CuGenDBv2

Gene ID	Lag0001319
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ATP synthase subunit beta, chloroplastic
Genome location	chr4:29305440..29305808
RNA-Seq Expression	Lag0001319
Synteny	Lag0001319
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0009507 - chloroplast (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR024034 - ATPase, F1/V1 complex, beta/alpha subunit, C-terminal IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

AGL72981.1 ATP synthase beta subunit, partial [Iris confusa]

1.4e-41

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

AGL72984.1 ATP synthase beta subunit, partial [Iris pseudacorus]

1.4e-41

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

YP_009234562.1 ATP synthase CF1 beta subunit [Euptelea pleiosperma]

1.4e-41

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

YP_010116728.1 ATP synthase CF1 beta subunit [Iris tectorum]

1.4e-41

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

YP_010120841.1 CF1 subunit beta [Iris pseudacorus]

1.4e-41

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

TrEMBL top hits

e value

%identity

Alignment

A0A7H1CMS3 ATP synthase subunit beta, chloroplastic

6.5e-42

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

H2F4K3 ATP synthase subunit beta, chloroplastic

6.5e-42

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

O98767 ATP synthase subunit beta (Fragment)

6.5e-42

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

R4QG08 ATP synthase subunit beta (Fragment)

6.5e-42

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

R4QTK8 ATP synthase subunit beta (Fragment)

6.5e-42

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

SwissProt top hits

e value

%identity

Alignment

O03062 ATP synthase subunit beta, chloroplastic

5.7e-43

82.3

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  Q VKQT Q YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

Q31794 ATP synthase subunit beta, chloroplastic

5.7e-43

82.3

Show/hide

Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  Q VKQT Q YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

Q7YJW5 ATP synthase subunit beta, chloroplastic

2.0e-43

84.07

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQP IVGEEHYEI QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

Q95AD7 ATP synthase subunit beta, chloroplastic

8.8e-44

83.19

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Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQPWIVGEEHYE  QRVKQT Q YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

Q9MRQ5 ATP synthase subunit beta, chloroplastic

2.0e-43

84.07

Show/hide

Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M SL ER TSTKEGSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQP IVGEEHYEI QRVKQTSQ YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

Arabidopsis top hits

e value

%identity

Alignment

AT5G08670.1 ATP synthase alpha/beta family protein

2.1e-32

61.06

Show/hide

Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        + +L ER T+TK+GSITS+QA+Y PA+DLTD APAT FAH +ATT+LSR ++  GIYP VD LDSTS ML P I+GEEHY   + V++  Q+YK LQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L +DEL E+D+
Subjt:  ANLELDELFEEDR

AT5G08680.1 ATP synthase alpha/beta family protein

2.1e-32

61.06

Show/hide

Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        + +L ER T+TK+GSITS+QA+Y PA+DLTD APAT FAH +ATT+LSR ++  GIYP VD LDSTS ML P I+GEEHY   + V++  Q+YK LQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L +DEL E+D+
Subjt:  ANLELDELFEEDR

AT5G08690.1 ATP synthase alpha/beta family protein

2.1e-32

61.06

Show/hide

Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        + +L ER T+TK+GSITS+QA+Y PA+DLTD APAT FAH +ATT+LSR ++  GIYP VD LDSTS ML P I+GEEHY   + V++  Q+YK LQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L +DEL E+D+
Subjt:  ANLELDELFEEDR

ATCG00480.1 ATP synthase subunit beta

4.9e-42

79.65

Show/hide

Query:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII
        M +L ER TSTK+GSITSIQAVY PA+DLTD APAT FAH +ATT+LSRGLAAKGIYP VD LDSTSTMLQP IVGEEHYE  Q+VKQT Q YKELQDII
Subjt:  MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDII

Query:  ANLELDELFEEDR
        A L LDEL EEDR
Subjt:  ANLELDELFEEDR

Sequences

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CDS sequence

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ATGAGTTCCTTACCAGAAAGAAATACTTCTACCAAGGAAGGGTCCATAACTTCTATTCAAGCAGTTTATGAACCTGCGAACGATTTGACCGATCTTGCTCCTGCCACCAT
ATTTGCACATTTCGAAGCTACTACCATACTATCAAGAGGATTAGCTGCCAAAGGTATCTATCCAGTAGTAGATCATTTAGATTCAACGTCAACTATGCTACAACCTTGGA
TCGTTGGTGAAGAACATTATGAAATTGTGCAAAGAGTTAAACAAACTTCACAACATTACAAAGAACTACAAGACATTATAGCTAACCTTGAGTTGGACGAATTATTTGAA
GAGGATCGCTTTAACCATATCACGAGCACGAAAAATTGA

mRNA sequence

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Protein sequence

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MSSLPERNTSTKEGSITSIQAVYEPANDLTDLAPATIFAHFEATTILSRGLAAKGIYPVVDHLDSTSTMLQPWIVGEEHYEIVQRVKQTSQHYKELQDIIANLELDELFE
EDRFNHITSTKN

Lag0001319 (gene) of Sponge gourd (AG-4) v1 genome