; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001590 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001590
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvesicle-associated protein 4-1-like
Genome locationchr4:33225328..33226486
RNA-Seq ExpressionLag0001590
SyntenyLag0001590
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607844.1 Ubiquitin carboxyl-terminal hydrolase 14, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1070Show/hide
Query:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        C + Q  NTSSSSSST NLHHS H PS+RN T+SNN+K  SSSKTV S+AKSLLPP+ RL
Subjt:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

KAG7015241.1 Vesicle-associated protein 4-1 [Cucurbita argyrosperma subsp. argyrosperma]7.6e-1070Show/hide
Query:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        C + Q  NTSSSSSST NLHHS H PS+RN T+SNN+K  SSSKTV S+AKSLLPP+ RL
Subjt:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

XP_022940024.1 vesicle-associated protein 4-1-like [Cucurbita moschata]7.6e-1070Show/hide
Query:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        C + Q  NTSSSSSST NLHHS H PS+RN T+SNN+K  SSSKTV S+AKSLLPP+ RL
Subjt:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

XP_023523354.1 vesicle-associated protein 4-1-like [Cucurbita pepo subsp. pepo]7.6e-1070Show/hide
Query:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        C + Q  NTSSSSSST NLHHS H PS+RN T+SNN+K  SSSKTV S+AKSLLPP+ RL
Subjt:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

XP_038900245.1 vesicle-associated protein 4-1 [Benincasa hispida]1.2e-1061.84Show/hide
Query:  ATHHSNFCPINFRWFCPIGQLRNT-SSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        A  H     I     CPI Q  NT SSSSSST NLHHS H PS+RNST SNN+K  +SSKTV S+AKSLLPP+ RL
Subjt:  ATHHSNFCPINFRWFCPIGQLRNT-SSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

TrEMBL top hitse value%identityAlignment
A0A5N6LBY0 Uncharacterized protein7.0e-0987.5Show/hide
Query:  MIHDNSTDRTAIVPATHHSNFCPINFRWFCPI
        MIHDNSTDRTA+VPATHHSNFCPINFRW  P+
Subjt:  MIHDNSTDRTAIVPATHHSNFCPINFRWFCPI

A0A6J1F9Z2 vesicle-associated protein 4-1-like1.8e-0954.67Show/hide
Query:  ATHHSNFCPINFRWFCPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        A  H     + F   C I Q  NTSSSS ST N+HH+ + P +RNST+SNN+K  SSS TV S+AKSLLPP+ RL
Subjt:  ATHHSNFCPINFRWFCPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

A0A6J1FIV4 vesicle-associated protein 4-1-like3.7e-1070Show/hide
Query:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        C + Q  NTSSSSSST NLHHS H PS+RN T+SNN+K  SSSKTV S+AKSLLPP+ RL
Subjt:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

A0A6J1INV3 vesicle-associated protein 4-1-like8.2e-1056Show/hide
Query:  ATHHSNFCPINFRWFCPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        A  H     + F   C I Q  NTSSSS ST N+HHS + P +RNST+SNN+K  SSSKTV  +AKSLLPP+ RL
Subjt:  ATHHSNFCPINFRWFCPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

A0A6J1IZX3 vesicle-associated protein 4-1-like1.2e-0866.67Show/hide
Query:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL
        C + Q  NTSSSSSST NLH S H PS+RN  +SNN+K  SSSKTV S+AKSLLPP+ RL
Subjt:  CPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTTTTGTCCGATTGGGCAATTGAGGAA
TACTTCGTCTTCTTCGTCGTCAACTCATAACCTTCACCATAGTGATCATGACCCTAGTGAAAGAAACTCAACGTCGTCGAATAATATCAAATTGCCATCGTCTTCCAAGA
CAGTGTTCTCTATGGCAAAGTCGTTGTTGCCTCCTCAGTGTCGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTTTTGTCCGATTGGGCAATTGAGGAA
TACTTCGTCTTCTTCGTCGTCAACTCATAACCTTCACCATAGTGATCATGACCCTAGTGAAAGAAACTCAACGTCGTCGAATAATATCAAATTGCCATCGTCTTCCAAGA
CAGTGTTCTCTATGGCAAAGTCGTTGTTGCCTCCTCAGTGTCGGCTTTGA
Protein sequenceShow/hide protein sequence
MIHDNSTDRTAIVPATHHSNFCPINFRWFCPIGQLRNTSSSSSSTHNLHHSDHDPSERNSTSSNNIKLPSSSKTVFSMAKSLLPPQCRL