; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001378 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001378
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDihydroxy-acid dehydratase
Genome locationchr4:30424283..30432578
RNA-Seq ExpressionLag0001378
SyntenyLag0001378
Gene Ontology termsGO:0007275 - multicellular organism development (biological process)
GO:0009082 - branched-chain amino acid biosynthetic process (biological process)
GO:0004160 - dihydroxy-acid dehydratase activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR000581 - Dihydroxy-acid/6-phosphogluconate dehydratase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON72889.1 Dihydroxy-acid dehydratase [Trema orientale]3.0e-2558.41Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + G+TLAENAK FLPLS+GQDII+PLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF GP         V  GE  + +   E P  +  +VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

XP_004134011.1 dihydroxy-acid dehydratase, chloroplastic [Cucumis sativus]1.0e-2559.29Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK+FLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF GP         V  GE  + +   + P  +  + V+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

XP_015887506.1 dihydroxy-acid dehydratase, chloroplastic-like [Ziziphus jujuba]1.7e-2558.41Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAPEGSVAKITGKEGLYF GP         V  GE  + +   E P  +  +VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

XP_024932691.1 dihydroxy-acid dehydratase, chloroplastic-like [Ziziphus jujuba]3.9e-2557.52Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAP+GSVAKITGKEGLYF GP         V  GE  + +   E P  +  +VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

XP_038904820.1 dihydroxy-acid dehydratase, chloroplastic [Benincasa hispida]1.3e-2559.29Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK+FLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF GP         V  GE  + +   + P  +    V+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

TrEMBL top hitse value%identityAlignment
A0A0A0L6U0 Uncharacterized protein4.9e-2659.29Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK+FLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF GP         V  GE  + +   + P  +  + V+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

A0A2P5DHU7 Dihydroxy-acid dehydratase1.4e-2558.41Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + G+TLAENAK FLPLS+GQDII+PLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF GP         V  GE  + +   E P  +  +VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

A0A6P3YTD8 dihydroxy-acid dehydratase, chloroplastic-like1.9e-2557.52Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAP+GSVAKITGKEGLYF GP         V  GE  + +   E P  +  +VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

A0A6P4A226 dihydroxy-acid dehydratase, chloroplastic-like8.4e-2658.41Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAPEGSVAKITGKEGLYF GP         V  GE  + +   E P  +  +VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

A0A6P6GEZ1 dihydroxy-acid dehydratase, chloroplastic-like1.9e-2557.52Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAP+GSVAKITGKEGLYF GP         V  GE  + +   E P  +  +VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ
         G+  K   G+ +
Subjt:  HGKPTKVSTGVKQ

SwissProt top hitse value%identityAlignment
A2RKQ9 Dihydroxy-acid dehydratase1.2e-1671.43Show/hide
Query:  IPGKTLAENAKMFLPLS-EGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYG
        + GKTLAEN K  L L  E QDI++PLENPIK TGHLQILYGNLA  GSVAKI+GKEG +F G
Subjt:  IPGKTLAENAKMFLPLS-EGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYG

Q02YY5 Dihydroxy-acid dehydratase3.4e-1669.84Show/hide
Query:  IPGKTLAENAKMFLPLS-EGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYG
        + GKTLAEN +  L L  + QDII+PLENPIK TGHLQILYGNLA  GSVAKI+GKEG +F G
Subjt:  IPGKTLAENAKMFLPLS-EGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYG

Q10318 Putative dihydroxy-acid dehydratase, mitochondrial6.9e-1769.35Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYG
        + GKTLAEN + F  L+EGQ II+PL NPIK  GHL++L G+LAPEGSVAKITGKEGL F G
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYG

Q11NN5 Dihydroxy-acid dehydratase1.2e-1666.67Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGP
        + GKT+ EN K    L   QD++   ENPIK+TGHLQILYGNLAP+GSVAKITGKEG YF GP
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGP

Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic6.6e-2041.98Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + G+TLA+N +    L+EGQ+II+PL NPIK+TGH+QIL G+LAP+GSVAKITGKEGLYF GP         V  GE  + +     P  +   VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ-----SRVFCTSVGHDCS
         G+  K   G+ +     S +    +G +C+
Subjt:  HGKPTKVSTGVKQ-----SRVFCTSVGHDCS

Arabidopsis top hitse value%identityAlignment
AT3G23940.1 dehydratase family4.7e-2141.98Show/hide
Query:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL
        + G+TLA+N +    L+EGQ+II+PL NPIK+TGH+QIL G+LAP+GSVAKITGKEGLYF GP         V  GE  + +     P  +   VV+  +
Subjt:  IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFL

Query:  HGKPTKVSTGVKQ-----SRVFCTSVGHDCS
         G+  K   G+ +     S +    +G +C+
Subjt:  HGKPTKVSTGVKQ-----SRVFCTSVGHDCS

AT3G23940.2 dehydratase family1.0e-2042.64Show/hide
Query:  GKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHG
        G+TLA+N +    L+EGQ+II+PL NPIK+TGH+QIL G+LAP+GSVAKITGKEGLYF GP         V  GE  + +     P  +   VV+  + G
Subjt:  GKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHG

