; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001545 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001545
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCRM domain-containing protein
Genome locationchr4:32662878..32667722
RNA-Seq ExpressionLag0001545
SyntenyLag0001545
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588422.1 hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]2.6e-9979.35Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD
        MGASIMSS S     HSLLLRSVPSS ST   +PS      AVIS AC HQFKPN+SIFL RQSP+RSRSF+PSASVSF+RS SST+SD S VGF E+DD
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD

Query:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
         I+D+++SDYEDEVEIEDFELE+  V  GL+T VAS+S S+VV+ SEVKNIPSLTV+EKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR
        LKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIYRPSISKMKAEEEKRRARK+YVRKEPDRVK  LQ +++
Subjt:  LKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR

KAG7022267.1 yqeI [Cucurbita argyrosperma subsp. argyrosperma]6.9e-10079.71Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD
        MGASIMSS S     HSLLLRSVPSS ST   +PS      AVIS AC HQFKPN+SIFL RQSP+RSRSF+PSASVSF+RS SST+SD S VGF E+DD
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD

Query:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
         I+D+++SDYEDEVEIEDFELE+  V  GL+T VAS+S S+VV+ SEVKNIPSLTV+EKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR
        LKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIYRPSISKMKAEEEKRRARK+YVRKEPDRVK  LQ++I+
Subjt:  LKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR

XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]3.7e-10178.44Show/hide
Query:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDE
        MGASI+SSHSHSLLLRS+PSSFST FSKPS    AAA IST CFHQFKP++S  LTR+SP+  R F+PSA +SF+RS SST+SDPSEV FDE DDEIED+
Subjt:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDE

Query:  DDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL
        D+SDYEDEVE+ED      VG G +TGVASE  S +++R+EVKNIPSLT++EKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  DDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL

Query:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEI
        GNCP ELEDVVR+L ESTGSVVVNQIGRTVIIYRPSI+KMKAEEEKRRARK+Y+RKEPDRVKS+LQ +I
Subjt:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEI

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]2.6e-9973.88Show/hide
Query:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE
        M ASI+S    SHSHSLLLRSVPSSFST FSKPSATAA     ST CFHQFKP++S FLTR+SP+ SR F+PS S+SF+R  SSTVS PSEV FDE DDE
Subjt:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE

Query:  IEDEDDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
        IED+D+SDYEDEVE+ED     +VG G + GVASE  S V+NR+EVKNIPSLT++EKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
Subjt:  IEDEDDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK

Query:  IKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIRGGGDRPHPRRICNTHAN
        IK+LGNCP +LEDVVR+LEESTGSVVVNQIGRTVIIYRPSI+KMKAEEEKRR+RKIY+RKEPDRVKS+LQ ++         RR  + + N
Subjt:  IKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIRGGGDRPHPRRICNTHAN

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]5.8e-9978.89Show/hide
Query:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDE
        MGASI+S HSHSLLLRSVPSSFST FSKPSA AAAAAV    CF+QFKP +S F TR+S + SRSF PS S+SF RS +ST+S PSE  FDE+DDEIEDE
Subjt:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDE

Query:  DDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL
        D+SDYEDEVEI   E EEAV  G++TGVASE  S +VNR+EVKNIPSLT++EKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  DDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL

Query:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR
        GNCP ELED VR+LEESTGSVVVNQIGRTVIIYRPSI+KMKAE++KR+ARKIYVRKE DRVKS+LQ +I+
Subjt:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein1.8e-10178.44Show/hide
Query:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDE
        MGASI+SSHSHSLLLRS+PSSFST FSKPS    AAA IST CFHQFKP++S  LTR+SP+  R F+PSA +SF+RS SST+SDPSEV FDE DDEIED+
Subjt:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDE

Query:  DDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL
        D+SDYEDEVE+ED      VG G +TGVASE  S +++R+EVKNIPSLT++EKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  DDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL

Query:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEI
        GNCP ELEDVVR+L ESTGSVVVNQIGRTVIIYRPSI+KMKAEEEKRRARK+Y+RKEPDRVKS+LQ +I
Subjt:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEI

A0A1S3BJF7 uncharacterized protein LOC1034903501.3e-9973.88Show/hide
Query:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE
        M ASI+S    SHSHSLLLRSVPSSFST FSKPSATAA     ST CFHQFKP++S FLTR+SP+ SR F+PS S+SF+R  SSTVS PSEV FDE DDE
Subjt:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE

Query:  IEDEDDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
        IED+D+SDYEDEVE+ED     +VG G + GVASE  S V+NR+EVKNIPSLT++EKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
Subjt:  IEDEDDSDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK

Query:  IKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIRGGGDRPHPRRICNTHAN
        IK+LGNCP +LEDVVR+LEESTGSVVVNQIGRTVIIYRPSI+KMKAEEEKRR+RKIY+RKEPDRVKS+LQ ++         RR  + + N
Subjt:  IKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIRGGGDRPHPRRICNTHAN

A0A6J1C409 uncharacterized protein LOC1110077237.3e-6379.19Show/hide
Query:  DSDYEDEVEIEDFEL-EEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL
        DSDYE EV I DFEL EE++GG  Q    S+  SSVVN SEVKN+PSLTV+EKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+L
Subjt:  DSDYEDEVEIEDFEL-EEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL

Query:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIRGGG
         NCP EL+D VRQLEESTGSVVV+QIGRTVIIYRPSISKMKAEE+KR+ARKIYVRKEPDRVKS+LQ +++  G
Subjt:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIRGGG

A0A6J1EIK7 uncharacterized protein LOC1114347251.5e-6377.23Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD
        MGASIMSS S     HSLLLRSVPSS ST  SKPS      A IS AC HQFKPN+SIFL RQSP+RSRSFSPSASVSF+RS SST+SD S VGF E+DD
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD

Query:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
         I+D+D+SDY DEVEIEDFELE+  V  GL+T VAS+S  +VV+RSEVKNIPSLTV+EKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LK
        LK
Subjt:  LK

A0A6J1I2Z3 uncharacterized protein LOC1114700602.8e-9979.35Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD
        MGASIMSS S     HSLLLRSVPSS ST   +PS      AVIS AC HQFKPN+SIFL RQSP+RSRSF+PSASVSF+RS SS +S  S VGF E+DD
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDD

Query:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
         I+D+D+SDYEDEVEIEDFELE+  V  GL+T VAS+S S+VV+RSEVK+IPSLTV+EKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  EIEDEDDSDYEDEVEIEDFELEE-AVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR
        LKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVK  LQ +++
Subjt:  LKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIR

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY8.7e-0530Show/hide
Query:  SLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS
        +L+ ++K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY8.7e-0530Show/hide
Query:  SLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS
        +L+ ++K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY8.7e-0530Show/hide
Query:  SLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS
        +L+ ++K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI8.4e-0836.46Show/hide
Query:  LTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAE
        LT ++K+ L S AH L    +   VGK GV   +     E LEA EL+K+ VL NC  +  DV   L + + S +V  IG T+++Y+ S    + E
Subjt:  LTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAE

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.7e-2738.62Show/hide
Query:  ASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDEDD
        +S +++  H LL    P+S   LF +P     + +++     H    ++S+ L R  PY   SFSP        S+  +  D   V      +EI D+  
Subjt:  ASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDEDD

Query:  SDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGN
         D                         SE     +  +   +   L+ +EK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+K+   
Subjt:  SDYEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGN

Query:  CPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRR
        CPGELED++ +LEE+TGSV V QI RTVI+YRPS +K+KA+E+K+R
Subjt:  CPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRR

AT3G01370.1 CRM family member 23.4e-0431.58Show/hide
Query:  GLQTGVASESPSSVVNRSEVKN-IPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG-ELEDVVRQLEESTGS
        G  TG  S+  +    +SE    +  L+ RE+  L   A  + KK     VG+S V  GLA +     + N L  + V G   G  +++V+ +L+E TG+
Subjt:  GLQTGVASESPSSVVNRSEVKN-IPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG-ELEDVVRQLEESTGS

Query:  VVVNQIGRTVIIYR
        ++V+Q    VI+YR
Subjt:  VVVNQIGRTVIIYR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein3.5e-3342.53Show/hide
Query:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRS-----RSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE
        AS  S+H  H+LL    P S   LF +P   +A+ +  +    H+ KP    F ++  P  S     +SFS            S   D S   ++ ED+E
Subjt:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRS-----RSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE

Query:  IEDEDDSD-YEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
         EDE DS     E  IED E  E V    + G   E   +   +    +   L+++EKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  IEDEDDSD-YEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRK
        K+K+    P ELED V+ LEE+TGSV V QIGRTVI+YRPS +KMKAE +K+   ++ + +
Subjt:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRK

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein3.5e-3342.53Show/hide
Query:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRS-----RSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE
        AS  S+H  H+LL    P S   LF +P   +A+ +  +    H+ KP    F ++  P  S     +SFS            S   D S   ++ ED+E
Subjt:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRS-----RSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDE

Query:  IEDEDDSD-YEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
         EDE DS     E  IED E  E V    + G   E   +   +    +   L+++EKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  IEDEDDSD-YEDEVEIEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRK
        K+K+    P ELED V+ LEE+TGSV V QIGRTVI+YRPS +KMKAE +K+   ++ + +
Subjt:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCCTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGCCGCCGCCGC
CGTCATCTCTACCGCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTTCTCCCTCGGCATCCGTTTCCT
TCACTCGCTCCTTGTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGAAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAA
ATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGGTGGATTGCAAACTGGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAG
CTTGACGGTTAGGGAGAAGAAGGAGCTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTT
CTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCT
GTGGTGGTGAATCAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCTCGAAAAATTTATGTGAGAAAAGA
ACCTGATCGAGTGAAATCCGTTTTGCAGATGGAGATTCGAGGAGGCGGCGACCGACCACACCCACGTCGGATATGCAACACCCACGCGAATCCCTTGCTGGATCTACAAC
ACCCACGCGAATCCCTTGCTGGATCTGCAACACCTAGATCTGCAATGCTGGATCTCCTTTTTCTTCACGCAGTCGCTTGTCCTCACGTTCACGCCGTCGCCGTTCGTCCT
CGCGTTCACGTCATTGTCGTCGGATATGCATCGTTAGGATTTGGTTCACGCAGTTGCTTGTCCTTGCGTTCACGTTGTTGTCGTCCTCACGTTCGTTCACATCGTTCGTG
GATTCGAAGGGAAAATCAATCTGAAACCCCTTCATTTCGGACCCAAACGTTAGATCTACTGCTCGTGGAGGTTGGTTGGCCGGAAAATACAGAGGCACGAGAGGAATCCT
TAGATTTGGAATGCTGCTGCCCCTTCTCCTCACGAACTTTTTCCCTCCTTGGATCTGGAACGCTGCGTGGGTTTCTCTCTCCCCGTCGTCGTCCGTCATCTTGGAGTTTC
CCCATCGCCGGCAAGAAGAAAAAAAGATTTAAAAAAAACAAGAAAAGGAAAAGAAAGAAAGGAGGTGGAAGGAAAAAAAATGCCAGTCATCGACGACTGCGACGATGGTC
GTCGACGGATGACGGCGGTGGTCGGTACTGCCGCCGACAATTACAAATGGTGGCTGTGTGGTGGGGTGTGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCCTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGCCGCCGCCGC
CGTCATCTCTACCGCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTTCTCCCTCGGCATCCGTTTCCT
TCACTCGCTCCTTGTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGAAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAA
ATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGGTGGATTGCAAACTGGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAG
CTTGACGGTTAGGGAGAAGAAGGAGCTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTT
CTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCT
GTGGTGGTGAATCAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCTCGAAAAATTTATGTGAGAAAAGA
ACCTGATCGAGTGAAATCCGTTTTGCAGATGGAGATTCGAGGAGGCGGCGACCGACCACACCCACGTCGGATATGCAACACCCACGCGAATCCCTTGCTGGATCTACAAC
ACCCACGCGAATCCCTTGCTGGATCTGCAACACCTAGATCTGCAATGCTGGATCTCCTTTTTCTTCACGCAGTCGCTTGTCCTCACGTTCACGCCGTCGCCGTTCGTCCT
CGCGTTCACGTCATTGTCGTCGGATATGCATCGTTAGGATTTGGTTCACGCAGTTGCTTGTCCTTGCGTTCACGTTGTTGTCGTCCTCACGTTCGTTCACATCGTTCGTG
GATTCGAAGGGAAAATCAATCTGAAACCCCTTCATTTCGGACCCAAACGTTAGATCTACTGCTCGTGGAGGTTGGTTGGCCGGAAAATACAGAGGCACGAGAGGAATCCT
TAGATTTGGAATGCTGCTGCCCCTTCTCCTCACGAACTTTTTCCCTCCTTGGATCTGGAACGCTGCGTGGGTTTCTCTCTCCCCGTCGTCGTCCGTCATCTTGGAGTTTC
CCCATCGCCGGCAAGAAGAAAAAAAGATTTAAAAAAAACAAGAAAAGGAAAAGAAAGAAAGGAGGTGGAAGGAAAAAAAATGCCAGTCATCGACGACTGCGACGATGGTC
GTCGACGGATGACGGCGGTGGTCGGTACTGCCGCCGACAATTACAAATGGTGGCTGTGTGGTGGGGTGTGTGGTAG
Protein sequenceShow/hide protein sequence
MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAAAAAVISTACFHQFKPNTSIFLTRQSPYRSRSFSPSASVSFTRSLSSTVSDPSEVGFDEEDDEIEDEDDSDYEDEVE
IEDFELEEAVGGGLQTGVASESPSSVVNRSEVKNIPSLTVREKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGS
VVVNQIGRTVIIYRPSISKMKAEEEKRRARKIYVRKEPDRVKSVLQMEIRGGGDRPHPRRICNTHANPLLDLQHPRESLAGSATPRSAMLDLLFLHAVACPHVHAVAVRP
RVHVIVVGYASLGFGSRSCLSLRSRCCRPHVRSHRSWIRRENQSETPSFRTQTLDLLLVEVGWPENTEAREESLDLECCCPFSSRTFSLLGSGTLRGFLSPRRRPSSWSF
PIAGKKKKRFKKNKKRKRKKGGGRKKNASHRRLRRWSSTDDGGGRYCRRQLQMVAVWWGVW