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Lag0001439 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001439
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:31296751..31297074
RNA-Seq ExpressionLag0001439
SyntenyLag0001439
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572110.1 hypothetical protein SDJN03_28838, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0744.04Show/hide
Query:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRR--GGRDESGGWLAAWLEEAEGHREKDDG
        MDCF   C  S Q  RI  + N RK +KV RD  +V +   +      ++ RRRV   ER+     +SRL+R  GGR ESGGWLAAWLEEAE    +   
Subjt:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRR--GGRDESGGWLAAWLEEAEGHREKDDG

Query:  NKELETCKG
         K LE  +G
Subjt:  NKELETCKG

KAG6589008.1 hypothetical protein SDJN03_17573, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0850.56Show/hide
Query:  VASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRGGRDESGGWLAAWLEEAEGHREKDD
        +AS QV RI+ +E S+K+RK QRD+  VGD   ++   ++R+ +RRV +KE+K  + S +  +RG R+E GGWLAAWLEEAE H EKD+
Subjt:  VASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRGGRDESGGWLAAWLEEAEGHREKDD

KAG6589009.1 hypothetical protein SDJN03_17574, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1350.52Show/hide
Query:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRGGRDESGGWLAAWLEEAEGHREKDD
        M CF   C  S QVPRI  ++ S+K  + Q+D+ +    +A V  +++RQH++RV SKERK +S     L+RGG+ ES GWLAAWLEEAEGH EKD+
Subjt:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRGGRDESGGWLAAWLEEAEGHREKDD

KAG7011763.1 Ubiquitin-conjugating enzyme E2 28 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0443.62Show/hide
Query:  RIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRR--GGRDESGGWLAAWLEEAEGHREKDDGNKELETCKG
        RI  + N RK +KV RD  +V +   +      ++ RRRV   ER+     +SRL+R  GGR ESGGWLAAWLEEAE    +    K LE  +G
Subjt:  RIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRR--GGRDESGGWLAAWLEEAEGHREKDDGNKELETCKG

KGN43248.1 hypothetical protein Csa_020351 [Cucumis sativus]5.7e-1254.29Show/hide
Query:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRG--GRDESGGWLAAWLEEAEGHREKDDG
        M+CF A C   +QV RI ++ ++RK RK++RD+ IV       ++ S + H RRV SKERKM   SSSRL+R    R E GGWLAAWLEEAEG REKD+ 
Subjt:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRG--GRDESGGWLAAWLEEAEGHREKDDG

Query:  NKELE
         KELE
Subjt:  NKELE

TrEMBL top hitse value%identityAlignment
A0A0A0K1A5 Uncharacterized protein2.8e-1254.29Show/hide
Query:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRG--GRDESGGWLAAWLEEAEGHREKDDG
        M+CF A C   +QV RI ++ ++RK RK++RD+ IV       ++ S + H RRV SKERKM   SSSRL+R    R E GGWLAAWLEEAEG REKD+ 
Subjt:  MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRG--GRDESGGWLAAWLEEAEGHREKDDG

Query:  NKELE
         KELE
Subjt:  NKELE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTTTCCGTGCCAATTGTGTCGCATCGCATCAAGTGCCAAGGATTCACAAAAATGAGAACAGCAGGAAGGCAAGAAAAGTCCAAAGAGATAATGGCATAGTTGG
CGATGCCGATGCGTCTGTCGTAGAAGCAAGTGAGAGACAACATCGACGACGGGTAAGCAGTAAGGAGAGAAAGATGTCGTCGTCGTCGTCGTCGAGGCTCCGACGAGGAG
GGAGAGATGAGTCAGGTGGCTGGCTGGCTGCATGGTTGGAAGAGGCTGAAGGGCATAGAGAGAAAGATGATGGAAATAAGGAGTTGGAGACATGCAAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTTTCCGTGCCAATTGTGTCGCATCGCATCAAGTGCCAAGGATTCACAAAAATGAGAACAGCAGGAAGGCAAGAAAAGTCCAAAGAGATAATGGCATAGTTGG
CGATGCCGATGCGTCTGTCGTAGAAGCAAGTGAGAGACAACATCGACGACGGGTAAGCAGTAAGGAGAGAAAGATGTCGTCGTCGTCGTCGTCGAGGCTCCGACGAGGAG
GGAGAGATGAGTCAGGTGGCTGGCTGGCTGCATGGTTGGAAGAGGCTGAAGGGCATAGAGAGAAAGATGATGGAAATAAGGAGTTGGAGACATGCAAAGGCTGA
Protein sequenceShow/hide protein sequence
MDCFRANCVASHQVPRIHKNENSRKARKVQRDNGIVGDADASVVEASERQHRRRVSSKERKMSSSSSSRLRRGGRDESGGWLAAWLEEAEGHREKDDGNKELETCKG