; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001470 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001470
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransmembrane protein
Genome locationchr4:31683643..31684164
RNA-Seq ExpressionLag0001470
SyntenyLag0001470
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049726.1 hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa]1.2e-5989.92Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG
        M+ YR+RTTADSI+DSLSLNPPPYPVLLLLAVVS+FLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DPSFF SSPWDRRRRTHH+PAEG
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVL+QFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

KAG6588994.1 hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5890.7Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG
        MS+YR+RTTADSI+DSLSLNP PYPVLLLLAVV +FLGASWWLSYESAVEAAEDQINWILFATPVLLI+L R LSSVDPS+F SSPWDRRRRTH LPAEG
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

KGN43227.1 hypothetical protein Csa_020160 [Cucumis sativus]1.2e-5981.94Show/hide
Query:  PSQNSQSPQPKIPKSMSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSS
        P    +   P+   SM+ YRNRTTADSI+DSLSLNPPPYPVLLLLAVVS+FLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DP+FF SS
Subjt:  PSQNSQSPQPKIPKSMSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSS

Query:  PWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESWSI
        PWDRRRRTHH+PAEG+SPWGVAA I+LLLVL+QFQSSFRESWSI
Subjt:  PWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESWSI

XP_022989070.1 uncharacterized protein LOC111486253 [Cucurbita maxima]1.8e-6093.02Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG
        MS+YR+RTTADSI+DSLSLNP PYPVLLLLAVV +FLGASWWLSYESAVEAAEDQINWILFATPVLLI+L RFLSSVDPSFF SSPWDRRRRTHHLPAEG
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

XP_038888316.1 uncharacterized protein LOC120078163 [Benincasa hispida]5.7e-6295.35Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG
        M+ YRNRTTADSI+DSLSLNPPPYPVLLLLAVVS+FLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVR LSSVDPSFF SSPWDRRRRTHHLPAEG
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

TrEMBL top hitse value%identityAlignment
A0A0A0K4L6 Uncharacterized protein5.8e-6081.94Show/hide
Query:  PSQNSQSPQPKIPKSMSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSS
        P    +   P+   SM+ YRNRTTADSI+DSLSLNPPPYPVLLLLAVVS+FLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DP+FF SS
Subjt:  PSQNSQSPQPKIPKSMSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSS

Query:  PWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESWSI
        PWDRRRRTHH+PAEG+SPWGVAA I+LLLVL+QFQSSFRESWSI
Subjt:  PWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESWSI

A0A5A7U6E4 Uncharacterized protein5.8e-6089.92Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG
        M+ YR+RTTADSI+DSLSLNPPPYPVLLLLAVVS+FLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DPSFF SSPWDRRRRTHH+PAEG
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVL+QFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

A0A5N5I8U5 Uncharacterized protein9.3e-4265.38Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFS-SPWDRRRRTHHLPAE
        M++YR R+   S ++  SL+P PYPVLL+LAV+S+FLG SW+ SYESAVE AE Q NW+L  TP+ LI++V+ LSS+DP + FS SPWDRRRRTHH+P+E
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFS-SPWDRRRRTHHLPAE

Query:  GSSPWGVAALIVLLLVLVQFQSSFRESWSI
        GSSPWGVAA I+LLLVL+Q+QSSFR+SW I
Subjt:  GSSPWGVAALIVLLLVLVQFQSSFRESWSI

A0A6J1C2N0 uncharacterized protein LOC1110078956.2e-5486.82Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG
        MS YR R+TADSI+DSLSLNP PYPVLLLL VV VFLGASWW SYESAVEAAE+QINW+LFATPVLLIVLVR LSSVDPSFF SSPW+RRR TH LP EG
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

A0A6J1JLC4 uncharacterized protein LOC1114862538.9e-6193.02Show/hide
Query:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG
        MS+YR+RTTADSI+DSLSLNP PYPVLLLLAVV +FLGASWWLSYESAVEAAEDQINWILFATPVLLI+L RFLSSVDPSFF SSPWDRRRRTHHLPAEG
Subjt:  MSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein8.0e-3059.02Show/hide
Query:  SIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVD-PSFFFSSPWDRRRRTHHLPAE----GSSPWGV
        SI+DS SL+P PYPVLL+LAV SVFL +SW+ S E A E+AE+QIN+ L   P+ LIVLVR+LSS++ P          RR T+  P      GSSPWGV
Subjt:  SIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVD-PSFFFSSPWDRRRRTHHLPAE----GSSPWGV

Query:  AALIVLLLVLVQFQSSFRESWS
        AALIVLLLVL+Q+QSSF E WS
Subjt:  AALIVLLLVLVQFQSSFRESWS

AT2G31940.1 unknown protein2.2e-1131.78Show/hide
Query:  PPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ
        P P  + + + ++ +F+  SW+ SYE  +E    Q    L A+P+LL++ V FLS         +          L   G +PWGVA ++V L  +V +Q
Subjt:  PPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ

Query:  SSFRESW
        S F+E W
Subjt:  SSFRESW

AT5G19875.1 unknown protein1.9e-1540.17Show/hide
Query:  SIIDSLSLNPPPYPVLLLLAVVSVF-LGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEGSSPWGVAALI
        S +D LSL   P P L  L +V  F L  +W+L++ES +E   D +  +   TP+ L++LV F S       F  PW  +   H     GSSPWGVAA++
Subjt:  SIIDSLSLNPPPYPVLLLLAVVSVF-LGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEGSSPWGVAALI

Query:  VLLLVLVQFQSSFRESW
        VL+L +V +QS F+E W
Subjt:  VLLLVLVQFQSSFRESW

AT5G42146.1 unknown protein1.1e-1034.23Show/hide
Query:  LSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVL
        L+ + PP  +L LLA++S+ L  S +  Y+  VE     +   +   P+L + ++  LS V    F SS   R  +   L  EG+ PWGV  +++LLL+L
Subjt:  LSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVL

Query:  VQFQSSFRESW
        V  QS F   W
Subjt:  VQFQSSFRESW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCCATACATCGCCCCACACTGAAGCACACCCCCAATCTCCCTCCCGCTATAAATCCACTGAACTCAACTCTCATTTCTCTCCATCTCAAAATTCTCAGAGCCC
TCAACCAAAAATCCCCAAATCAATGAGCCATTACAGAAACAGAACCACCGCAGATTCAATTATCGATTCTCTCTCCCTCAATCCTCCGCCGTACCCTGTCCTCCTCCTCC
TCGCCGTCGTCTCCGTCTTCCTAGGCGCCTCCTGGTGGCTCTCCTACGAGTCCGCCGTCGAGGCCGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACGCCCGTCCTC
CTCATCGTCCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTCTTTTCCTCGCCGTGGGACCGCCGCCGCCGCACGCACCACCTCCCGGCCGAGGGGAGCTCTCC
CTGGGGCGTCGCAGCGTTGATCGTGTTGCTGCTCGTTCTCGTTCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCCATACATCGCCCCACACTGAAGCACACCCCCAATCTCCCTCCCGCTATAAATCCACTGAACTCAACTCTCATTTCTCTCCATCTCAAAATTCTCAGAGCCC
TCAACCAAAAATCCCCAAATCAATGAGCCATTACAGAAACAGAACCACCGCAGATTCAATTATCGATTCTCTCTCCCTCAATCCTCCGCCGTACCCTGTCCTCCTCCTCC
TCGCCGTCGTCTCCGTCTTCCTAGGCGCCTCCTGGTGGCTCTCCTACGAGTCCGCCGTCGAGGCCGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACGCCCGTCCTC
CTCATCGTCCTCGTCCGATTCCTCTCCTCTGTCGATCCGAGCTTCTTCTTTTCCTCGCCGTGGGACCGCCGCCGCCGCACGCACCACCTCCCGGCCGAGGGGAGCTCTCC
CTGGGGCGTCGCAGCGTTGATCGTGTTGCTGCTCGTTCTCGTTCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATATAG
Protein sequenceShow/hide protein sequence
MAPHTSPHTEAHPQSPSRYKSTELNSHFSPSQNSQSPQPKIPKSMSHYRNRTTADSIIDSLSLNPPPYPVLLLLAVVSVFLGASWWLSYESAVEAAEDQINWILFATPVL
LIVLVRFLSSVDPSFFFSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFRESWSI