; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001552 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001552
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear polyadenylated RNA-binding protein 3-like
Genome locationchr4:32755102..32755677
RNA-Seq ExpressionLag0001552
SyntenyLag0001552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572059.1 hypothetical protein SDJN03_28787, partial [Cucurbita argyrosperma subsp. sororia]1.4e-7278.79Show/hide
Query:  MEALSGA----SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISL-VEDRIDDRF
        MEA+SGA    SSSSSSS+EF FYDDFEYEFVEDVERLSNWE L+ASDADS+MDGN G E+EGK+C V  R+PEDLRE ISP+VVVPISL  EDRI D  
Subjt:  MEALSGA----SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISL-VEDRIDDRF

Query:  DDVYLLQNQEEDGYRYGYDGAEEEE--NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        +DVY LQN  EDG+ YGY+ AEE+E   DDDDD D DE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DDVYLLQNQEEDGYRYGYDGAEEEE--NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

KAG7011726.1 hypothetical protein SDJN02_26632, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-7278.79Show/hide
Query:  MEALSGA----SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISL-VEDRIDDRF
        MEA+SGA    SSSSSSS+EF FYDDFEYEFVEDVERLSNWE L+ASDADS+MDGN G E+EGK+C V  R+PEDLRE ISP+VVVPISL  EDRI D  
Subjt:  MEALSGA----SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISL-VEDRIDDRF

Query:  DDVYLLQNQEEDGYRYGYDGAEEEE--NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        +DVY LQN  EDG+ YGY+ AEE E   DDDDD D DE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DDVYLLQNQEEDGYRYGYDGAEEEE--NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_011658549.2 uncharacterized protein LOC101212092 [Cucumis sativus]2.7e-7378.53Show/hide
Query:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL
        MEA+SG+SSSSSSS+EFVFYDDFEYEFVED+ERLSNWELLDA DADS+M GN G EE+G +C VD  V +DLRE ISP++ VPISLVEDRID   +D Y 
Subjt:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL

Query:  LQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        L NQ EDG+ YGY+ AEEE+  DDD+   DEFDLDDELVPWSVS KLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  LQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_022969470.1 uncharacterized protein LOC111468462 [Cucurbita maxima]1.8e-7278.17Show/hide
Query:  MEALSGA---SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDD
        MEA+SGA   SSSSSSS+EF FYDDFEYEFVEDVERLSNWE L+ASDADS+MDGN G E+EGK+C V  R+PEDL E ISP+VVVPISL EDRI D  +D
Subjt:  MEALSGA---SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDD

Query:  VYLLQNQEEDGYRYGYDGAEEEE---NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        VY LQN  EDG+ YGY+ AEE+E   +D DDD D DE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  VYLLQNQEEDGYRYGYDGAEEEE---NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_023553634.1 histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo]3.8e-7579.19Show/hide
Query:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL
        MEA+SGASSSSSSS+EF FYDDFEYEFVEDVERLSNWE L+ASDADS+MDGN G E+EGK+C V  R+PEDLRE ISP+VVVPISL EDRI D  +DVY 
Subjt:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL

Query:  LQNQEEDGYRYGYDGAEEEE------NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        LQN  EDG+ YGY+ AEE+E      +DDDDD D DE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  LQNQEEDGYRYGYDGAEEEE------NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

TrEMBL top hitse value%identityAlignment
A0A0A0K4F3 Uncharacterized protein1.3e-7378.53Show/hide
Query:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL
        MEA+SG+SSSSSSS+EFVFYDDFEYEFVED+ERLSNWELLDA DADS+M GN G EE+G +C VD  V +DLRE ISP++ VPISLVEDRID   +D Y 
Subjt:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL

Query:  LQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        L NQ EDG+ YGY+ AEEE+  DDD+   DEFDLDDELVPWSVS KLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  LQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A1S3BJG2 uncharacterized protein LOC1034903563.1e-7075.63Show/hide
Query:  MEALSG------ASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDR
        MEA+SG      +SSSSSSS+EFVFYDDFEYEFVED+ERLSNWELLDA DADS+M GN G EE+G++  VD  V +DLRE ISP++ VPISLVEDRID  
Subjt:  MEALSG------ASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDR

Query:  FDDVYLLQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
         +D   L NQ EDG+ YGYD AEEE  D+ DD + DEFDLDDELVPWSVS KLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  FDDVYLLQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A5A7SRG7 Nuclear polyadenylated RNA-binding protein 3-like1.8e-7077.49Show/hide
Query:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL
        MEA+SG  SSSSSS+EFVFYDDFEYEFVED+ERLSNWELLDA DADS+M GN G EE+G++  VD  V +DLRE ISP++ VPISLVEDRID   +D   
Subjt:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYL

