; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001389 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001389
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase core domain containing protein
Genome locationchr4:30671419..30671763
RNA-Seq ExpressionLag0001389
SyntenyLag0001389
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]3.2e-4587.27Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        MTPEVATQVMG+ENA DLW AIQELFGVQS+AEEDYLRQVFQQ RKGSLKM+D+LRVMKSHADNLGQAGSPV TRSLISQVLLGLDEE+NPVVA IQG+ 
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAE
        GI+W EMQAE
Subjt:  GITWSEMQAE

XP_038896600.1 uncharacterized protein LOC120084860 [Benincasa hispida]4.6e-3669.3Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        M  +VA Q+MG+E AK+LW AIQELFGVQSRAEEDYLRQ+FQQ RKG  KMS YL++MK H+DNL Q  SPV+TR+LISQVLLGLDEE+N VV  IQG+ 
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
        GI+W +MQ+ELL +
Subjt:  GITWSEMQAELLVF

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]6.5e-3873.68Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        MT EVA QVMG+EN K LW AIQELFG+QSRA EDYLRQVFQQ  KG++KM +YLRVMK+H+DNLG  GSPV TR+L+SQVLLGLDEEFNP VA IQGR 
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
         I+W+ MQ ELL F
Subjt:  GITWSEMQAELLVF

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]1.4e-3568.42Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        MTPEVA QVMG E AKDLW +I +LFGVQSR EEDYLR VFQ  RKG+LKM +YL+ MK + DNL QAGSP+  R+L+SQVLLGLDEE+N +VAMIQGRV
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
         ++W +MQ+ELL++
Subjt:  GITWSEMQAELLVF

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]1.4e-3568.42Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        MTPEVA QVMG E AKDLW +I +LFGVQSR EEDYLR VFQ  RKG+LKM +YL+ MK + DNL QAGSP+  R+L+SQVLLGLDEE+N +VAMIQGRV
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
         ++W +MQ+ELL++
Subjt:  GITWSEMQAELLVF

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein8.0e-3462.28Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        +TPEV  Q++GF NAKD+W A  + FGV+SRAEED+LRQ FQ  RKG+  M DYLR+MK++ADNLGQA SP+  R+LISQVLLGLDE +NPV+ +IQG+ 
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
         I+W +MQ++LL+F
Subjt:  GITWSEMQAELLVF

A0A5A7SIT7 Uncharacterized protein5.2e-3363.16Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        MTP+VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q  RKG+ KM +YL VMK++ DNLGQ GSPV  R+LISQVLLGLDE +N V+ +IQG+ 
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
         I+W +MQ++LL+F
Subjt:  GITWSEMQAELLVF

A0A5D3E3L7 Uncharacterized protein1.2e-3466.67Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        M P+VA Q+MGF  AKDLW AIQ LFG++SRAEE +LR  FQ  R+G+ KM DYLR+MK +ADNLGQAGSPV  R LISQVLLGLDE +NPV A+IQG+ 
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
         I+W +MQ+ELL+F
Subjt:  GITWSEMQAELLVF

A0A6J1D5J0 uncharacterized protein LOC1110175011.6e-4587.27Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        MTPEVATQVMG+ENA DLW AIQELFGVQS+AEEDYLRQVFQQ RKGSLKM+D+LRVMKSHADNLGQAGSPV TRSLISQVLLGLDEE+NPVVA IQG+ 
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAE
        GI+W EMQAE
Subjt:  GITWSEMQAE

A0A6J1DCW4 uncharacterized protein LOC1110195984.2e-3564.91Show/hide
Query:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV
        M  +VA QVMGF  +++LW A+QELFGVQSRAE DYL+QVFQQ  KGSL+M +YL++MKSHADNL  AGS V+ R L+SQVL GLDEE+NP+V  +QG+V
Subjt:  MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRV

Query:  GITWSEMQAELLVF
         ++WSEM AELL +
Subjt:  GITWSEMQAELLVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)5.3e-0630.59Show/hide
Query:  AKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGR
        ++D+W+ I+  F     A    L    +    G ++++DY R MK  AD+L     PV  R+L+  VL GL+ +F+ ++ +I+ R
Subjt:  AKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCTGAGGTAGCTACTCAGGTCATGGGCTTCGAGAACGCGAAGGATTTGTGGATGGCGATACAAGAACTGTTTGGTGTCCAATCTCGGGCTGAGGAAGATTATCT
TCGTCAGGTATTTCAACAATGTCGAAAAGGTTCTCTTAAAATGTCTGACTATTTGCGCGTTATGAAATCTCACGCAGATAACTTGGGACAAGCCGGCAGTCCAGTCAATA
CTCGATCTTTGATTTCTCAAGTTCTTTTGGGACTTGATGAAGAGTTTAATCCCGTAGTCGCTATGATTCAAGGGAGAGTTGGCATAACGTGGTCTGAGATGCAGGCCGAA
CTTCTTGTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACCTGAGGTAGCTACTCAGGTCATGGGCTTCGAGAACGCGAAGGATTTGTGGATGGCGATACAAGAACTGTTTGGTGTCCAATCTCGGGCTGAGGAAGATTATCT
TCGTCAGGTATTTCAACAATGTCGAAAAGGTTCTCTTAAAATGTCTGACTATTTGCGCGTTATGAAATCTCACGCAGATAACTTGGGACAAGCCGGCAGTCCAGTCAATA
CTCGATCTTTGATTTCTCAAGTTCTTTTGGGACTTGATGAAGAGTTTAATCCCGTAGTCGCTATGATTCAAGGGAGAGTTGGCATAACGTGGTCTGAGATGCAGGCCGAA
CTTCTTGTTTTTTAG
Protein sequenceShow/hide protein sequence
MTPEVATQVMGFENAKDLWMAIQELFGVQSRAEEDYLRQVFQQCRKGSLKMSDYLRVMKSHADNLGQAGSPVNTRSLISQVLLGLDEEFNPVVAMIQGRVGITWSEMQAE
LLVF