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Lag0001482 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001482
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr4:31849948..31850249
RNA-Seq ExpressionLag0001482
SyntenyLag0001482
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0006508 - proteolysis (biological process)
GO:0009451 - RNA modification (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0000774 - adenyl-nucleotide exchange factor activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0004185 - serine-type carboxypeptidase activity (molecular function)
GO:0042803 - protein homodimerization activity (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025038.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2096.55Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWK A SLRREMKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

XP_022151287.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Momordica charantia]3.7e-2093.1Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRR AEKLMEL PQSSSPYVLLSSIYAASENWKGA SLRR+MKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

XP_022935750.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita moschata]1.3e-2096.55Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWK A SLRREMKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

XP_022974928.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita maxima]1.3e-2096.55Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWK A SLRREMKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

XP_023534935.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita pepo subsp. pepo]1.3e-2096.55Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWK A SLRREMKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

TrEMBL top hitse value%identityAlignment
A0A0A0K9P1 Uncharacterized protein3.7e-1887.93Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRG+RAA+KLMELKPQSSS YVLLSSIYA SENW GA SLRREMK KGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

A0A5A7TIQ6 Pentatricopeptide repeat-containing protein1.8e-1784.48Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRG+RAA KLMELKPQSSS YVLLS +YA SENW GA SLRREMK KGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

A0A6J1DD26 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g09040, mitochondrial1.8e-2093.1Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRR AEKLMEL PQSSSPYVLLSSIYAASENWKGA SLRR+MKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

A0A6J1FBI8 pentatricopeptide repeat-containing protein At3g09040, mitochondrial6.1e-2196.55Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWK A SLRREMKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

A0A6J1IHS2 pentatricopeptide repeat-containing protein At3g09040, mitochondrial6.1e-2196.55Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWK A SLRREMKSKGVKKL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

SwissProt top hitse value%identityAlignment
P0C899 Putative pentatricopeptide repeat-containing protein At3g491421.1e-0649.12Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKK
        R H D   G  AA+KL +L P+ S  YVLLS+IYA +  W+   ++R  MKSKG+KK
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKK

Q1PFA6 Pentatricopeptide repeat-containing protein At2g027501.3e-0748.28Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        R+H D V G  AA KL EL+P++ +P+V+LSSIYAA E W+   S+R+ +  K + KL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

Q9SKQ4 Pentatricopeptide repeat-containing protein At2g210903.4e-0846.27Show/hide
Query:  ILG--RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKLRDIA
        ILG  R HG+E  G++AA++L++L P+SS+PY+LLSSIYA    W+    LR  MK + V K + ++
Subjt:  ILG--RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKLRDIA

Q9SS83 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial8.6e-1256.9Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        R HGD++RG  +AEKL+EL+PQ+SS YVLLS+IYA+   W+ A++LR+ M+ +GVKK+
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

Q9SY02 Pentatricopeptide repeat-containing protein At4g027502.4e-0643.1Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        R HG+      AA+K+  ++P++S  YVLLS++YA+S  W     LR  M+ KGVKK+
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

Arabidopsis top hitse value%identityAlignment
AT2G02750.1 Pentatricopeptide repeat (PPR) superfamily protein9.1e-0948.28Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        R+H D V G  AA KL EL+P++ +P+V+LSSIYAA E W+   S+R+ +  K + KL
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

AT2G21090.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.4e-0946.27Show/hide
Query:  ILG--RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKLRDIA
        ILG  R HG+E  G++AA++L++L P+SS+PY+LLSSIYA    W+    LR  MK + V K + ++
Subjt:  ILG--RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKLRDIA

AT3G09040.1 Pentatricopeptide repeat (PPR) superfamily protein6.1e-1356.9Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL
        R HGD++RG  +AEKL+EL+PQ+SS YVLLS+IYA+   W+ A++LR+ M+ +GVKK+
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKL

AT3G49142.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.7e-0849.12Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKK
        R H D   G  AA+KL +L P+ S  YVLLS+IYA +  W+   ++R  MKSKG+KK
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKK

AT3G61170.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.7e-0847.37Show/hide
Query:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKK
        RKHG+   G RAA+ LMEL+P ++ PYV LS++Y+A+     A ++RR MKS+ + K
Subjt:  RKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGACATTCTTGGGAGAAAACATGGAGATGAAGTTAGGGGGAGGCGTGCAGCTGAGAAACTTATGGAGTTGAAACCACAAAGTTCTTCACCCTATGTGTTGCTTTC
TAGCATATACGCTGCATCAGAGAATTGGAAAGGAGCTCACTCTTTAAGGAGGGAAATGAAATCAAAGGGAGTGAAAAAGTTGCGGGATATAGCTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGACATTCTTGGGAGAAAACATGGAGATGAAGTTAGGGGGAGGCGTGCAGCTGAGAAACTTATGGAGTTGAAACCACAAAGTTCTTCACCCTATGTGTTGCTTTC
TAGCATATACGCTGCATCAGAGAATTGGAAAGGAGCTCACTCTTTAAGGAGGGAAATGAAATCAAAGGGAGTGAAAAAGTTGCGGGATATAGCTGGATAG
Protein sequenceShow/hide protein sequence
MVDILGRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYAASENWKGAHSLRREMKSKGVKKLRDIAG