; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001579 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001579
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvesicle-associated protein 4-1-like
Genome locationchr4:33097526..33098327
RNA-Seq ExpressionLag0001579
SyntenyLag0001579
Gene Ontology termsGO:0007029 - endoplasmic reticulum organization (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607844.1 Ubiquitin carboxyl-terminal hydrolase 14, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1266.67Show/hide
Query:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        + + D  +   LC +WQ  NTSSSSSST NLHHS H PS RN   SNN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

KAG7015241.1 Vesicle-associated protein 4-1 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1266.67Show/hide
Query:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        + + D  +   LC +WQ  NTSSSSSST NLHHS H PS RN   SNN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

XP_022940024.1 vesicle-associated protein 4-1-like [Cucurbita moschata]1.0e-1266.67Show/hide
Query:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        + + D  +   LC +WQ  NTSSSSSST NLHHS H PS RN   SNN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

XP_023523354.1 vesicle-associated protein 4-1-like [Cucurbita pepo subsp. pepo]1.0e-1266.67Show/hide
Query:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        + + D  +   LC +WQ  NTSSSSSST NLHHS H PS RN   SNN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

XP_038900245.1 vesicle-associated protein 4-1 [Benincasa hispida]1.2e-1380.65Show/hide
Query:  LCPIWQLRNT-SSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        LCPIWQ  NT SSSSSST NLHHSSH PS RNS  SNN+K  +SSKTVSSVAKSLLPPRRRL
Subjt:  LCPIWQLRNT-SSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

TrEMBL top hitse value%identityAlignment
A0A1S3BZ62 vesicle-associated protein 4-11.2e-1175.81Show/hide
Query:  LCPIWQLRNT-SSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        LCPIWQ  NT SSSSSSTHNLHH++H PS R     NN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LCPIWQLRNT-SSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

A0A5A7T1W8 Vesicle-associated protein 4-11.2e-1175.81Show/hide
Query:  LCPIWQLRNT-SSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        LCPIWQ  NT SSSSSSTHNLHH++H PS R     NN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LCPIWQLRNT-SSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

A0A6J1FIV4 vesicle-associated protein 4-1-like5.0e-1366.67Show/hide
Query:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        + + D  +   LC +WQ  NTSSSSSST NLHHS H PS RN   SNN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

A0A6J1INV3 vesicle-associated protein 4-1-like1.6e-1172.13Show/hide
Query:  LCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        LC IWQ  NTSSSS ST N+HHS + P  RNS  SNN+K  SSSKTVS VAKSLLPPRRRL
Subjt:  LCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

A0A6J1IZX3 vesicle-associated protein 4-1-like2.5e-1265.28Show/hide
Query:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL
        + + D  +   LC +WQ  NTSSSSSST NLH S H PS RN   SNN+K  SSSKTVSSVAKSLLPPRRRL
Subjt:  LEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTTGCTAAAGAACCTGATGAATTTGTGAAGTTGTTGCAGGTCCTCTTGGACATCACAAATCCTGAACTGGAAATTTTGGATACATTTGAAGATGTTGAGTTGTG
TCCGATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCGACTCATAACCTTCACCATAGTAGTCATGACCCTAGCAAAAGAAACTCAATGACGTCGAATAATATCA
AATTGCCATCGTCTTCCAAGACAGTGTCCTCTGTGGCGAAGTCGTTGTTGCCTCCTCGGCGTCGGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACTTGCTAAAGAACCTGATGAATTTGTGAAGTTGTTGCAGGTCCTCTTGGACATCACAAATCCTGAACTGGAAATTTTGGATACATTTGAAGATGTTGAGTTGTG
TCCGATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCGACTCATAACCTTCACCATAGTAGTCATGACCCTAGCAAAAGAAACTCAATGACGTCGAATAATATCA
AATTGCCATCGTCTTCCAAGACAGTGTCCTCTGTGGCGAAGTCGTTGTTGCCTCCTCGGCGTCGGCTCTGA
Protein sequenceShow/hide protein sequence
MRLAKEPDEFVKLLQVLLDITNPELEILDTFEDVELCPIWQLRNTSSSSSSTHNLHHSSHDPSKRNSMTSNNIKLPSSSKTVSSVAKSLLPPRRRL