; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001540 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001540
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger protein GIS2
Genome locationchr4:32610384..32612277
RNA-Seq ExpressionLag0001540
SyntenyLag0001540
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148537.1 zinc finger protein GIS2 [Cucumis sativus]4.4e-15195.77Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+PRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_008448055.1 PREDICTED: zinc finger protein GIS2 [Cucumis melo]9.0e-15296.54Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022136056.1 zinc finger protein GIS2 [Momordica charantia]1.8e-15297.32Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRF+YRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSN+L DR DRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        SVRGG+ GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022971383.1 zinc finger protein GIS2-like [Cucurbita maxima]9.0e-15296.54Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+A+SC N
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+RGG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_038887879.1 zinc finger protein GIS2 [Benincasa hispida]4.8e-15396.92Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RGGA GYRDVVCRNCQQLGHMSRDCMGPL+ICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

TrEMBL top hitse value%identityAlignment
A0A0A0K138 Uncharacterized protein2.2e-15195.77Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+PRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A1S3BIU7 zinc finger protein GIS24.3e-15296.54Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1C2F8 zinc finger protein GIS28.7e-15397.32Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSPL+RKIRSDRF+YRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSN+L DR DRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        SVRGG+ GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1EYM8 zinc finger protein GIS2-like3.1e-15095.79Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+A+SC N
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+R GG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1I6P4 zinc finger protein GIS2-like4.3e-15296.54Show/hide
Query:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+A+SC N
Subjt:  MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+RGG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

SwissProt top hitse value%identityAlignment
O42395 Cellular nucleic acid-binding protein1.5e-2136.09Show/hide
Query:  NLCKNCKRPGHFARECPN-----------------------VAICHNCGLPGHIASECTTK--SLCWNCREPGHMANSC-----PNEGICHTCGKAGHRA
        N C  C R GH+ARECP                          IC+ CG  GH+A +C  +    C+NC   GH+A  C       E  C+ CGK GH A
Subjt:  NLCKNCKRPGHFARECPN-----------------------VAICHNCGLPGHIASECTTK--SLCWNCREPGHMANSC-----PNEGICHTCGKAGHRA

Query:  RECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC
        R+C        D + C +C + GHI  DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Subjt:  RECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC

P36627 Cellular nucleic acid-binding protein homolog3.4e-2132.28Show/hide
Query:  CHNCGLPGHIASECTTKSLCWNCREPGHMANSC---PNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC
        C+NCG  GH A ECT  S+C+NC + GH A+ C     E  C+ CG AGH  R+C + P P      C  C + GHIA DC      +  R  GH     
Subjt:  CHNCGLPGHIASECTTKSLCWNCREPGHMANSC---PNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC

Query:  PNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS
         ++  C  C   GH AR C                              V C +C ++GH S +C       +C+ C   GH+A  C S
Subjt:  PNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS

P53849 Zinc finger protein GIS26.7e-2535.57Show/hide
Query:  CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTK-----SLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRL-CNNCYKQGHIA
        C  C + GH A +C +  +C+NC  PGH+ ++CT         C+NC E GH+ + C  +  C  C + GH +REC  P       ++ C  C    H+A
Subjt:  CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTK-----SLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRL-CNNCYKQGHIA

Query:  ADCTNEKA-----CNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKS
         DC  E       C  C + GH++RDC ND +C  CN +GH+++ CPK+
Subjt:  ADCTNEKA-----CNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKS

Q04832 DNA-binding protein HEXBP4.5e-2929.93Show/hide
Query:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKS--------LCWNCREPGHMANSCPNEG--------ICHTCGKAGHRARECT----
        C+NC + GH+ARECP            C  CG  GH++ EC  ++         C+ C E GHM+  CPN           C+ CG+ GH +R+C     
Subjt:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKS--------LCWNCREPGHMANSCPNEG--------ICHTCGKAGHRARECT----

Query:  --------------APPLPPGDLRLCNNCYKQGHIAADCTN---------EKACNNCRKTGHLARDCPN---------DPICNLCNVSGHVARQCPKSNV
                      A     GD R C  C   GHI+ DC N         ++ C  C   GH++RDCPN         D  C  C  SGH++R+CP +  
Subjt:  --------------APPLPPGDLRLCNNCYKQGHIAADCTN---------EKACNNCRKTGHLARDCPN---------DPICNLCNVSGHVARQCPKSNV

Query:  LGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS
                          G+ G  D  C  C + GH+SR+C            G    C+ CG  GH++ +CPS
Subjt:  LGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS

Q3T0Q6 Cellular nucleic acid-binding protein6.9e-2236.53Show/hide
Query:  NLCKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIASEC-TTKSLCWNCREPGHMANSC-----PNEGICHTCGKAGHRARE
        N C  C R GH+ARECP                         IC+ CG  GH+A +C   +  C+NC   GH+A  C       E  C+ CGK GH AR+
Subjt:  NLCKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIASEC-TTKSLCWNCREPGHMANSC-----PNEGICHTCGKAGHRARE

Query:  CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC
        C        D + C +C + GHI  DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Subjt:  CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC

Arabidopsis top hitse value%identityAlignment
AT1G75560.1 zinc knuckle (CCHC-type) family protein1.0e-9262.74Show/hide
Query:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        S SRSR R RSRSP +R++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C NV++C+NCGLPGHIA+ECT +S CWNCREPGH+A++C N
Subjt:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    DRG R     G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT1G75560.2 zinc knuckle (CCHC-type) family protein1.0e-9262.74Show/hide
Query:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN
        S SRSR R RSRSP +R++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C NV++C+NCGLPGHIA+ECT +S CWNCREPGH+A++C N
Subjt:  SDSRSRSRSRSRSPLERKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    DRG R     G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT2G17870.1 cold shock domain protein 38.4e-1531.28Show/hide
Query:  CHNCGLPGHIASECTTKSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTA-----PPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLAR
        C NCG  GH+A +C   S        G        EG C+ CG  GH AR+C            G  R C +C + GH+A DC      N  R  G   R
Subjt:  CHNCGLPGHIASECTTKSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTA-----PPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLAR

Query:  DCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC
            D  C +C   GH AR C +             +GGG+V GG        C  C  +GH+++ C   +          C+ CGG GHLA +C
Subjt:  DCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC

AT3G43590.1 zinc knuckle (CCHC-type) family protein1.8e-1225.79Show/hide
Query:  CHNCGLPGHIASECTT----KSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CNNCR
        C++CG  GH +  C T    +  C+ C    H A  C     C+ C K GHRA++C           +C  C   GH    C  E +        C  C+
Subjt:  CHNCGLPGHIASECTT----KSLCWNCREPGHMANSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CNNCR

Query:  KTGHLARDCPNDPI-----CNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CHNC
          GHL    P + +     C  C   GH    C +     +  D        + R  +  YR      C + GH +R+C     I           C+ C
Subjt:  KTGHLARDCPNDPI-----CNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CHNC

Query:  GGRGHLAYECPSGRFMERYPR
         G GH A ECP+   + +  R
Subjt:  GGRGHLAYECPSGRFMERYPR

AT4G36020.1 cold shock domain protein 15.1e-2029.91Show/hide
Query:  NLCKNCKRPGHFARECPNVAICHNCGLPGHIASEC-------------TTKSLCWNCREPGHMANSCPNEGI-------------CHTCGKAGHRARECT
        +L K     G+ AR     + C+NCG  GHI+ +C                  C+NC + GH A  C + G              C+TCG  GH AR+CT
Subjt:  NLCKNCKRPGHFARECPNVAICHNCGLPGHIASEC-------------TTKSLCWNCREPGHMANSCPNEGI-------------CHTCGKAGHRARECT

Query:  APPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CNNCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDR
           +  GD R         C  C   GH A DCT + A             C +C   GH+ARDC         C  C  SGH+AR C +          
Subjt:  APPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CNNCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDR

Query:  GIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC
                 RG  GG  D  C  C + GH +R+C
Subjt:  GIGSGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGATAGCAGAAGTCGGAGCAGGAGCAGGAGCAGGAGCCCACTGGAACGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCCCAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGC
ATATTGCTTCAGAGTGCACTACAAAGTCACTATGTTGGAATTGTCGAGAACCTGGTCACATGGCAAATAGCTGTCCCAATGAAGGCATCTGCCACACCTGTGGTAAGGCG
GGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTGCCACCTGGGGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAATGAGAA
GGCATGCAACAATTGCAGGAAGACAGGCCATCTGGCTCGCGATTGTCCGAACGATCCCATTTGCAACCTGTGTAATGTATCAGGGCATGTAGCCAGACAGTGTCCAAAAT
CCAATGTCCTTGGAGACCGGGGAGACCGAGGCATTGGCAGTGGTGGTGGCAGCGTCCGTGGTGGTGCTGGTGGTTACCGGGATGTTGTGTGCAGGAACTGCCAGCAGCTT
GGCCATATGAGTAGGGATTGTATGGGCCCTTTGATGATCTGCCATAACTGTGGGGGACGTGGTCACCTGGCATACGAATGCCCTTCTGGTCGTTTTATGGAGCGTTATCC
CAGGAGGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGATAGCAGAAGTCGGAGCAGGAGCAGGAGCAGGAGCCCACTGGAACGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCCCAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGC
ATATTGCTTCAGAGTGCACTACAAAGTCACTATGTTGGAATTGTCGAGAACCTGGTCACATGGCAAATAGCTGTCCCAATGAAGGCATCTGCCACACCTGTGGTAAGGCG
GGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTGCCACCTGGGGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAATGAGAA
GGCATGCAACAATTGCAGGAAGACAGGCCATCTGGCTCGCGATTGTCCGAACGATCCCATTTGCAACCTGTGTAATGTATCAGGGCATGTAGCCAGACAGTGTCCAAAAT
CCAATGTCCTTGGAGACCGGGGAGACCGAGGCATTGGCAGTGGTGGTGGCAGCGTCCGTGGTGGTGCTGGTGGTTACCGGGATGTTGTGTGCAGGAACTGCCAGCAGCTT
GGCCATATGAGTAGGGATTGTATGGGCCCTTTGATGATCTGCCATAACTGTGGGGGACGTGGTCACCTGGCATACGAATGCCCTTCTGGTCGTTTTATGGAGCGTTATCC
CAGGAGGTACTGA
Protein sequenceShow/hide protein sequence
MSSDSRSRSRSRSRSPLERKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMANSCPNEGICHTCGKA
GHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGAGGYRDVVCRNCQQL
GHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY