I +     G+   D +    + + IA SHGG +S+KS  S A S+GGKI               V   +  V S  L+  +   NV VS+G  I + KRG
Subjt:  IPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI---------------VLKSRGSVVSHDLEATKSSDNVVVSHGHKIGLKKRG

Query:  SIAF
        S+ F
Subjt:  SIAF

A0A5A7U0F0 Ankyrin repeat protein3.6e-1840.85Show/hide
Query:  RGFELFQIVFLVLAWQYCVNVSATFNDVTGVHDLGLNQQFSFR-AFGSHGL-RNPNVDSSIVSN-VDMQSPIKA--PKIAPVGLET-PMSYKGHKAMSFG
        +GF+LF I+FLVLA   CV V ATF+DVTG+  LG++ ++SFR   GS G+    N   S  S+ VD +SP +A  P IAP GLET P     H  M+F 
Subjt:  RGFELFQIVFLVLAWQYCVNVSATFNDVTGVHDLGLNQQFSFR-AFGSHGL-RNPNVDSSIVSN-VDMQSPIKA--PKIAPVGLET-PMSYKGHKAMSFG

Query:  LEIPQGSECLDLQIPKSKDGIATSHGGNISLKSSDSAISNGGKIVLKSRGS--VVSHDLEATKSSDNVVVSHGHKI--------GLK---KRGSIAFSHG
                     + K  D I    G NI+L S    ++NGGKI +KS  S   VSH LE + S +N  +S G +I        GLK   ++  +  SHG
Subjt:  LEIPQGSECLDLQIPKSKDGIATSHGGNISLKSSDSAISNGGKIVLKSRGS--VVSHDLEATKSSDNVVVSHGHKI--------GLK---KRGSIAFSHG

Query:  GKISLKSRAGGVV
        G IS+K R G +V
Subjt:  GKISLKSRAGGVV

A0A5A7U318 Ankyrin repeat protein3.5e-2140.83Show/hide
Query:  MARG-FELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAP-KIAPVGLETPMSYKGHKAMSFGL
        M RG F+LFQ + LV AW+Y C  V ATF+D TGV + GLN QFSFRAFG   +  PNVD SI+S V  Q   +AP  IAPVGLETP++ K  K  S   
Subjt:  MARG-FELFQIVFLVLAWQY-CVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAP-KIAPVGLETPMSYKGHKAMSFGL

Query:  EIPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI----------------------------VLKSRGSVVSHDLEATKSSDNV
        +I +     G+   D +    S + IA S+ G +S+KS +S A S+GGKI                             +K+     S  ++A K   NV
Subjt:  EIPQ-----GSECLDLQIP-KSKDGIATSHGGNISLKSSDS-AISNGGKI----------------------------VLKSRGSVVSHDLEATKSSDNV

Query:  VVSHGHKIGLKKRGSIAF
         VSHG  I + KRGS+ F
Subjt:  VVSHGHKIGLKKRGSIAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAGGTTTTGAGCTCTTTCAAATCGTTTTCTTAGTGTTGGCTTGGCAGTATTGTGTGAACGTAAGTGCCACTTTCAACGATGTCACTGGTGTTCACGATCTTGG
CCTCAATCAACAATTTTCCTTTCGGGCATTTGGATCACATGGTTTAAGGAACCCGAATGTCGACAGTAGCATCGTGTCAAATGTAGACATGCAGAGTCCCATAAAAGCAC
CAAAGATTGCTCCAGTTGGACTTGAAACTCCAATGAGTTATAAAGGCCATAAAGCTATGTCTTTCGGTCTCGAAATTCCGCAGGGCAGCGAATGCCTTGATTTACAAATT
CCAAAAAGCAAAGATGGCATTGCTACTTCCCACGGTGGAAATATAAGCTTGAAGAGCAGTGATAGTGCTATTTCTAATGGTGGCAAAATTGTCCTGAAGAGCAGAGGCAG
TGTTGTTTCTCATGACCTTGAAGCTACAAAGAGCAGCGACAACGTTGTTGTTTCTCATGGTCATAAAATTGGTCTAAAGAAGAGAGGCAGCATAGCTTTTTCTCATGGTG
GTAAAATTAGTTTAAAGAGCAGAGCTGGTGGTGTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGAGGTTTTGAGCTCTTTCAAATCGTTTTCTTAGTGTTGGCTTGGCAGTATTGTGTGAACGTAAGTGCCACTTTCAACGATGTCACTGGTGTTCACGATCTTGG
CCTCAATCAACAATTTTCCTTTCGGGCATTTGGATCACATGGTTTAAGGAACCCGAATGTCGACAGTAGCATCGTGTCAAATGTAGACATGCAGAGTCCCATAAAAGCAC
CAAAGATTGCTCCAGTTGGACTTGAAACTCCAATGAGTTATAAAGGCCATAAAGCTATGTCTTTCGGTCTCGAAATTCCGCAGGGCAGCGAATGCCTTGATTTACAAATT
CCAAAAAGCAAAGATGGCATTGCTACTTCCCACGGTGGAAATATAAGCTTGAAGAGCAGTGATAGTGCTATTTCTAATGGTGGCAAAATTGTCCTGAAGAGCAGAGGCAG
TGTTGTTTCTCATGACCTTGAAGCTACAAAGAGCAGCGACAACGTTGTTGTTTCTCATGGTCATAAAATTGGTCTAAAGAAGAGAGGCAGCATAGCTTTTTCTCATGGTG
GTAAAATTAGTTTAAAGAGCAGAGCTGGTGGTGTTGTTTAA
Protein sequenceShow/hide protein sequence
MARGFELFQIVFLVLAWQYCVNVSATFNDVTGVHDLGLNQQFSFRAFGSHGLRNPNVDSSIVSNVDMQSPIKAPKIAPVGLETPMSYKGHKAMSFGLEIPQGSECLDLQI
PKSKDGIATSHGGNISLKSSDSAISNGGKIVLKSRGSVVSHDLEATKSSDNVVVSHGHKIGLKKRGSIAFSHGGKISLKSRAGGVV