Query:  KPTKVSTGVKQ-----SRVFCTSVGHDCS
        +  K   G+ +     S +    +G +C+
Subjt:  KPTKVSTGVKQ-----SRVFCTSVGHDCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGCATCACCAAGTTCCTCAACTCTTCTTCTTATTTTCATTTCGTTTGGCCAGCACTTATCTTTCTCAACTTCGATGCTGTCTCCAAGCATTCTCTGGCGAGCG
GCGCCGTAGCAGCAGTTTAGGGCAGTTCGTCGATGTGGGTTTGCAGCAGTTTTTCAACGTGGTTTTGGTTTATGCGCAAACAGCAGCGTGGTGGCTCGTTTTTGGGCGTT
TTCGTCAAGCTTTCGGCATGGATCTGAAACGGGAAGGGGAGGAGGAGCTCCTCCTCCCCGAAACTCTCTTTTTTAAAAAAAAAAAAACAGAAGAAAGGAAGAGAAAGAAG
AAGAAGGGAAGAAGAGAAGAAGAAAAGAAGAAGAAAGAAGAAAAAAAAAAAATTCCGGGAAAGACGCTGGCTGAAAATGCTAAAATGTTCCTACCTCTATCTGAAGGGCA
GGATATTATTAAACCCTTGGAGAATCCCATCAAGAAGACAGGGCACCTTCAAATATTATATGGAAATCTTGCTCCCGAGGGTTCAGTAGCTAAGATTACTGGCAAGGAGG
GGCTATATTTCTATGGCCCTGAATGTGAACCTAGCAACACGATCAAAGTTCGAAGAGGAGAAAATTTATTGTTTAGTACATTTATTGAGACTCCATGCATGTATATGAAG
GAGGTTGTCATGTTCTTCCTTCATGGAAAACCAACTAAAGTGTCAACTGGTGTGAAACAATCAAGAGTATTCTGCACGAGTGTTGGCCACGATTGCTCAACTCCGTTGGA
ATTACAGCAAAACAAGAGGGAGTTTCGGGTAGGAGGTGCTCCTCCTCCCCAATTCAGCACCGAAATCGGGGATCCTCCTCCCCGTCTCGTTTCAGATCTAAAAGAAAAGA
AAGGAGAAGAAGAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAATCTGGCAGACCGCAGTGGGCGGCGGGGGCCACTAGAACAAAAGAAGAAGGAGATGGGGAAGGAAGA
AGATGGAGAGGAGAAAGAAGATGGGGAAGAAAGAAAGAGAGAGAATTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATGCATCACCAAGTTCCTCAACTCTTCTTCTTATTTTCATTTCGTTTGGCCAGCACTTATCTTTCTCAACTTCGATGCTGTCTCCAAGCATTCTCTGGCGAGCG
GCGCCGTAGCAGCAGTTTAGGGCAGTTCGTCGATGTGGGTTTGCAGCAGTTTTTCAACGTGGTTTTGGTTTATGCGCAAACAGCAGCGTGGTGGCTCGTTTTTGGGCGTT
TTCGTCAAGCTTTCGGCATGGATCTGAAACGGGAAGGGGAGGAGGAGCTCCTCCTCCCCGAAACTCTCTTTTTTAAAAAAAAAAAAACAGAAGAAAGGAAGAGAAAGAAG
AAGAAGGGAAGAAGAGAAGAAGAAAAGAAGAAGAAAGAAGAAAAAAAAAAAATTCCGGGAAAGACGCTGGCTGAAAATGCTAAAATGTTCCTACCTCTATCTGAAGGGCA
GGATATTATTAAACCCTTGGAGAATCCCATCAAGAAGACAGGGCACCTTCAAATATTATATGGAAATCTTGCTCCCGAGGGTTCAGTAGCTAAGATTACTGGCAAGGAGG
GGCTATATTTCTATGGCCCTGAATGTGAACCTAGCAACACGATCAAAGTTCGAAGAGGAGAAAATTTATTGTTTAGTACATTTATTGAGACTCCATGCATGTATATGAAG
GAGGTTGTCATGTTCTTCCTTCATGGAAAACCAACTAAAGTGTCAACTGGTGTGAAACAATCAAGAGTATTCTGCACGAGTGTTGGCCACGATTGCTCAACTCCGTTGGA
ATTACAGCAAAACAAGAGGGAGTTTCGGGTAGGAGGTGCTCCTCCTCCCCAATTCAGCACCGAAATCGGGGATCCTCCTCCCCGTCTCGTTTCAGATCTAAAAGAAAAGA
AAGGAGAAGAAGAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAATCTGGCAGACCGCAGTGGGCGGCGGGGGCCACTAGAACAAAAGAAGAAGGAGATGGGGAAGGAAGA
AGATGGAGAGGAGAAAGAAGATGGGGAAGAAAGAAAGAGAGAGAATTTTTTTAA
Protein sequenceShow/hide protein sequence
MVMHHQVPQLFFLFSFRLASTYLSQLRCCLQAFSGERRRSSSLGQFVDVGLQQFFNVVLVYAQTAAWWLVFGRFRQAFGMDLKREGEEELLLPETLFFKKKKTEERKRKK
KKGRREEEKKKKEEKKKIPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMK
EVVMFFLHGKPTKVSTGVKQSRVFCTSVGHDCSTPLELQQNKREFRVGGAPPPQFSTEIGDPPPRLVSDLKEKKGEEEKKKKERKKEKSGRPQWAAGATRTKEEGDGEGR
RWRGERRWGRKKEREFF