CuGenDBv2

Gene ID	Lag0001342
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Unknown protein
Genome location	chr4:29830373..29831908
RNA-Seq Expression	Lag0001342
Synteny	Lag0001342
Gene Ontology terms	GO:0042254 - ribosome biogenesis (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR036726 - GTP1/OBG domain superfamily IPR045086 - OBG-type GTPase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024173.1 putative GTP-binding protein OBGC2 [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-17

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDKGTSLSVG
        P LRI V      IGTV+KRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RR+ +MSLTSNVMRDESDK   L  G
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDKGTSLSVG

XP_008466515.2 PREDICTED: probable GTP-binding protein OBGC2 isoform X1 [Cucumis melo]

1.3e-17

76.71

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RRK +MSLTSNVMRDESDK
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

XP_008466516.2 PREDICTED: probable GTP-binding protein OBGC2 isoform X2 [Cucumis melo]

1.3e-17

76.71

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RRK +MSLTSNVMRDESDK
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

XP_022139960.1 probable GTP-binding protein OBGC2 [Momordica charantia]

5.7e-18

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Query:  SPPCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        S P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RRK +MSLTSNVMRDESDK
Subjt:  SPPCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

XP_038900001.1 probable GTP-binding protein OBGC2 [Benincasa hispida]

2.1e-17

75.34

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RR+ +MSLTSNVMRDESDK
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CRH4 probable GTP-binding protein OBGC2 isoform X2

6.1e-18

76.71

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RRK +MSLTSNVMRDESDK
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

A0A1S3CSR0 probable GTP-binding protein OBGC2 isoform X1

6.1e-18

76.71

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RRK +MSLTSNVMRDESDK
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

A0A5D3CNI4 Putative GTP-binding protein OBGC2 isoform X1

6.1e-18

76.71

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RRK +MSLTSNVMRDESDK
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

A0A6J1CDQ8 probable GTP-binding protein OBGC2

2.7e-18

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Query:  SPPCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        S P LRI V      IGTVVKRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RRK +MSLTSNVMRDESDK
Subjt:  SPPCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

A0A6J1IHB9 probable GTP-binding protein OBGC2

1.4e-17

73.97

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Query:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        P LRI V      IGTV+KRKRGKLL DLVHPG+ +LVARGGQGGI  IDTPE RR+ +MSLTSNVMRDESDK
Subjt:  PCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

SwissProt top hits

e value

%identity

Alignment

Q851Q6 Probable GTP-binding protein OBGC2

1.1e-13

63.33

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Query:  IGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK
        +GTVVKRK+G +L DL HPG+ V+VARGGQGGI  ID PE RR+  M L+ N+MRD SD+
Subjt:  IGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPE-RRKNIMSLTSNVMRDESDK

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCACCACAACAGAGGCCAGAAGAAGGACCACAAGGTATAGCTTCCCCATCACCGCCATGCTTGAGAATCGATGTTGCAAGTCCAACACAAGGTATAGGTACTGTTGT
AAAACGTAAAAGAGGAAAATTGTTGGTGGATCTGGTGCATCCAGGCAATGTGGTTCTTGTTGCTAGAGGAGGACAAGGAGGGATTATCCCGATAGATACGCCAGAGAGAA
GGAAAAATATTATGTCTCTGACCTCCAATGTGATGAGAGATGAAAGTGATAAGGGTACAAGTCTCAGTGTAGGGATGAAAGCCCTTTGCGCAGCGGAAAACTTCAAAGAC
CTTTTCGAATAA

mRNA sequence

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Protein sequence

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MAPQQRPEEGPQGIASPSPPCLRIDVASPTQGIGTVVKRKRGKLLVDLVHPGNVVLVARGGQGGIIPIDTPERRKNIMSLTSNVMRDESDKGTSLSVGMKALCAAENFKD
LFE

Lag0001342 (gene) of Sponge gourd (AG-4) v1 genome