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Lag0001379 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001379
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr4:30495960..30496615
RNA-Seq ExpressionLag0001379
SyntenyLag0001379
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]1.5e-1441.9Show/hide
Query:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE
        +  PRI+NW AD QPKWKDL++KVF+S  LE+ PMLAT +E+ M +F PF++ E +  +E E E  K K+  ++  ++LN+  P+  E    R  ++ IE
Subjt:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE

Query:  KNLNR
         +  R
Subjt:  KNLNR

KAA0062455.1 protein Ycf2-like [Cucumis melo var. makuwa]2.0e-1441.8Show/hide
Query:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL
        P ILNW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M +F PF++ E +  +E E E  K K+  ++  ++LNR  P+  E    R  ++ IE N 
Subjt:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL

Query:  NRKLDQEATEFEKEMEDLEEEQ
         ++++    E E  ME +  +Q
Subjt:  NRKLDQEATEFEKEMEDLEEEQ

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]1.5e-1441.9Show/hide
Query:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE
        +  PRI+NW AD QPKWKDL++KVF+S  LE+ PMLAT +E+ M +F PF++ E +  +E E E  K K+  ++  ++LN+  P+  E    R  ++ IE
Subjt:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE

Query:  KNLNR
         +  R
Subjt:  KNLNR

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]6.9e-1543.81Show/hide
Query:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE
        +  PRI+NW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M YF PF++ E +  +E E E  K K+  ++  ++LNR  P+          +D IE
Subjt:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE

Query:  KNLNR
         +  R
Subjt:  KNLNR

XP_008450225.1 PREDICTED: protein Ycf2-like [Cucumis melo]2.0e-1441.8Show/hide
Query:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL
        P ILNW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M +F PF++ E +  +E E E  K K+  ++  ++LNR  P+  E    R  ++ IE N 
Subjt:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL

Query:  NRKLDQEATEFEKEMEDLEEEQ
         ++++    E E  ME +  +Q
Subjt:  NRKLDQEATEFEKEMEDLEEEQ

TrEMBL top hitse value%identityAlignment
A0A1S3BNT0 protein Ycf2-like9.8e-1541.8Show/hide
Query:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL
        P ILNW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M +F PF++ E +  +E E E  K K+  ++  ++LNR  P+  E    R  ++ IE N 
Subjt:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL

Query:  NRKLDQEATEFEKEMEDLEEEQ
         ++++    E E  ME +  +Q
Subjt:  NRKLDQEATEFEKEMEDLEEEQ

A0A5A7V9A2 Protein Ycf2-like9.8e-1541.8Show/hide
Query:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL
        P ILNW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M +F PF++ E +  +E E E  K K+  ++  ++LNR  P+  E    R  ++ IE N 
Subjt:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL

Query:  NRKLDQEATEFEKEMEDLEEEQ
         ++++    E E  ME +  +Q
Subjt:  NRKLDQEATEFEKEMEDLEEEQ

A0A5D3DKA6 Protein Ycf2-like1.3e-1439.85Show/hide
Query:  MMSRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDS
        + +  PRI+NW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M +F PF++ E +  +E E E  K K+  ++  ++LNR  P+             
Subjt:  MMSRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDS

Query:  IEKNLNRKLDQEATEFEKEMEDLEEEQKEMEHE
         E N+ RK+   A  FE+ ++ +EE+Q+E + E
Subjt:  IEKNLNRKLDQEATEFEKEMEDLEEEQKEMEHE

A0A5D3DVJ7 Protein Ycf2-like9.8e-1541.8Show/hide
Query:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL
        P ILNW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M +F PF++ E +  +E E E  K K+  ++  ++LNR  P+  E    R  ++ IE N 
Subjt:  PRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNL

Query:  NRKLDQEATEFEKEMEDLEEEQ
         ++++    E E  ME +  +Q
Subjt:  NRKLDQEATEFEKEMEDLEEEQ

A0A5D3E3E8 Protein Ycf2-like3.4e-1543.81Show/hide
Query:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE
        +  PRI+NW ADTQPKWKDL++KVF+S  LE+ PMLAT  E+ M YF PF++ E +  +E E E  K K+  ++  ++LNR  P+          +D IE
Subjt:  SRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIE

Query:  KNLNR
         +  R
Subjt:  KNLNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCGCGAGCTCCAAGGATTCTGAATTGGTTTGCTGACACACAACCAAAATGGAAAGACTTAGAAAGGAAGGTGTTCGAGTCTAGTGAGTTGGAGATATACCCTAT
GCTTGCTACTGAAGAGGAAATGGAAATGGCTTACTTTAAGCCTTTTGTTGATAACGAAGTTGAGTTTAGAAGAGAGTTGGAAAAGGAGCAAACAAAACAGAAGTCTGGAG
CCAATCTAATAGACTTAACTTTGAATAGATCGGCACCAACTATTCTTGAAAATTGCTACAGAAGGGATAGACTAGATTCCATAGAGAAGAACCTAAACAGAAAATTAGAT
CAAGAAGCAACCGAGTTTGAAAAAGAGATGGAAGATTTGGAAGAAGAACAAAAAGAGATGGAACATGAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTCGCGAGCTCCAAGGATTCTGAATTGGTTTGCTGACACACAACCAAAATGGAAAGACTTAGAAAGGAAGGTGTTCGAGTCTAGTGAGTTGGAGATATACCCTAT
GCTTGCTACTGAAGAGGAAATGGAAATGGCTTACTTTAAGCCTTTTGTTGATAACGAAGTTGAGTTTAGAAGAGAGTTGGAAAAGGAGCAAACAAAACAGAAGTCTGGAG
CCAATCTAATAGACTTAACTTTGAATAGATCGGCACCAACTATTCTTGAAAATTGCTACAGAAGGGATAGACTAGATTCCATAGAGAAGAACCTAAACAGAAAATTAGAT
CAAGAAGCAACCGAGTTTGAAAAAGAGATGGAAGATTTGGAAGAAGAACAAAAAGAGATGGAACATGAGAAATAG
Protein sequenceShow/hide protein sequence
MMSRAPRILNWFADTQPKWKDLERKVFESSELEIYPMLATEEEMEMAYFKPFVDNEVEFRRELEKEQTKQKSGANLIDLTLNRSAPTILENCYRRDRLDSIEKNLNRKLD
QEATEFEKEMEDLEEEQKEMEHEK