; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001338 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001338
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr4:29773439..29773897
RNA-Seq ExpressionLag0001338
SyntenyLag0001338
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147768.1 uncharacterized protein LOC111016623 [Momordica charantia]3.2e-3247.92Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G +IRGF + IR +LV+DG H++GK+ G +L A  +DGNNQIYPV FGI   E+D SWT+F  Q++ AIG ++ LV VSDRH++I  +V  VFP+A 
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM
        HV C+HH++ NL  KFK+     LYL+     + S   Y  +++
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM

XP_022147769.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]1.9e-3251.8Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G +IRGF + IRPILVVDG H++GK+ G LLTA  IDGNNQIYP+ FG+   E D+SWT+F  +++  IG IN LV VSDRH+SI  +V TVFP+A+
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSY
        HV C+HHL   L  KF++     ++ K     + S+  Y
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSY

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]1.4e-3246.36Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G  IRGF + IRP+LV+DG H++GK+ G +LTA  +DGNNQIYP+ FGI   E++ SW++F  +++  IG ++ L+ VSDRH SI K+V  VFP+A+
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM-GCTDIK
        H  C+HHL  NLK KFK+ D   +++      Q S   Y  S++ G  D++
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM-GCTDIK

XP_038882416.1 protein FAR1-RELATED SEQUENCE 8-like [Benincasa hispida]2.5e-3760.63Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+ ++IRGFLN IRPIL+V GTH+RGK+SGKLL A G+DGNNQIYPV FGI  GET+ESW +F +Q+  AIG ++ +VIVSDRH SI K + TVFP+A 
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLK
        H  CIHHL+ NL   FK+ D + ++ K
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLK

XP_038885923.1 uncharacterized protein LOC120076231 [Benincasa hispida]6.2e-3655.24Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA G+TIRGFLN IRP+L+VD TH+R K+SGKLL A  +DGNNQIY V F I  GETDESW +F +Q+  AIG ++ LVIVSDRH SI KA+ TVFP+A 
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSE
        +  CIHHL+ NL   FK+ D   ++ K     + S   Y  S+
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSE

TrEMBL top hitse value%identityAlignment
A0A6J1D1Z5 protein FAR-RED ELONGATED HYPOCOTYL 3-like9.0e-3351.8Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G +IRGF + IRPILVVDG H++GK+ G LLTA  IDGNNQIYP+ FG+   E D+SWT+F  +++  IG IN LV VSDRH+SI  +V TVFP+A+
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSY
        HV C+HHL   L  KF++     ++ K     + S+  Y
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSY

A0A6J1D278 uncharacterized protein LOC1110166231.5e-3247.92Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G +IRGF + IR +LV+DG H++GK+ G +L A  +DGNNQIYPV FGI   E+D SWT+F  Q++ AIG ++ LV VSDRH++I  +V  VFP+A 
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM
        HV C+HH++ NL  KFK+     LYL+     + S   Y  +++
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM

A0A6J1DL12 uncharacterized protein LOC1110220774.1e-3347.02Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G  IRGF + IRP+LV+DG H++GK+ G +LTA  +DGNNQIYP+ FGI   E+D SW++F  +++  IG ++ L+ VSDRH SI K+V  VFP+A+
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM-GCTDIK
        H  C+HHL  NLK KFK+ D   +++      Q S   Y  S++ G  D++
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEM-GCTDIK

A0A6J1DU12 protein FAR-RED ELONGATED HYPOCOTYL 3-like2.2e-3150.36Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G +IRGF + IRPILVVDG H++GK+ G LLTA  IDGNNQIY + FG+     D+SWT+F  +++  IG IN LV +SDRH+SI  +V TVFPDA+
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSY
        HV C+HHL   L  KF++     ++ K     + S+  Y
Subjt:  HVYCIHHLQENLKTKFKDHDFIQLYLKLENKVQGSRPSY

A0A6J1DU86 uncharacterized protein LOC1110244862.2e-3156.78Show/hide
Query:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS
        MA+G +IRGF + IRPILVVDG H++GK+ G LLTA  IDGNNQIYP+ FG+   E D+SWT+F  +++  IG IN LV + D+H+SI  +V TVFPDA+
Subjt:  MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDAS

Query:  HVYCIHHLQENLKTKFKD
        HV C+HHL   L  KF++
Subjt:  HVYCIHHLQENLKTKFKD

SwissProt top hitse value%identityAlignment
P19775 Transposase for insertion sequence element IS256 in transposon Tn40011.2e-0530.19Show/hide
Query:  PILVVDGTHMRGKFSGKLLT-----AVGI--DGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHL
        P L+ D  +++ +   ++L+     A+GI  DG+ +I  +GF I  GE++E+WT FF  ++   G     +++SD HK ++ A+   F + S   C  H 
Subjt:  PILVVDGTHMRGKFSGKLLT-----AVGI--DGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHL

Query:  QENLKT
          N+ T
Subjt:  QENLKT

P59787 Transposase for insertion sequence element IS256 in transposon Tn40011.2e-0530.19Show/hide
Query:  PILVVDGTHMRGKFSGKLLT-----AVGI--DGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHL
        P L+ D  +++ +   ++L+     A+GI  DG+ +I  +GF I  GE++E+WT FF  ++   G     +++SD HK ++ A+   F + S   C  H 
Subjt:  PILVVDGTHMRGKFSGKLLT-----AVGI--DGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHL

Query:  QENLKT
          N+ T
Subjt:  QENLKT

Q3EBQ3 Protein FAR1-RELATED SEQUENCE 26.5e-0422.58Show/hide
Query:  SIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCI
        S   +++ D  ++R  +       +G+  + Q   +G  +    ++ ++++ FR   +A+G   P V+++D+ K +   V  VFPD  H++C+
Subjt:  SIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCI

Q9SSQ4 Protein FAR1-RELATED SEQUENCE 62.2e-0425.25Show/hide
Query:  ILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHLQENLKTK
        ++ +D +++ GKF   L+T  G++ + +   +  G   GET ES+ ++  ++  ++   +P  IV+DR K +  A+  VFP +   + + H+   +  K
Subjt:  ILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHLQENLKTK

Q9SWG3 Protein FAR-RED IMPAIRED RESPONSE 12.9e-0426.42Show/hide
Query:  SIRPILVVDGTHMRGKFSGKLLTA--VGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHLQE
        S   ++  D T++  KF+ KL  A  +G++ ++Q   +G  +   E+ E++ +  +   RA+G   P VI++D+ K ++ AV  + P+  H + + H+ E
Subjt:  SIRPILVVDGTHMRGKFSGKLLTA--VGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHLQE

Query:  NLKTKF
         +   F
Subjt:  NLKTKF

Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase4.8e-1026.92Show/hide
Query:  AIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHT-----VF
        A   +I+GF    RP++VVD  ++ GK+  KL+ A   D  NQ +P+ F + +  + +SW +F  +I   +     + ++S     IL  ++        
Subjt:  AIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHT-----VF

Query:  PDASHVYCIHHLQENLKTKFKDHDFIQLYL
        P A H +C++HL   L +     D+   +L
Subjt:  PDASHVYCIHHLQENLKTKFKDHDFIQLYL

AT1G64260.1 MuDR family transposase1.7e-1228.12Show/hide
Query:  AIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHT-----VF
        +   +I GF    RP++VVD   + GK+  KL+ A G+D  N+ +P+ F + +  + +SW +FF +I   +     L ++S   + I+  V+        
Subjt:  AIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHT-----VF

Query:  PDASHVYCIHHLQENLKTKFKDHDFIQL
        P A H +C++HL+      F+D++   L
Subjt:  PDASHVYCIHHLQENLKTKFKDHDFIQL

AT2G32250.1 FAR1-related sequence 24.6e-0522.58Show/hide
Query:  SIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCI
        S   +++ D  ++R  +       +G+  + Q   +G  +    ++ ++++ FR   +A+G   P V+++D+ K +   V  VFPD  H++C+
Subjt:  SIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCI

AT2G32250.2 FAR1-related sequence 24.6e-0522.58Show/hide
Query:  SIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCI
        S   +++ D  ++R  +       +G+  + Q   +G  +    ++ ++++ FR   +A+G   P V+++D+ K +   V  VFPD  H++C+
Subjt:  SIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCI

AT4G15090.1 FRS (FAR1 Related Sequences) transcription factor family2.1e-0526.42Show/hide
Query:  SIRPILVVDGTHMRGKFSGKLLTA--VGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHLQE
        S   ++  D T++  KF+ KL  A  +G++ ++Q   +G  +   E+ E++ +  +   RA+G   P VI++D+ K ++ AV  + P+  H + + H+ E
Subjt:  SIRPILVVDGTHMRGKFSGKLLTA--VGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHLQE

Query:  NLKTKF
         +   F
Subjt:  NLKTKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTGGGTCCACAATTAGAGGGTTCTTGAACTCTATTCGTCCGATTTTGGTTGTAGATGGGACCCACATGAGAGGAAAGTTCAGTGGAAAGCTCCTAACTGCAGT
AGGCATCGATGGAAACAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGGGGGGAAACCGATGAATCATGGACCTACTTTTTCCGGCAAATCGAGCGTGCTATTGGTC
ACATTAATCCCCTAGTGATTGTTTCTGACAGACACAAGAGTATATTGAAGGCAGTACACACTGTGTTTCCCGATGCATCCCACGTTTACTGTATCCACCATCTACAAGAA
AACTTGAAAACAAAGTTCAAGGATCACGACTTTATTCAACTCTACCTTAAACTTGAAAACAAAGTTCAAGGATCACGACCGTCGTACCGATGCAGCGAAATGGGATGCAC
CGATATCAAAATATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTGGGTCCACAATTAGAGGGTTCTTGAACTCTATTCGTCCGATTTTGGTTGTAGATGGGACCCACATGAGAGGAAAGTTCAGTGGAAAGCTCCTAACTGCAGT
AGGCATCGATGGAAACAACCAAATATACCCCGTAGGGTTTGGCATTGGGAGGGGGGAAACCGATGAATCATGGACCTACTTTTTCCGGCAAATCGAGCGTGCTATTGGTC
ACATTAATCCCCTAGTGATTGTTTCTGACAGACACAAGAGTATATTGAAGGCAGTACACACTGTGTTTCCCGATGCATCCCACGTTTACTGTATCCACCATCTACAAGAA
AACTTGAAAACAAAGTTCAAGGATCACGACTTTATTCAACTCTACCTTAAACTTGAAAACAAAGTTCAAGGATCACGACCGTCGTACCGATGCAGCGAAATGGGATGCAC
CGATATCAAAATATGGTGA
Protein sequenceShow/hide protein sequence
MAIGSTIRGFLNSIRPILVVDGTHMRGKFSGKLLTAVGIDGNNQIYPVGFGIGRGETDESWTYFFRQIERAIGHINPLVIVSDRHKSILKAVHTVFPDASHVYCIHHLQE
NLKTKFKDHDFIQLYLKLENKVQGSRPSYRCSEMGCTDIKIW