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Lag0001574 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001574
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr4:33015487..33016893
RNA-Seq ExpressionLag0001574
SyntenyLag0001574
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0645.16Show/hide
Query:  SWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKAYEML
        S K+N    W E+ G GG+ W IHDS GS     CK++ ++W +K LE +A+IEGLK Y ++
Subjt:  SWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKAYEML

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]8.6e-0839.19Show/hide
Query:  QLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        ++E+++   WKPP   SWK+N +  W      GG+GW + D  G +  A C+ I    NI  LE  AI EGL+A
Subjt:  QLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]4.3e-0737.66Show/hide
Query:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        P  ++ +++   WKPP   SWK+N D  W       G+GW + D  G +   GC+ I    NI  LE  AI EGL+A
Subjt:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]4.3e-0737.66Show/hide
Query:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        P  ++ +++   WKPP   SWK+N D  W       G+GW + D  G +   GC+ I    NI  LE  AI EGL+A
Subjt:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]3.3e-0744.62Show/hide
Query:  WKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        WKPP   SWK+N D  W      GG+GW + D  G +  A C+ I    NI  LE  AI EGL+A
Subjt:  WKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

TrEMBL top hitse value%identityAlignment
A0A5D3E1D7 Transforming growth factor-beta receptor-associated protein 1 isoform X14.3e-0544.83Show/hide
Query:  SPTPQLENHSSH-LWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKK
        SP  + E+ SSH  W  P  G WK+N D  W++   CGG+GW + DS GS    GC+K
Subjt:  SPTPQLENHSSH-LWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKK

A0A6J1CP26 uncharacterized protein LOC1110134124.2e-0839.19Show/hide
Query:  QLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        ++E+++   WKPP   SWK+N +  W      GG+GW + D  G +  A C+ I    NI  LE  AI EGL+A
Subjt:  QLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X12.1e-0737.66Show/hide
Query:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        P  ++ +++   WKPP   SWK+N D  W       G+GW + D  G +   GC+ I    NI  LE  AI EGL+A
Subjt:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.1e-0737.66Show/hide
Query:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        P  ++ +++   WKPP   SWK+N D  W       G+GW + D  G +   GC+ I    NI  LE  AI EGL+A
Subjt:  PTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

A0A6J1DSV1 uncharacterized protein LOC1110236081.6e-0744.62Show/hide
Query:  WKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA
        WKPP   SWK+N D  W      GG+GW + D  G +  A C+ I    NI  LE  AI EGL+A
Subjt:  WKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEAEAIIEGLKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACGGCAGCCGGTGACAACAGTGACCTTGGTGGTGGTGATGGTCATGATGGTCTCAATGGGAATCTACAACGCATACGTTCTGGTCGTAACATACCAGCATTTTC
AAGGGCTCGCCCGTCCCCTACCCCTCAATTGGAGAACCACTCGAGTCACTTGTGGAAACCACCGGATCCTGGTAGCTGGAAGATGAATGTTGATGTTTTGTGGATTGAGA
AAGATGGTTGCGGCGGTTTAGGCTGGTCAATTCATGACTCCAATGGATCTTTGACCGGAGCGGGCTGCAAAAAAATCACGAAACGCTGGAATATCAAGTGTCTGGAAGCA
GAGGCCATAATTGAGGGATTGAAAGCTTATGAGATGTTGGATTTAGACGAAAGGAGAAGATGCAAGCTACCTCTGGTGGTACAAGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACGGCAGCCGGTGACAACAGTGACCTTGGTGGTGGTGATGGTCATGATGGTCTCAATGGGAATCTACAACGCATACGTTCTGGTCGTAACATACCAGCATTTTC
AAGGGCTCGCCCGTCCCCTACCCCTCAATTGGAGAACCACTCGAGTCACTTGTGGAAACCACCGGATCCTGGTAGCTGGAAGATGAATGTTGATGTTTTGTGGATTGAGA
AAGATGGTTGCGGCGGTTTAGGCTGGTCAATTCATGACTCCAATGGATCTTTGACCGGAGCGGGCTGCAAAAAAATCACGAAACGCTGGAATATCAAGTGTCTGGAAGCA
GAGGCCATAATTGAGGGATTGAAAGCTTATGAGATGTTGGATTTAGACGAAAGGAGAAGATGCAAGCTACCTCTGGTGGTACAAGGAAAATGA
Protein sequenceShow/hide protein sequence
MSTAAGDNSDLGGGDGHDGLNGNLQRIRSGRNIPAFSRARPSPTPQLENHSSHLWKPPDPGSWKMNVDVLWIEKDGCGGLGWSIHDSNGSLTGAGCKKITKRWNIKCLEA
EAIIEGLKAYEMLDLDERRRCKLPLVVQGK