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Lag0001310 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001310
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLEA_2 domain-containing protein
Genome locationchr4:29163725..29164033
RNA-Seq ExpressionLag0001310
SyntenyLag0001310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589033.1 hypothetical protein SDJN03_17598, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4392.78Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSR+VTTSV+GHQVPLYGGISAIGNWRDQRQDGVEV LNLTVAVRSRAYILGRLVKSTFHT ITCP+TLSNKKLGKSHSFN +CTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

XP_008447896.1 PREDICTED: uncharacterized protein LOC103490245 [Cucumis melo]3.9e-4291.92Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSRR+ TSVAGHQVPLYGGISAIGNWRDQRQD  GVEV LNLTVAVRSRAYILGRLVKSTFHTTITCPITLS KKLGKSHSFN++CTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

XP_022928427.1 uncharacterized protein LOC111435243 [Cucurbita moschata]2.1e-4392.78Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSR+VTTSV+GHQVPLYGGISAIGNWRDQRQDGVEV LNLTVAVRSRAYILGRLVKSTFHT ITCP+TLSNKKLGKSHSFN +CTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

XP_022989441.1 uncharacterized protein LOC111486495 [Cucurbita maxima]2.1e-4392.78Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSR+VTTSV+GHQVPLYGGISAIGNWRDQRQDGVEV LNLTVAVRSRAYILGRLVKSTFHT ITCP+TLSNKKLGKSHSFN +CTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

XP_038888376.1 uncharacterized protein LOC120078225 [Benincasa hispida]3.3e-4191.75Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCT
        QMEEFYQKRQSSRRV TSVAGHQ+PLYGGISAIGNWRDQRQD  GVE+PLNLTVAVRSRAYILGRLVKSTFHTTITCPITLS KKLGK HSFN+SCT
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCT

TrEMBL top hitse value%identityAlignment
A0A0A0K4T2 LEA_2 domain-containing protein1.6e-4190.91Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSRRV TSVAGHQVPLYGGISAIGNWRDQRQD  GVEV LNLTVAVRSRAYILGRLVKSTFHTTITCPITLS  KLGKSHSFN++C YN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

A0A1S3BJ42 uncharacterized protein LOC1034902451.9e-4291.92Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSRR+ TSVAGHQVPLYGGISAIGNWRDQRQD  GVEV LNLTVAVRSRAYILGRLVKSTFHTTITCPITLS KKLGKSHSFN++CTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

A0A6J1EJW4 uncharacterized protein LOC1114352431.0e-4392.78Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSR+VTTSV+GHQVPLYGGISAIGNWRDQRQDGVEV LNLTVAVRSRAYILGRLVKSTFHT ITCP+TLSNKKLGKSHSFN +CTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

A0A6J1GK23 uncharacterized protein LOC1114550805.1e-4085.86Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QM+EFYQ+RQSSRR+TTSVAGHQVPLYGGI+AIGNWRDQ+QD  GVEVPLNLT+AVRSRAYILGRLVKSTFHTTITC +TLS  KLGK HSFN+SCTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQD--GVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

A0A6J1JK28 uncharacterized protein LOC1114864951.0e-4392.78Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN
        QMEEFYQKRQSSR+VTTSV+GHQVPLYGGISAIGNWRDQRQDGVEV LNLTVAVRSRAYILGRLVKSTFHT ITCP+TLSNKKLGKSHSFN +CTYN
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G45688.1 unknown protein1.6e-0932.74Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAI-------GNWRDQRQDG------------VEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNK
        +++FYQ R+S R V   V G ++PLYG  S +          + +++ G              VP+ L+  VRSRAY+LG+LV+  F+  I C I   +K
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAI-------GNWRDQRQDG------------VEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNK

Query:  KLGKSHSFNSSCT
         L K      +CT
Subjt:  KLGKSHSFNSSCT

AT2G41990.1 CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864)1.6e-1444.33Show/hide
Query:  NDNQMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSC
        +  +M +F   R     V T V GHQ+PLYGG+S          D + +PLNLT+ + S+AYILGRLV S F+T I C  TL    L KS S   SC
Subjt:  NDNQMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSC

AT3G24600.1 Late embryogenesis abundant protein, group 21.3e-0632.22Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSF
        Q++ +YQ R+S       + G +VPLYG     G          +VP+ L   +RSR  +LG+LVKS     ++C   +S+ K  K   F
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSF

AT4G35170.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.6e-2051.58Show/hide
Query:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCT
        QM EF Q+R+S R + T V G Q+PLYGG+ A+   R +  D V +PLNLT  +R+RAY+LGRLVK+TFH+ I C IT    KLGK+   + SC+
Subjt:  QMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCT

AT5G42860.1 unknown protein1.1e-1033.93Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAI-------GNWRDQRQDG-----------VEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKK
        +++FYQ R+S R V  +V G ++PLYG  S +          + +++ G             VP+ L   VRSRAY+LG+LV+  F+  I C I   +KK
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAI-------GNWRDQRQDG-----------VEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKK

Query:  LGKSHSFNSSCT
        L K     ++CT
Subjt:  LGKSHSFNSSCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGATAATCAGATGGAGGAGTTCTACCAAAAGAGGCAGAGCTCTCGGAGGGTGACGACATCGGTGGCGGGGCACCAAGTCCCGCTCTACGGCGGGATCTCAGC
GATCGGGAACTGGCGAGATCAACGCCAAGACGGGGTCGAGGTGCCGTTGAACCTCACGGTGGCTGTGAGGTCCAGAGCTTACATTCTGGGGAGGCTGGTGAAGTCTACAT
TCCATACAACTATTACATGTCCAATCACTCTTAGCAACAAGAAGCTTGGCAAATCACACTCTTTTAACAGTTCTTGCACTTACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGATAATCAGATGGAGGAGTTCTACCAAAAGAGGCAGAGCTCTCGGAGGGTGACGACATCGGTGGCGGGGCACCAAGTCCCGCTCTACGGCGGGATCTCAGC
GATCGGGAACTGGCGAGATCAACGCCAAGACGGGGTCGAGGTGCCGTTGAACCTCACGGTGGCTGTGAGGTCCAGAGCTTACATTCTGGGGAGGCTGGTGAAGTCTACAT
TCCATACAACTATTACATGTCCAATCACTCTTAGCAACAAGAAGCTTGGCAAATCACACTCTTTTAACAGTTCTTGCACTTACAATTGA
Protein sequenceShow/hide protein sequence
MENDNQMEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRQDGVEVPLNLTVAVRSRAYILGRLVKSTFHTTITCPITLSNKKLGKSHSFNSSCTYN