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Lag0001302 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001302
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionExpansin-like protein
Genome locationchr4:29034171..29034473
RNA-Seq ExpressionLag0001302
SyntenyLag0001302
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR007117 - Expansin, cellulose-binding-like domain
IPR036749 - Expansin, cellulose-binding-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022750.1 Expansin-like A3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0947.37Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR   A+WE D+ PE  + FQ+R+IS  D ++ T +  +P DWK G IYD G+Q+   I +GQESC  C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
XP_022135692.1 expansin-like A2 [Momordica charantia]3.3e-0946.05Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR   A+WE D+  EG + FQ+R+IS  D ++   + ++P +W+ G IYD GIQI   I +GQESC+PC  G W
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
XP_022928449.1 expansin-like A2 isoform X1 [Cucurbita moschata]1.1e-0947.37Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR   A+WE D+ PE  + FQ+R+IS  D ++ T +  +P DWK G IYD G+Q+   I +GQESC  C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
XP_023529769.1 expansin-like A2 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-0947.37Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR   A+WE D+ PE  + FQ+R+IS  D ++ T +  +P DWK G IYD G+Q+   I +GQESC  C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
XP_038888869.1 expansin-like A3 [Benincasa hispida]2.9e-1048.68Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR   A+WE D+VPE  + FQIR+IS  D ++   +  +P DWK G IYD G+QI   I +GQE+C+ C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
TrEMBL top hitse value%identityAlignment
A0A0A0K640 Expansin-like CBD domain-containing protein2.7e-0947.37Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR   A+WE D +PE  + FQIR+IS  D ++   +  +P DWK G IYD G+Q    I +GQESC  C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
A0A1S3BIH4 expansin-like A32.7e-0946.05Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR    +WE D++PE  + FQ+R+IS  D ++   +  +P DWK G IYD G+QI   I +GQESC  C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
A0A515EIV5 Expansin A10-like protein2.7e-0946.05Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR    +WE D++PE  + FQ+R+IS  D ++   +  +P DWK G IYD G+QI   I +GQESC  C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQ-DLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
A0A6A2YBE5 Expansin-like A27.8e-0938.82Show/hide
Query:  VLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLISSDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        V + G+  S     R  GA+W++   P G L F+ ++IS     +    LP DWK G +YDTG+QI       QE+CSPC  G W
Subjt:  VLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLISSDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
A0A6J1EKV9 expansin-like A2 isoform X15.4e-1047.37Show/hide
Query:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        M RR   A+WE D+ PE  + FQ+R+IS  D ++ T +  +P DWK G IYD G+Q+   I +GQESC  C  GHW
Subjt:  MRRRKNGAIWEADSVPEGQLNFQIRLISS-DVIFFTLQD-LPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
SwissProt top hitse value%identityAlignment
Q10S70 Expansin-like A11.1e-0432.89Show/hide
Query:  RKNGAIWEADSVPEGQLNFQIRLI-----SSDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
        R++G  W   + P G L  Q+RL+         ++   + LP+ W+ G +YDTG+QI       QE C PC    W
Subjt:  RKNGAIWEADSVPEGQLNFQIRLI-----SSDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHW
Q9LZT4 Expansin-like A16.4e-0831.82Show/hide
Query:  VLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLIS--SDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHWN
        + Q G+  +     R +GA+W  D VP G + F+  +       + ++   LP +W+ G IYD G+QI       QE C PC    WN
Subjt:  VLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLIS--SDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHWN
Arabidopsis top hitse value%identityAlignment
AT3G45970.1 expansin-like A14.5e-0931.82Show/hide
Query:  VLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLIS--SDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHWN
        + Q G+  +     R +GA+W  D VP G + F+  +       + ++   LP +W+ G IYD G+QI       QE C PC    WN
Subjt:  VLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLIS--SDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHWN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATTCTAGCAAGTTGAAACTAATTTTTGAATGTTGGGTTTTGCAGGACGGTGCCCTTGTGTCAACTGACATGAGAAGAAGAAAGAATGGGGCAATTTGGGAAGC
GGATTCAGTGCCTGAAGGGCAACTGAACTTCCAAATAAGGTTAATTTCAAGTGATGTCATTTTTTTCACATTGCAAGATCTTCCTCAAGATTGGAAACTTGGCGCGATTT
ATGATACTGGAATTCAAATTGGTCGTAACATTCCCGAAGGGCAAGAGAGTTGTAGTCCATGTGTTGGAGGGCATTGGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAATTCTAGCAAGTTGAAACTAATTTTTGAATGTTGGGTTTTGCAGGACGGTGCCCTTGTGTCAACTGACATGAGAAGAAGAAAGAATGGGGCAATTTGGGAAGC
GGATTCAGTGCCTGAAGGGCAACTGAACTTCCAAATAAGGTTAATTTCAAGTGATGTCATTTTTTTCACATTGCAAGATCTTCCTCAAGATTGGAAACTTGGCGCGATTT
ATGATACTGGAATTCAAATTGGTCGTAACATTCCCGAAGGGCAAGAGAGTTGTAGTCCATGTGTTGGAGGGCATTGGAACTGA
Protein sequenceShow/hide protein sequence
MINSSKLKLIFECWVLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLISSDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHWN