; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001508 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001508
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:32141995..32147148
RNA-Seq ExpressionLag0001508
SyntenyLag0001508
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO61345.1 reverse transcriptase [Corchorus capsularis]1.1e-2631.69Show/hide
Query:  TMDVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFD
        T  + D      L+++E+  +      + E  A+  NCL+GK++S+R +N++  R  M  VW     + +  +G+NLF+   +S   ++R+ +++PW F+
Subjt:  TMDVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFD

Query:  GNLILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
          L++LK+   +D  E+I  D   FW Q H+LPLG  N+++ + +G   G V+ ID       WG+FLR R ++ + +PL RG
Subjt:  GNLILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

XP_023915780.1 uncharacterized protein At4g02000-like [Quercus suber]7.6e-2835.91Show/hide
Query:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN
        D+  + +   L  KES     S + LP       + LV K+ ++R +N++A  KT+ ++W   R   + ++G N  LI  +  +   +++ + PW FD  
Subjt:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN

Query:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
        L+ L  PT  +L ++  FD+  FWVQ HNLPL   N T A+ +G  +GIV+ +D +   EC GR+LRVRI++ I +PLCRG
Subjt:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

XP_035547260.1 uncharacterized protein LOC118348857 [Juglans regia]5.4e-2635.26Show/hide
Query:  LKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLILLKAPT
        L LS+KE   I+     L  N A+ + CLV  ++  R  N +A + TM  VW    ++   N+G NLFL+  +    + RI +E+PW FD  L+LLK   
Subjt:  LKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLILLKAPT

Query:  TFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
              +I   E  FW++ +++PL   N  V + +G++IGIV+ +D  + +  WG +LR+R+K+ I +PL RG
Subjt:  TFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

XP_040990949.1 uncharacterized protein LOC121238174 [Juglans microcarpa x Juglans regia]7.6e-2835.91Show/hide
Query:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN
        D+ +  +   L+++E   I  ++  +  N  + + CLVG+V++ + IN +AF+ TM  VW  C    I  VGDNL++   Q+    +RI    PW FD N
Subjt:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN

Query:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
        L+ LK       P E+ F+    WVQ HNLPLG  N  +   +GS IG V  ++ +    CWG+++RV+I+M + +PL RG
Subjt:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

XP_042941294.1 uncharacterized protein LOC122275977 [Carya illinoinensis]2.2e-2734.25Show/hide
Query:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN
        D+ D+   L+L+++E+  I+ + + L   +AK    LVGK++S R +N +  R TM N+W      +  ++  NLF++   +   + R+++  PW FD  
Subjt:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN

Query:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
        L+LLK    F LP+++ FD   FWV  +NLPL   N  V   +G  IG V+ +D+ E    WGR+LRV+I++ + + + RG
Subjt:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

TrEMBL top hitse value%identityAlignment
A0A1R3GTB5 Reverse transcriptase5.3e-2731.69Show/hide
Query:  TMDVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFD
        T  + D      L+++E+  +      + E  A+  NCL+GK++S+R +N++  R  M  VW     + +  +G+NLF+   +S   ++R+ +++PW F+
Subjt:  TMDVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFD

Query:  GNLILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
          L++LK+   +D  E+I  D   FW Q H+LPLG  N+++ + +G   G V+ ID       WG+FLR R ++ + +PL RG
Subjt:  GNLILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

A0A1R3KUZ6 DUF4283 domain-containing protein6.5e-2532.58Show/hide
Query:  DKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLIL
        D      L+++E + +      +     + + CL+GK++S+R +NI+  R  +  VW     + I  VGD LF+   +    +DR+ ++SPW F+  L++
Subjt:  DKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLIL

Query:  LKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
        L     F   E +  +E  FWVQ H+LPLGL N+ + + +GS +G+V+ +D       W  FLRVR++++I +PL RG
Subjt:  LKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

A0A2I4EU18 uncharacterized protein LOC1089927271.7e-2532.04Show/hide
Query:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN
        D+      L L+++ES  +   E  +     + + CL+GK+++++ +N DAF+ TM  +W     ++I +VG NLFL    + +   ++ +  PW FD  
Subjt:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN

Query:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
        L+ +K       P  + F     W+Q HNLP G  N  +   LGS +G V  ++ +EM  CWGR+LRV +++    PL RG
Subjt:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

A0A2I4EX97 uncharacterized protein LOC1089935193.8e-2533.15Show/hide
Query:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN
        D+  +   LKL++KES  ++  +    E + K +  LVGK+  +R I+      TM  VW   R+     VG N F+I   + + + RI++  PW FD  
Subjt:  DVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGN

Query:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
        L ++     F  P+++ F   +FWVQFH+LP+   N    + LG  +G V  +++ E    WG FLR+ I+++I++PL RG
Subjt:  LILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

A0A6P9EG34 uncharacterized protein LOC1183488572.6e-2635.26Show/hide
Query:  LKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLILLKAPT
        L LS+KE   I+     L  N A+ + CLV  ++  R  N +A + TM  VW    ++   N+G NLFL+  +    + RI +E+PW FD  L+LLK   
Subjt:  LKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLILLKAPT

Query:  TFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG
              +I   E  FW++ +++PL   N  V + +G++IGIV+ +D  + +  WG +LR+R+K+ I +PL RG
Subjt:  TFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding7.9e-0722.6Show/hide
Query:  QNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLILLKA-PTTFDLPEEIIFDEPQFWVQFHNLPL
        + C++ KV+  + I I    + +  +W     +++ ++    F+I  +        +   PW   GN +L++   + FD   + I   P  WV+  N+P 
Subjt:  QNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSISGRDRIVEESPWCFDGNLILLKA-PTTFDLPEEIIFDEPQFWVQFHNLPL

Query:  GLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPL
           +  +   +   +G   ++DMN ++   GRF RV I++ + +PL
Subjt:  GLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTGATTTTATTCTCTCACTGTACACGAACAGAGGCCTTTTTCCTGATTTTGAAGAAGAAGAATGGGGGGGGATTGGTTTCAAAGAAGGAGAAGGTGGTGGTGG
AGGGCGACGGCGACAACAAGGGACTACAATGGCGGCGGTTGGGTTAGATTTAGGTGGGGTGGGGGTAGGTTCATTTGAAGAAGAAGAAGCAGCAGCTCCGACGGGGAGGA
GGCTCCAGTGGTGGCGGCGACGCCGTAAAGAGAAGAAGAAGAAATTGAAGGGGAAGGAGAGGGGGATGAGCTCACCGGAGAAGAAAAGCTGTCGTCGTTGCCACCGGGGA
AGAAAGAAGAAGGAAGGGGAAGGAGAAGGGGCCACGACCTGTCTTCCTCCTTCTTTCGAAGGATTTTTGCCAACCATGGATGTAATCGATAAGCTTTCAGCGCTCAAACT
TTCGCAAAAGGAATCTAACGGAATAAACACATCAGAGCTAGGCTTACCTGAAAACCAAGCTAAGCTCCAAAATTGTTTGGTAGGAAAGGTTGTATCTCAAAGAACTATCA
ACATTGACGCTTTTCGGAAAACTATGACAAATGTATGGCATTTCTGTCGGAGGATTTCCATTGATAACGTTGGGGACAACCTCTTTCTTATCAATCCACAATCCATTTCG
GGAAGAGACAGAATTGTGGAAGAGAGCCCGTGGTGTTTTGATGGTAACTTGATTCTACTCAAAGCTCCAACAACTTTTGATTTGCCGGAAGAAATCATTTTTGATGAACC
ACAATTTTGGGTTCAATTCCACAATCTTCCGCTTGGTTTACGGAATGACACAGTGGCACAAACGCTTGGGAGCCGAATTGGAATTGTTCAGAGAATTGATATGAATGAAA
TGGATGAGTGTTGGGGTCGTTTTCTTCGAGTTCGAATCAAGATGAAGATTGACGAGCCTTTATGTAGGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTGATTTTATTCTCTCACTGTACACGAACAGAGGCCTTTTTCCTGATTTTGAAGAAGAAGAATGGGGGGGGATTGGTTTCAAAGAAGGAGAAGGTGGTGGTGG
AGGGCGACGGCGACAACAAGGGACTACAATGGCGGCGGTTGGGTTAGATTTAGGTGGGGTGGGGGTAGGTTCATTTGAAGAAGAAGAAGCAGCAGCTCCGACGGGGAGGA
GGCTCCAGTGGTGGCGGCGACGCCGTAAAGAGAAGAAGAAGAAATTGAAGGGGAAGGAGAGGGGGATGAGCTCACCGGAGAAGAAAAGCTGTCGTCGTTGCCACCGGGGA
AGAAAGAAGAAGGAAGGGGAAGGAGAAGGGGCCACGACCTGTCTTCCTCCTTCTTTCGAAGGATTTTTGCCAACCATGGATGTAATCGATAAGCTTTCAGCGCTCAAACT
TTCGCAAAAGGAATCTAACGGAATAAACACATCAGAGCTAGGCTTACCTGAAAACCAAGCTAAGCTCCAAAATTGTTTGGTAGGAAAGGTTGTATCTCAAAGAACTATCA
ACATTGACGCTTTTCGGAAAACTATGACAAATGTATGGCATTTCTGTCGGAGGATTTCCATTGATAACGTTGGGGACAACCTCTTTCTTATCAATCCACAATCCATTTCG
GGAAGAGACAGAATTGTGGAAGAGAGCCCGTGGTGTTTTGATGGTAACTTGATTCTACTCAAAGCTCCAACAACTTTTGATTTGCCGGAAGAAATCATTTTTGATGAACC
ACAATTTTGGGTTCAATTCCACAATCTTCCGCTTGGTTTACGGAATGACACAGTGGCACAAACGCTTGGGAGCCGAATTGGAATTGTTCAGAGAATTGATATGAATGAAA
TGGATGAGTGTTGGGGTCGTTTTCTTCGAGTTCGAATCAAGATGAAGATTGACGAGCCTTTATGTAGGGGTTAA
Protein sequenceShow/hide protein sequence
MGADFILSLYTNRGLFPDFEEEEWGGIGFKEGEGGGGGRRRQQGTTMAAVGLDLGGVGVGSFEEEEAAAPTGRRLQWWRRRRKEKKKKLKGKERGMSSPEKKSCRRCHRG
RKKKEGEGEGATTCLPPSFEGFLPTMDVIDKLSALKLSQKESNGINTSELGLPENQAKLQNCLVGKVVSQRTINIDAFRKTMTNVWHFCRRISIDNVGDNLFLINPQSIS
GRDRIVEESPWCFDGNLILLKAPTTFDLPEEIIFDEPQFWVQFHNLPLGLRNDTVAQTLGSRIGIVQRIDMNEMDECWGRFLRVRIKMKIDEPLCRG