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Lag0001422 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001422
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:31083965..31084519
RNA-Seq ExpressionLag0001422
SyntenyLag0001422
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005135 - Endonuclease/exonuclease/phosphatase
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023881716.1 uncharacterized protein LOC111994088 [Quercus suber]3.9e-3250.72Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD--KRWRYTGFYGNP
        +GNP T++AL+  + +  P L+FLMETK +   MD  KRK+  Q  + V    ++GGLALLW + L + I +YS  HID+ I  +   K+WR+TGFYG+P
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD--KRWRYTGFYGNP

Query:  ETSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEK
        +T  REESW LLE L++ SNLPW+  GD+NEIMF KEK
Subjt:  ETSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEK

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]1.7e-3251.45Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD--KRWRYTGFYGNP
        +GNPRT+R L+  ++K  P ++FL+ETK  A+AM+  + KLG Q C TVD  G SGGLALLW   + L I S+S+GH+DS I  +     W +TGFYGNP
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD--KRWRYTGFYGNP

Query:  ETSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEK
          SLR +SW LL RL +  +LPW+  GDFNEI++  EK
Subjt:  ETSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEK

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]2.0e-3351.45Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKR-WRYTGFYGNPE
        +GNP  IRALR  I +  PDL+FL ETK S K MD+ K KLG+ NC +VDS+G+SGGL LLW+  L + + S+S+ HID  IK  D   WR+TG YG+P+
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKR-WRYTGFYGNPE

Query:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKR
        TS R  +W L+  L+++  LPW++GGD NE++   EKR
Subjt:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKR

XP_042973125.1 uncharacterized protein LOC122304929 [Carya illinoinensis]1.0e-3248.2Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKR--WRYTGFYGNP
        +GNPR IRALR  ++K  PD++FL ETK S++ MD  K ++G+ NC+T+D +G+SGGL+LLW   ++L+I S+SK HID+ +K  D    W+ TG YG+P
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKR--WRYTGFYGNP

Query:  ETSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKR
        ET+ REE+W L+  L+  ++  W++ GDFNEI    EK+
Subjt:  ETSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKR

XP_042980077.1 uncharacterized protein LOC122310261 [Carya illinoinensis]1.3e-3250Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKR-WRYTGFYGNPE
        +GNP  IRALR  I +  PDL+FL ETK   K MD+ KRKLG+ NC +VDS+G+SGGL LLW+  L + + S+SK HID  IK  D   WR+TG YG+P+
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKR-WRYTGFYGNPE

Query:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKR
           R  +W L+  L+++  +PW++GGD NE++   EKR
Subjt:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKR

TrEMBL top hitse value%identityAlignment
A0A2N9EV35 Uncharacterized protein8.4e-3346.36Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD-KRWRYTGFYGNPE
        +GNP  +R+L + ++   P ++FLMETK   + M+  + KLGY N  TV S G+SGGLALLW++ + L+I +++  HIDS ++  D K WR T F G PE
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD-KRWRYTGFYGNPE

Query:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIF
           + ESW LL+ LN L N+PW+  GDFNEIM + EKR     SL+K   F
Subjt:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIF

A0A2N9GL12 Reverse transcriptase domain-containing protein8.4e-3346.36Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD-KRWRYTGFYGNPE
        +GNP  +R+L + ++   P ++FLMETK   + M+  + KLGY N  TV S G+SGGLALLW++ + L+I +++  HIDS ++  D K WR T F G PE
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKD-KRWRYTGFYGNPE

Query:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIF
           + ESW LL+ LN L N+PW+  GDFNEIM + EKR     SL+K   F
Subjt:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIF

A0A2N9GLL3 Reverse transcriptase domain-containing protein1.6e-3146.45Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDK-RWRYTGFYGNPE
        +GN RTIR L H +R  +P ++FLMETK     M + K  LG+ N + V S G+SGG+AL+W + +DL I +YS  HID+ I+      WR TGFYG PE
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDK-RWRYTGFYGNPE

Query:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIFVKLL
         S++ ESW LL  L +L NLPW+  GDFNEI+ + EKR   +  L +   F + L
Subjt:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIFVKLL

A0A2N9I5D8 Uncharacterized protein1.9e-3248.34Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDK-RWRYTGFYGNPE
        +GNP+ IRAL   ++   P ++FL+ETK     M   + +LG+ N + V S G+SGGLA+LW D ++L+I SYS  HIDS IK  D   WR+TGFYG PE
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDK-RWRYTGFYGNPE

Query:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIF
           + ESW LLE L ++ +LPW+  GDFNEI+ + EKR  L  SL K   F
Subjt:  TSLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIF

A0A6J1DUG8 uncharacterized protein LOC1110241351.6e-3152.94Show/hide
Query:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKRWRYTGFYGNPET
        +GNP T R LR+ +R++ P L+FL ETK +       KR+L +  C++V S GKSGGL LLW+   ++ I S S GHIDS I  K   WR+TGFYGNP T
Subjt:  MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKRWRYTGFYGNPET

Query:  SLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEK
          R  SW LLERL  + +LPWIIGGDFNEI+   EK
Subjt:  SLREESWTLLERLNNLSNLPWIIGGDFNEIMFEKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACCCTCGGACGATCCGGGCGTTGCGGCATGAGATCCGCAAAAATTCTCCAGATTTAATCTTTCTTATGGAAACAAAATGTTCTGCTAAAGCTATGGATAGCCA
CAAGCGAAAGTTGGGATACCAAAATTGTATGACAGTTGACAGCCAAGGAAAAAGTGGCGGTTTGGCCTTATTATGGAGCGATCATCTTGACCTCTCCATCATTTCTTACT
CAAAAGGCCACATTGACTCCACCATAAAACACAAAGATAAGCGGTGGCGTTACACGGGATTCTATGGAAATCCTGAAACTAGTCTAAGAGAGGAGTCCTGGACCCTCCTA
GAGAGACTAAACAACTTGAGCAATCTGCCTTGGATTATCGGAGGCGATTTCAATGAAATTATGTTTGAAAAGGAAAAAAGGGAGGAGCTTCTAGAAAGCTTAAGCAAATC
AACGATTTTTGTGAAGTTATTAATTCATGTGGTCTTGTGGATGCAGGTTTCAATGGAGATCAATTTACTTGGGCGAGGAATAGAAAAGCAGCAAACTCCATTAAGGAGAG
GCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACCCTCGGACGATCCGGGCGTTGCGGCATGAGATCCGCAAAAATTCTCCAGATTTAATCTTTCTTATGGAAACAAAATGTTCTGCTAAAGCTATGGATAGCCA
CAAGCGAAAGTTGGGATACCAAAATTGTATGACAGTTGACAGCCAAGGAAAAAGTGGCGGTTTGGCCTTATTATGGAGCGATCATCTTGACCTCTCCATCATTTCTTACT
CAAAAGGCCACATTGACTCCACCATAAAACACAAAGATAAGCGGTGGCGTTACACGGGATTCTATGGAAATCCTGAAACTAGTCTAAGAGAGGAGTCCTGGACCCTCCTA
GAGAGACTAAACAACTTGAGCAATCTGCCTTGGATTATCGGAGGCGATTTCAATGAAATTATGTTTGAAAAGGAAAAAAGGGAGGAGCTTCTAGAAAGCTTAAGCAAATC
AACGATTTTTGTGAAGTTATTAATTCATGTGGTCTTGTGGATGCAGGTTTCAATGGAGATCAATTTACTTGGGCGAGGAATAGAAAAGCAGCAAACTCCATTAAGGAGAG
GCTAG
Protein sequenceShow/hide protein sequence
MGNPRTIRALRHEIRKNSPDLIFLMETKCSAKAMDSHKRKLGYQNCMTVDSQGKSGGLALLWSDHLDLSIISYSKGHIDSTIKHKDKRWRYTGFYGNPETSLREESWTLL
ERLNNLSNLPWIIGGDFNEIMFEKEKREELLESLSKSTIFVKLLIHVVLWMQVSMEINLLGRGIEKQQTPLRRG