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Lag0001321 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001321
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:29360845..29361189
RNA-Seq ExpressionLag0001321
SyntenyLag0001321
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]4.1e-2452.17Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + VLEVD + +I A LA + N L+N+ +       A V   +V+NQ A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPASCF
        +H ++ CPSNPAS F
Subjt:  DHNYEFCPSNPASCF

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]4.1e-2452.17Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + VLEVD + +I A LA + N L+N+ +       A V  A+ +NQ A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPASCF
        +H ++ CPSNPAS F
Subjt:  DHNYEFCPSNPASCF

XP_022947838.1 uncharacterized protein LOC111451598 [Cucurbita moschata]3.2e-2151.3Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  G +L+KT+NEA+EILERI++N+CQW DVR    KK + VLEVD + +I A LA + N L+N+         A    A+V+ Q A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPASCF
         H ++ CPSNPAS F
Subjt:  DHNYEFCPSNPASCF

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]3.8e-2251.33Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  GA+L+KT+NEA+EILERI++N+CQW+DVR    KK + VLEVD + +I A LA + N L+N+         A    A+V+ Q A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPAS
        +H ++ CP NPAS
Subjt:  DHNYEFCPSNPAS

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]1.4e-2453.04Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + VLEVD + +I A LA + N L+N+ +       A V  A+V+NQ A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPASCF
        +H ++ CPSNPAS F
Subjt:  DHNYEFCPSNPASCF

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333942.0e-2452.17Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + VLEVD + +I A LA + N L+N+ +       A V   +V+NQ A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPASCF
        +H ++ CPSNPAS F
Subjt:  DHNYEFCPSNPASCF

A0A6J1EQ90 uncharacterized protein LOC1114364112.0e-2452.17Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + VLEVD + +I A LA + N L+N+ +       A V  A+ +NQ A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPASCF
        +H ++ CPSNPAS F
Subjt:  DHNYEFCPSNPASCF

A0A6J1G7Q6 uncharacterized protein LOC1114515981.6e-2151.3Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  G +L+KT+NEA+EILERI++N+CQW DVR    KK + VLEVD + +I A LA + N L+N+         A    A+V+ Q A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPASCF
         H ++ CPSNPAS F
Subjt:  DHNYEFCPSNPASCF

A0A6J1H7E4 uncharacterized protein LOC1114611681.8e-2251.33Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE
        +VDAS  GA+L+KT+NEA+EILERI++N+CQW+DVR    KK + VLEVD + +I A LA + N L+N+         A    A+V+ Q A E+CVYCGE
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGT-NKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPA-VEPASVVNQAAEEACVYCGE

Query:  DHNYEFCPSNPAS
        +H ++ CP NPAS
Subjt:  DHNYEFCPSNPAS

U5CUI2 Retrotrans_gag domain-containing protein1.0e-1743.97Show/hide
Query:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRG-TNKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPAVEPASVVNQAAEEACVYCGED
        ++DAS  GA+L+K++NEA EILE I++N+ QWS+ R  T++KV  VLEVD +  + A +A + N LKN+ + + +    ++PA+ + Q+ + +CV+CGE 
Subjt:  MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRG-TNKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPAVEPASVVNQAAEEACVYCGED

Query:  HNYEFCPSNPAS-CFL
        H +E CPSNP S C++
Subjt:  HNYEFCPSNPAS-CFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCTTCGGTTGGAGGGGCCCTTTTGGCAAAAACTTTCAATGAAGCCCATGAAATTTTAGAGAGAATATCTACTAATAGTTGTCAGTGGTCAGATGTTAGAGG
CACAAATAAAAAGGTTAAGAGTGTGTTAGAAGTTGATGGTGTGTTCACCATTAGGGCTGATCTTGCAATAATTGCTAACACTCTTAAAAATGTGATAGTGATTAGTCATC
AGCAGCCACCAGCTGTGGAGCCTGCTTCAGTGGTGAACCAAGCAGCAGAGGAAGCATGTGTCTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAGCAATCCAGCT
TCGTGTTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCTTCGGTTGGAGGGGCCCTTTTGGCAAAAACTTTCAATGAAGCCCATGAAATTTTAGAGAGAATATCTACTAATAGTTGTCAGTGGTCAGATGTTAGAGG
CACAAATAAAAAGGTTAAGAGTGTGTTAGAAGTTGATGGTGTGTTCACCATTAGGGCTGATCTTGCAATAATTGCTAACACTCTTAAAAATGTGATAGTGATTAGTCATC
AGCAGCCACCAGCTGTGGAGCCTGCTTCAGTGGTGAACCAAGCAGCAGAGGAAGCATGTGTCTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAGCAATCCAGCT
TCGTGTTTTTTGTAG
Protein sequenceShow/hide protein sequence
MVDASVGGALLAKTFNEAHEILERISTNSCQWSDVRGTNKKVKSVLEVDGVFTIRADLAIIANTLKNVIVISHQQPPAVEPASVVNQAAEEACVYCGEDHNYEFCPSNPA
SCFL