Query:  LQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        L NQ EDG+ YGYD AEEE+  DDD+   DEFDLDDELVPWSVS KLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  LQNQEEDGYRYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A6J1F1D0 NAD-dependent protein deacetylase HST1-like1.4e-6774.13Show/hide
Query:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGN-------RGEEEEGKDCGVDGRVPEDLRERISPLVVVPI-SLVEDRID
        MEA SGA+SSSSSS+EFVF+DD EYEFVE+VERLSNWELLDASDAD ++DGN         EEEEG+ C VD RVP+DLR +   +V +PI SLVE+RID
Subjt:  MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGN-------RGEEEEGKDCGVDGRVPEDLRERISPLVVVPI-SLVEDRID

Query:  DRFDDVYLLQNQEEDGYRYGYDGAEEEENDD---DDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKH
          FDDVYLLQNQ E+G+ YG +  EE+E+DD   DDD DGDE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKH
Subjt:  DRFDDVYLLQNQEEDGYRYGYDGAEEEENDD---DDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKH

Query:  S
        S
Subjt:  S

A0A6J1I004 uncharacterized protein LOC1114684628.6e-7378.17Show/hide
Query:  MEALSGA---SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDD
        MEA+SGA   SSSSSSS+EF FYDDFEYEFVEDVERLSNWE L+ASDADS+MDGN G E+EGK+C V  R+PEDL E ISP+VVVPISL EDRI D  +D
Subjt:  MEALSGA---SSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDD

Query:  VYLLQNQEEDGYRYGYDGAEEEE---NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        VY LQN  EDG+ YGY+ AEE+E   +D DDD D DE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  VYLLQNQEEDGYRYGYDGAEEEE---NDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34630.1 unknown protein3.6e-1537.16Show/hide
Query:  LSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVP------------ISLVEDRIDDRFDDVYLLQNQEED--------------
        L  WE+++ SD +   D    +     D      +  D    ++P V+ P            +++  D  DD  DDV   +  E D              
Subjt:  LSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVP------------ISLVEDRIDDRFDDVYLLQNQEED--------------

Query:  -GYRYGYDGAEEEENDDDDDRD-GDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK
         GY  G    +   +D ++DR+  D +DLD+ELVP SVS K+GRQRMRKLGKR   K+Y SK SPFL  KPG VRGKHGLG+K
Subjt:  -GYRYGYDGAEEEENDDDDDRD-GDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK

AT5G48420.1 unknown protein1.3e-0443.21Show/hide
Query:  RYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFT--KPGCVRGKHGLGLK
        R GYD  EE++ D  DD D D      ELV          QR+RK GKR F K    K+  + ++  KPGCV GKHGL +K
Subjt:  RYGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFT--KPGCVRGKHGLGLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCCTTTCCGGAGCATCATCTTCGTCTTCATCGTCTCTTGAATTCGTGTTCTACGATGATTTCGAATACGAATTCGTCGAAGATGTCGAACGCCTTTCGAACTG
GGAACTGCTCGATGCTTCTGATGCCGATTCCGATATGGACGGAAATCGAGGTGAAGAAGAAGAAGGGAAAGACTGCGGCGTCGATGGTAGAGTTCCTGAAGATCTTCGAG
AGAGGATTTCTCCTCTTGTAGTGGTGCCGATTTCTCTTGTGGAGGATCGAATCGACGATCGTTTCGATGATGTTTACTTGCTTCAGAATCAGGAGGAAGACGGTTATCGC
TACGGTTACGATGGTGCGGAGGAGGAAGAGAACGACGACGACGACGATCGTGATGGAGATGAGTTCGATTTGGACGACGAACTCGTTCCGTGGTCGGTCAGTGGCAAACT
CGGACGGCAGAGGATGAGGAAATTAGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCGCCGTTTTTGTTCACCAAGCCTGGATGCGTCCGCGGAAAGCACG
GACTCGGCTTGAAGCACAGTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCCTTTCCGGAGCATCATCTTCGTCTTCATCGTCTCTTGAATTCGTGTTCTACGATGATTTCGAATACGAATTCGTCGAAGATGTCGAACGCCTTTCGAACTG
GGAACTGCTCGATGCTTCTGATGCCGATTCCGATATGGACGGAAATCGAGGTGAAGAAGAAGAAGGGAAAGACTGCGGCGTCGATGGTAGAGTTCCTGAAGATCTTCGAG
AGAGGATTTCTCCTCTTGTAGTGGTGCCGATTTCTCTTGTGGAGGATCGAATCGACGATCGTTTCGATGATGTTTACTTGCTTCAGAATCAGGAGGAAGACGGTTATCGC
TACGGTTACGATGGTGCGGAGGAGGAAGAGAACGACGACGACGACGATCGTGATGGAGATGAGTTCGATTTGGACGACGAACTCGTTCCGTGGTCGGTCAGTGGCAAACT
CGGACGGCAGAGGATGAGGAAATTAGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCGCCGTTTTTGTTCACCAAGCCTGGATGCGTCCGCGGAAAGCACG
GACTCGGCTTGAAGCACAGTTACTAG
Protein sequenceShow/hide protein sequence
MEALSGASSSSSSSLEFVFYDDFEYEFVEDVERLSNWELLDASDADSDMDGNRGEEEEGKDCGVDGRVPEDLRERISPLVVVPISLVEDRIDDRFDDVYLLQNQEEDGYR
YGYDGAEEEENDDDDDRDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY