; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001468 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001468
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSingle-stranded DNA-binding protein, mitochondrial
Genome locationchr4:31667539..31668883
RNA-Seq ExpressionLag0001468
SyntenyLag0001468
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF6734224.1 hypothetical protein FQA47_013229 [Oryzias melastigma]4.6e-0831.76Show/hide
Query:  RSNRSSSQQAD-PRDQQANRPIK--KINKSAGRSSKRSTSQPTDQ-EDQQVSRPIIQE-----DQQANKPI-QQIIKPTGRSKRSTSQPTDQEDQQVSRP
        ++N+ + QQ D P +QQ NRP K  + NK   R + R T+Q TD+  +QQ  +P  ++     DQQ NKP  QQ  KPT +  +   Q     ++Q +RP
Subjt:  RSNRSSSQQAD-PRDQQANRPIK--KINKSAGRSSKRSTSQPTDQ-EDQQVSRPIIQE-----DQQANKPI-QQIIKPTGRSKRSTSQPTDQEDQQVSRP

Query:  IIQEINKPTDRSRRSTNHQANRLIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSR-FNRSSSQQAD-PRDHQVSRPIIQED
          +  N+ T+R ++ TN Q NR     N+ TDR     + +   P DQQ  +  ++ NK   R + +  K T+R  NR ++QQ D P + Q ++P  +++
Subjt:  IIQEINKPTDRSRRSTNHQANRLIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSR-FNRSSSQQAD-PRDHQVSRPIIQED

Query:  QQANKP---IQEIINLADRSSKKLDKSAQENQQ
        +Q N+P    ++     D++ K  D+  Q+ ++
Subjt:  QQANKP---IQEIINLADRSSKKLDKSAQENQQ

KOX68120.1 Single-stranded DNA-binding protein, mitochondrial, partial [Melipona quadrifasciata]1.5e-0632.13Show/hide
Query:  QKTQSPEHSAKSPESAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVSRPIIQE-----DQQANKPI
        Q+T  P     S  +  ++S+  ++ TSR   +  Q + P DQQ +RP    ++   R + + TS+P DQ+     DQQ SRP  Q+     DQQ ++P 
Subjt:  QKTQSPEHSAKSPESAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVSRPIIQE-----DQQANKPI

Query:  -QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDR--SRRSTNHQANRLIQEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSAGR
         QQ  +P   + + TS+P DQ+     DQQ SRP  Q+ ++P D+  SR +    +    Q+ ++P D ++ R   QQ   P DQQ +RP  +      +
Subjt:  -QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPTDR--SRRSTNHQANRLIQEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSAGR

Query:  SSRKINKLTSRFNRSSSQQADPRDHQVSRPIIQE-----DQQANKPIQE
        +SR  ++ TSR   +  Q + P D Q SRP  Q+     DQQ ++P  +
Subjt:  SSRKINKLTSRFNRSSSQQADPRDHQVSRPIIQE-----DQQANKPIQE

RUS92128.1 hypothetical protein EGW08_000152 [Elysia chlorotica]1.8e-0431.47Show/hide
Query:  RDQQANRPIKKINKSAGRSSKRSTSQPTDQ-------EDQQVSRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPT
        RD  A  P  K N   G+ +      P  +        DQ+ +RP     QQ N+P  QQ  +PTG   + T++P DQ+     DQQ +RP  Q+ N+PT
Subjt:  RDQQANRPIKKINKSAGRSSKRSTSQPTDQ-------EDQQVSRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPT

Query:  D-RSRRSTNHQANRLI-QEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRFNRSSSQQAD-PRDHQVSRPIIQEDQQANKPI
        D ++ R T+ QANR   Q+ N+PTD ++ R T QQ   P DQQ NRP  +                 + NR + QQ + P D Q +RP    DQQ N+P 
Subjt:  D-RSRRSTNHQANRLI-QEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRFNRSSSQQAD-PRDHQVSRPIIQEDQQANKPI

Query:  QEIINLADRSSKKLDKSAQENQQARDQKASTLIEAPSPAASTIAGRRPTTG
          ++ +   SS +L +     +  R    + L+   + + +    +  TTG
Subjt:  QEIINLADRSSKKLDKSAQENQQARDQKASTLIEAPSPAASTIAGRRPTTG

TrEMBL top hitse value%identityAlignment
A0A433UEB9 Uncharacterized protein8.8e-0531.47Show/hide
Query:  RDQQANRPIKKINKSAGRSSKRSTSQPTDQ-------EDQQVSRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPT
        RD  A  P  K N   G+ +      P  +        DQ+ +RP     QQ N+P  QQ  +PTG   + T++P DQ+     DQQ +RP  Q+ N+PT
Subjt:  RDQQANRPIKKINKSAGRSSKRSTSQPTDQ-------EDQQVSRPIIQEDQQANKPI-QQIIKPTGRSKRSTSQPTDQE-----DQQVSRPIIQEINKPT

Query:  D-RSRRSTNHQANRLI-QEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRFNRSSSQQAD-PRDHQVSRPIIQEDQQANKPI
        D ++ R T+ QANR   Q+ N+PTD ++ R T QQ   P DQQ NRP  +                 + NR + QQ + P D Q +RP    DQQ N+P 
Subjt:  D-RSRRSTNHQANRLI-QEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRFNRSSSQQAD-PRDHQVSRPIIQEDQQANKPI

Query:  QEIINLADRSSKKLDKSAQENQQARDQKASTLIEAPSPAASTIAGRRPTTG
          ++ +   SS +L +     +  R    + L+   + + +    +  TTG
Subjt:  QEIINLADRSSKKLDKSAQENQQARDQKASTLIEAPSPAASTIAGRRPTTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACTTATTTGGAGACAGAGTCAGAAAACTCAGAGTCCAGAGCATTCTGCCAAGAGTCCAGAGTCGGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCG
ATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCC
AACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGA
TCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAATCATCAAGCCAA
CAGGTTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCA
ACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCTAACAAGCCGATTCAATAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATC
ATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAACCTAGCAGACCGATCATCCAAGAAGCTCGACAAATCAGCCCAAGAAAATCAACAAGCTAGAGA
CCAAAAAGCTTCCACCTTAATTGAAGCTCCGTCGCCGGCAGCGTCTACCATCGCCGGCCGTCGGCCGACAACCGGCCACCGGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACTTATTTGGAGACAGAGTCAGAAAACTCAGAGTCCAGAGCATTCTGCCAAGAGTCCAGAGTCGGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCG
ATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCC
AACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGA
TCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAATCATCAAGCCAA
CAGGTTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCA
ACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCTAACAAGCCGATTCAATAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATC
ATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAACCTAGCAGACCGATCATCCAAGAAGCTCGACAAATCAGCCCAAGAAAATCAACAAGCTAGAGA
CCAAAAAGCTTCCACCTTAATTGAAGCTCCGTCGCCGGCAGCGTCTACCATCGCCGGCCGTCGGCCGACAACCGGCCACCGGAACTGA
Protein sequenceShow/hide protein sequence
MPLIWRQSQKTQSPEHSAKSPESAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANKPIQQIIKPTGRSKR
STSQPTDQEDQQVSRPIIQEINKPTDRSRRSTNHQANRLIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRFNRSSSQQADPRDHQVSRPI
IQEDQQANKPIQEIINLADRSSKKLDKSAQENQQARDQKASTLIEAPSPAASTIAGRRPTTGHRN