; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001359 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001359
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr4:30177271..30178039
RNA-Seq ExpressionLag0001359
SyntenyLag0001359
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]2.7e-6766.29Show/hide
Query:  YAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYS
        YA  KI+KW+ RSSKH V++YDRS G+FHVKT  H  N+KGGNIQ+LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+STY  CY+
Subjt:  YAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYS

Query:  PQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP
         QFQP+PHEDYWI P+++P L  D  LLR+ GRPK+SR HNEMDW E + QQ+C  C+QLGHNRR C   +R AP
Subjt:  PQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP

KAA0039601.1 uncharacterized protein E6C27_scaffold744G00780 [Cucumis melo var. makuwa]5.8e-8664.35Show/hide
Query:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ
        MTTNL++C+NGV KG RML + A+AQ+TF++CV Y  +RREE +  L RR+KYT YA +KI+KW+ RSSKH V++YDRS G+FHVKTG H  N+K GNIQ
Subjt:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ

Query:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW
        +LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+ TY  CY+PQFQP+PHEDYWI P+++P L +D  LLR+ GR KSSR HNEMDW
Subjt:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW

Query:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP
         E + QQ+C  C+QLGHNR RC   +R AP
Subjt:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP

TYK01705.1 uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa]5.8e-8664.35Show/hide
Query:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ
        MTTNL++C+NGV KG RML + A+AQ+TF++CV Y  +RREE +  L RR+KYT YA +KI+KW+ RSSKH V++YDRS G+FHVKTG H  N+K GNIQ
Subjt:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ

Query:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW
        +LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+ TY  CY+PQFQP+PHEDYWI P+++P L +D  LLR+ GR KSSR HNEMDW
Subjt:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW

Query:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP
         E + QQ+C  C+QLGHNR RC   +R AP
Subjt:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP

XP_008457265.1 PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo]1.3e-8258.43Show/hide
Query:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYT-------------------------RYAHDKIVKWASRSSKHVVET
        MTTNL++C+NGV KG RML + A+AQ+TF++CV Y  +RREE +  L RR+KYT                         RYA +KI+KW+ RSSKH V++
Subjt:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYT-------------------------RYAHDKIVKWASRSSKHVVET

Query:  YDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPT
        YDRS G+FHVKTG H  N+K GNIQ+LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+ TY  CY+PQFQP+PHEDYWI P+++P 
Subjt:  YDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPT

Query:  LHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP
        L +D  LLR+ GR KSSR HNEMDW E + QQ+C  C+QLGHNR RC   +R AP
Subjt:  LHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP

XP_022143642.1 uncharacterized protein LOC111013502 [Momordica charantia]8.9e-9570.31Show/hide
Query:  TTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQV
        TTNL++CINGVLK  RMLP+TAL +LT YRCV+YFE+RREETR AL+R EKYTRYA+DK+V+WA+RS+KH V +YDR  GVFHVKTG+HYYN+KGGN Q+
Subjt:  TTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQV

Query:  LRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWR
        +R+T  E  C+C+KWQT+G+PCS+ M VCS +N NYEDYIE+ YKLS Y E Y+PQFQ IPHEDYWIA  N+P LH D  LLR PGRP+SSRIHNEMD R
Subjt:  LRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWR

Query:  EPTTQQQCGLCNQLGHNRRRCPSRQRDAP
        EP+ QQ+ GLCNQLGHN+R CPSR+R+AP
Subjt:  EPTTQQQCGLCNQLGHNRRRCPSRQRDAP

TrEMBL top hitse value%identityAlignment
A0A1S3C4P2 uncharacterized protein LOC1034969916.5e-8358.43Show/hide
Query:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYT-------------------------RYAHDKIVKWASRSSKHVVET
        MTTNL++C+NGV KG RML + A+AQ+TF++CV Y  +RREE +  L RR+KYT                         RYA +KI+KW+ RSSKH V++
Subjt:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYT-------------------------RYAHDKIVKWASRSSKHVVET

Query:  YDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPT
        YDRS G+FHVKTG H  N+K GNIQ+LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+ TY  CY+PQFQP+PHEDYWI P+++P 
Subjt:  YDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPT

Query:  LHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP
        L +D  LLR+ GR KSSR HNEMDW E + QQ+C  C+QLGHNR RC   +R AP
Subjt:  LHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP

A0A5A7T1X8 SWIM-type domain-containing protein1.3e-6766.29Show/hide
Query:  YAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYS
        YA  KI+KW+ RSSKH V++YDRS G+FHVKT  H  N+KGGNIQ+LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+STY  CY+
Subjt:  YAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYS

Query:  PQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP
         QFQP+PHEDYWI P+++P L  D  LLR+ GRPK+SR HNEMDW E + QQ+C  C+QLGHNRR C   +R AP
Subjt:  PQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRRRCPSRQRDAP

A0A5A7TD93 SWIM-type domain-containing protein2.8e-8664.35Show/hide
Query:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ
        MTTNL++C+NGV KG RML + A+AQ+TF++CV Y  +RREE +  L RR+KYT YA +KI+KW+ RSSKH V++YDRS G+FHVKTG H  N+K GNIQ
Subjt:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ

Query:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW
        +LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+ TY  CY+PQFQP+PHEDYWI P+++P L +D  LLR+ GR KSSR HNEMDW
Subjt:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW

Query:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP
         E + QQ+C  C+QLGHNR RC   +R AP
Subjt:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP

A0A5D3BR89 SWIM-type domain-containing protein2.8e-8664.35Show/hide
Query:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ
        MTTNL++C+NGV KG RML + A+AQ+TF++CV Y  +RREE +  L RR+KYT YA +KI+KW+ RSSKH V++YDRS G+FHVKTG H  N+K GNIQ
Subjt:  MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQ

Query:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW
        +LRL+ +ERYCSC+KWQ FGIPCSHFMAVCSR NMNYED++E+ YK+ TY  CY+PQFQP+PHEDYWI P+++P L +D  LLR+ GR KSSR HNEMDW
Subjt:  VLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDW

Query:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP
         E + QQ+C  C+QLGHNR RC   +R AP
Subjt:  REPTTQQQCGLCNQLGHNRRRCPSRQRDAP

A0A6J1CRF1 uncharacterized protein LOC1110135024.3e-9570.31Show/hide
Query:  TTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQV
        TTNL++CINGVLK  RMLP+TAL +LT YRCV+YFE+RREETR AL+R EKYTRYA+DK+V+WA+RS+KH V +YDR  GVFHVKTG+HYYN+KGGN Q+
Subjt:  TTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQV

Query:  LRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWR
        +R+T  E  C+C+KWQT+G+PCS+ M VCS +N NYEDYIE+ YKLS Y E Y+PQFQ IPHEDYWIA  N+P LH D  LLR PGRP+SSRIHNEMD R
Subjt:  LRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWR

Query:  EPTTQQQCGLCNQLGHNRRRCPSRQRDAP
        EP+ QQ+ GLCNQLGHN+R CPSR+R+AP
Subjt:  EPTTQQQCGLCNQLGHNRRRCPSRQRDAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase1.2e-0923.88Show/hide
Query:  DCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHV------KTGI--HYYNAKGGN
        + +  V K  R + +     L F +    F    + +R +L   + YT +  +K+ ++ + S   V+         + V      KT +     ++  G 
Subjt:  DCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHV------KTGI--HYYNAKGGN

Query:  IQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEM
        +Q+     N+  C+C ++Q    PC H +AVC  + +N   Y+++ Y +  Y + YS +F P+P    W     +PTL      + EP  PK S    E 
Subjt:  IQVLRLTPNERYCSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEM

Query:  D
        D
Subjt:  D

AT1G64255.1 MuDR family transposase9.8e-0724.36Show/hide
Query:  VTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFG
        VT    L F      F++    +R +L   + YT    DK+ ++ +    +           F V T +     KG  I  L    ++  C+C  +Q + 
Subjt:  VTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFG

Query:  IPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTL
         PC H +AVC ++  N   Y+++ Y L   +  Y+  F  +P    W   S +P L
Subjt:  IPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTL

AT1G64260.1 MuDR family transposase2.3e-0823.08Show/hide
Query:  VTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFG
        +T    L F      F++       +L R   YT    DK+ ++ + S  +V+   +R +          +  ++    +   +  N   C+C K+Q++ 
Subjt:  VTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERYCSCHKWQTFG

Query:  IPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTL
         PC H +AV  ++ +N   Y++E Y +  Y + Y+  F P+P    W     +PTL
Subjt:  IPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACCAATCTAGCAGATTGCATCAATGGAGTTCTGAAAGGAGGTCGTATGTTGCCTGTCACTGCACTCGCTCAATTGACTTTCTACAGATGTGTGCAATATTTTGA
GAGAAGAAGAGAAGAAACCAGAAAAGCTTTGGCACGACGAGAGAAATATACTCGGTACGCTCATGATAAAATTGTTAAATGGGCATCGAGATCTAGTAAACACGTGGTCG
AGACATATGATCGATCCACTGGTGTGTTCCATGTGAAAACAGGCATCCACTATTATAATGCCAAAGGAGGGAATATCCAGGTGTTGAGATTAACTCCAAATGAACGTTAC
TGTTCATGTCACAAATGGCAAACTTTTGGAATTCCATGTTCACATTTCATGGCAGTTTGCTCACGCGTCAACATGAATTATGAAGATTACATTGAGGAGACCTACAAGCT
TTCGACATATGAGGAATGCTATTCTCCTCAATTTCAACCGATTCCTCATGAAGACTACTGGATAGCCCCTTCGAACATTCCTACCCTTCATGCTGATAGAAGGTTGTTGA
GAGAACCTGGTAGACCAAAAAGTTCACGCATTCATAATGAGATGGACTGGAGGGAACCGACAACTCAACAACAATGTGGATTATGTAATCAGCTAGGTCACAATCGTAGG
AGATGTCCTTCGAGACAAAGGGATGCACCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCACCAATCTAGCAGATTGCATCAATGGAGTTCTGAAAGGAGGTCGTATGTTGCCTGTCACTGCACTCGCTCAATTGACTTTCTACAGATGTGTGCAATATTTTGA
GAGAAGAAGAGAAGAAACCAGAAAAGCTTTGGCACGACGAGAGAAATATACTCGGTACGCTCATGATAAAATTGTTAAATGGGCATCGAGATCTAGTAAACACGTGGTCG
AGACATATGATCGATCCACTGGTGTGTTCCATGTGAAAACAGGCATCCACTATTATAATGCCAAAGGAGGGAATATCCAGGTGTTGAGATTAACTCCAAATGAACGTTAC
TGTTCATGTCACAAATGGCAAACTTTTGGAATTCCATGTTCACATTTCATGGCAGTTTGCTCACGCGTCAACATGAATTATGAAGATTACATTGAGGAGACCTACAAGCT
TTCGACATATGAGGAATGCTATTCTCCTCAATTTCAACCGATTCCTCATGAAGACTACTGGATAGCCCCTTCGAACATTCCTACCCTTCATGCTGATAGAAGGTTGTTGA
GAGAACCTGGTAGACCAAAAAGTTCACGCATTCATAATGAGATGGACTGGAGGGAACCGACAACTCAACAACAATGTGGATTATGTAATCAGCTAGGTCACAATCGTAGG
AGATGTCCTTCGAGACAAAGGGATGCACCATTGTGA
Protein sequenceShow/hide protein sequence
MTTNLADCINGVLKGGRMLPVTALAQLTFYRCVQYFERRREETRKALARREKYTRYAHDKIVKWASRSSKHVVETYDRSTGVFHVKTGIHYYNAKGGNIQVLRLTPNERY
CSCHKWQTFGIPCSHFMAVCSRVNMNYEDYIEETYKLSTYEECYSPQFQPIPHEDYWIAPSNIPTLHADRRLLREPGRPKSSRIHNEMDWREPTTQQQCGLCNQLGHNRR
RCPSRQRDAPL