| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046800.1 gag/pol protein [Cucumis melo var. makuwa] | 3.1e-35 | 31.11 | Show/hide |
Query: LSQFRGGVADCPTVPLITFAFLFKN-KLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--
LS F+ + CPT L+T KN + + + GYPKETR FF+P+EN+ FV TNA+F EE+HM +HKP+SK+ L NEAT++STRV D+
Subjt: LSQFRGGVADCPTVPLITFAFLFKN-KLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--
Query: ----------------------------------------AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------
QVVI DD IED L F++ MNDVDKD+W KAMDLEMKS+YFNS+W+LV L +G
Subjt: ----------------------------------------AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------
Query: --------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF-----------------------------------------
FD IKS+GF++++D C+YKKI VAF +
Subjt: --------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF-----------------------------------------
Query: -----------------------------------------------------------------------------------------EYQSNPGYDHW
YQSNPG DHW
Subjt: -----------------------------------------------------------------------------------------EYQSNPGYDHW
Query: RTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTD
V ILKYL RMR+YMLVYGAKDLILTGY D D
Subjt: RTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTD
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| KAA0049866.1 gag/pol protein [Cucumis melo var. makuwa] | 7.0e-43 | 39.24 | Show/hide |
Query: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--------------------------------------
GYPKE R FF+P+ENK FV TNA+F +E+HM +HKP+SK+ L NEAT+ STRVVD+
Subjt: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--------------------------------------
Query: ----AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------------------------------------------
QVVI DD +ED LS+++ +NDVDKD+W KAMDLEM+S+YFNS+W+LV L +G
Subjt: ----AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------------------------------------------
Query: ---------FDMVIKSFGFNQDIDGSCIYKKI-----------------------VSSTVAFFM---FEYQSNPGYDHWRTVNYILKYLWRMRNYMLVYG
FD VIKS+GF+Q++D C+YKKI S + + M YQSNPG DHW V I KYL RMR+YMLVYG
Subjt: ---------FDMVIKSFGFNQDIDGSCIYKKI-----------------------VSSTVAFFM---FEYQSNPGYDHWRTVNYILKYLWRMRNYMLVYG
Query: AKDLILTGYTDTDVLT
AKDLILTGYTD D T
Subjt: AKDLILTGYTDTDVLT
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| KAA0054281.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-36 | 39.42 | Show/hide |
Query: RRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEK---STRVVDKT---------------------------------
R+GYPKE++ F++ +ENK FV TNA+F EE+H+ NH+ +SK+ L ++ T++ ST++VDKT
Subjt: RRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEK---STRVVDKT---------------------------------
Query: AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLV-HLLD-----GFDMVIKSFGFNQDI-DGSCIYKK-----------IVSSTVA
AQ++I DD IED L++++ MNDVD D+W KAMDLEM+S+Y NS+W LV HL D +K G Q + D IY+K +S+
Subjt: AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLV-HLLD-----GFDMVIKSFGFNQDI-DGSCIYKK-----------IVSSTVA
Query: FFMF----------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
F+F YQSNPG DHW V ILKYL R+++YMLVYG+KDLILTGYTD+D T
Subjt: FFMF----------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
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| KAA0059678.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-36 | 31.39 | Show/hide |
Query: LSQFRGGVADCPTVPLITFAFLFKNKLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKTA--
LS FR + CP L+T K + +++ GYPKETR FF+P+EN+ FV TNA+F EE+HM +HK +SK+ L NEAT++STRV+D+
Subjt: LSQFRGGVADCPTVPLITFAFLFKNKLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKTA--
Query: --------QVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHL-------------------------------------------
QVVI DD +ED LS+++ MNDVDK++W KAMDLE++S+YFNS+W+LV L
Subjt: --------QVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHL-------------------------------------------
Query: -------------------------------------------------LDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF---------------
+GFD I+ +GF+Q++D C+YKKI VAF +
Subjt: -------------------------------------------------LDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF---------------
Query: ---------------------------------------------------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLI
YQSNPG DHW V ILKYL R R+YMLVYGAKDLI
Subjt: ---------------------------------------------------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLI
Query: LTGYTDTDVLT
LTGYTD+D T
Subjt: LTGYTDTDVLT
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| TYK19425.1 gag/pol protein [Cucumis melo var. makuwa] | 2.0e-42 | 45.53 | Show/hide |
Query: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMND
GYPKETR FF+P+EN+ FV TNA+F EE+HM +HKP+SK+ L NEAT+ S RVVD+ QVVI DD +ED S+++ MND
Subjt: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMND
Query: VDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG----------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMF--------------EY
VDKD+W KAMDLEM+S+YFNS+W+L L +G + M +K+ N +++ S + I + + M Y
Subjt: VDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG----------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMF--------------EY
Query: QSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
QSNPG DHW V ILKYL R R+YMLVYGAKDLILTGYTD D T
Subjt: QSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TUI8 Gag/pol protein | 1.5e-35 | 31.11 | Show/hide |
Query: LSQFRGGVADCPTVPLITFAFLFKN-KLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--
LS F+ + CPT L+T KN + + + GYPKETR FF+P+EN+ FV TNA+F EE+HM +HKP+SK+ L NEAT++STRV D+
Subjt: LSQFRGGVADCPTVPLITFAFLFKN-KLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--
Query: ----------------------------------------AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------
QVVI DD IED L F++ MNDVDKD+W KAMDLEMKS+YFNS+W+LV L +G
Subjt: ----------------------------------------AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------
Query: --------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF-----------------------------------------
FD IKS+GF++++D C+YKKI VAF +
Subjt: --------------------------FDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF-----------------------------------------
Query: -----------------------------------------------------------------------------------------EYQSNPGYDHW
YQSNPG DHW
Subjt: -----------------------------------------------------------------------------------------EYQSNPGYDHW
Query: RTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTD
V ILKYL RMR+YMLVYGAKDLILTGY D D
Subjt: RTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTD
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| A0A5A7UL66 Gag/pol protein | 1.8e-36 | 39.42 | Show/hide |
Query: RRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEK---STRVVDKT---------------------------------
R+GYPKE++ F++ +ENK FV TNA+F EE+H+ NH+ +SK+ L ++ T++ ST++VDKT
Subjt: RRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEK---STRVVDKT---------------------------------
Query: AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLV-HLLD-----GFDMVIKSFGFNQDI-DGSCIYKK-----------IVSSTVA
AQ++I DD IED L++++ MNDVD D+W KAMDLEM+S+Y NS+W LV HL D +K G Q + D IY+K +S+
Subjt: AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLV-HLLD-----GFDMVIKSFGFNQDI-DGSCIYKK-----------IVSSTVA
Query: FFMF----------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
F+F YQSNPG DHW V ILKYL R+++YMLVYG+KDLILTGYTD+D T
Subjt: FFMF----------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
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| A0A5A7UWW4 Gag/pol protein | 8.0e-37 | 31.39 | Show/hide |
Query: LSQFRGGVADCPTVPLITFAFLFKNKLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKTA--
LS FR + CP L+T K + +++ GYPKETR FF+P+EN+ FV TNA+F EE+HM +HK +SK+ L NEAT++STRV+D+
Subjt: LSQFRGGVADCPTVPLITFAFLFKNKLMATVASRRGYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKTA--
Query: --------QVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHL-------------------------------------------
QVVI DD +ED LS+++ MNDVDK++W KAMDLE++S+YFNS+W+LV L
Subjt: --------QVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHL-------------------------------------------
Query: -------------------------------------------------LDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF---------------
+GFD I+ +GF+Q++D C+YKKI VAF +
Subjt: -------------------------------------------------LDGFDMVIKSFGFNQDIDGSCIYKKIVSSTVAFFMF---------------
Query: ---------------------------------------------------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLI
YQSNPG DHW V ILKYL R R+YMLVYGAKDLI
Subjt: ---------------------------------------------------------------EYQSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLI
Query: LTGYTDTDVLT
LTGYTD+D T
Subjt: LTGYTDTDVLT
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| A0A5D3D7C0 Gag/pol protein | 9.8e-43 | 45.53 | Show/hide |
Query: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMND
GYPKETR FF+P+EN+ FV TNA+F EE+HM +HKP+SK+ L NEAT+ S RVVD+ QVVI DD +ED S+++ MND
Subjt: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT----------------AQVVILDDDIEDSLSFRKKMND
Query: VDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG----------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMF--------------EY
VDKD+W KAMDLEM+S+YFNS+W+L L +G + M +K+ N +++ S + I + + M Y
Subjt: VDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG----------------FDMVIKSFGFNQDIDGSCIYKK----IVSSTVAFFMF--------------EY
Query: QSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
QSNPG DHW V ILKYL R R+YMLVYGAKDLILTGYTD D T
Subjt: QSNPGYDHWRTVNYILKYLWRMRNYMLVYGAKDLILTGYTDTDVLT
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| A0A5D3DC34 Gag/pol protein | 3.4e-43 | 39.24 | Show/hide |
Query: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--------------------------------------
GYPKE R FF+P+ENK FV TNA+F +E+HM +HKP+SK+ L NEAT+ STRVVD+
Subjt: GYPKETRSRYFFNPKENKEFVLTNASFSEEEHMSNHKPQSKVSLSVLTNEATEKSTRVVDKT--------------------------------------
Query: ----AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------------------------------------------
QVVI DD +ED LS+++ +NDVDKD+W KAMDLEM+S+YFNS+W+LV L +G
Subjt: ----AQVVILDDDIEDSLSFRKKMNDVDKDKWFKAMDLEMKSLYFNSIWDLVHLLDG-------------------------------------------
Query: ---------FDMVIKSFGFNQDIDGSCIYKKI-----------------------VSSTVAFFM---FEYQSNPGYDHWRTVNYILKYLWRMRNYMLVYG
FD VIKS+GF+Q++D C+YKKI S + + M YQSNPG DHW V I KYL RMR+YMLVYG
Subjt: ---------FDMVIKSFGFNQDIDGSCIYKKI-----------------------VSSTVAFFM---FEYQSNPGYDHWRTVNYILKYLWRMRNYMLVYG
Query: AKDLILTGYTDTDVLT
AKDLILTGYTD D T
Subjt: AKDLILTGYTDTDVLT
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