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Lag0001597 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001597
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:33311025..33311500
RNA-Seq ExpressionLag0001597
SyntenyLag0001597
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047865.6e-0440.51Show/hide
Query:  MNADADAACGSSTQSTGVGLICRINGGEVVVASSLFLDFSMEAHMVEIQAIYEGLKRAILLGCTKIIVESDSNMTIKFI
        M  ++DAAC S+  STG+GLI R + G ++VA S+FL   +     EI+ I E LK A     T+++VESD    I+ +
Subjt:  MNADADAACGSSTQSTGVGLICRINGGEVVVASSLFLDFSMEAHMVEIQAIYEGLKRAILLGCTKIIVESDSNMTIKFI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAGATGCAGACGCCGCCTGTGGATCATCTACACAGTCGACAGGTGTGGGATTGATTTGCAGAATCAATGGTGGGGAAGTCGTGGTTGCTTCATCTTTGTTTTT
GGATTTCTCTATGGAGGCCCATATGGTGGAAATCCAGGCCATCTATGAAGGTCTAAAACGTGCCATTCTTTTGGGTTGTACAAAAATCATTGTTGAATCAGATAGCAATA
TGACCATCAAGTTCATAAACAAGGAGGCAACTGCCGAGTTTGACCGTTCACGTTTTCCCCAAGTGGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAGATGCAGACGCCGCCTGTGGATCATCTACACAGTCGACAGGTGTGGGATTGATTTGCAGAATCAATGGTGGGGAAGTCGTGGTTGCTTCATCTTTGTTTTT
GGATTTCTCTATGGAGGCCCATATGGTGGAAATCCAGGCCATCTATGAAGGTCTAAAACGTGCCATTCTTTTGGGTTGTACAAAAATCATTGTTGAATCAGATAGCAATA
TGACCATCAAGTTCATAAACAAGGAGGCAACTGCCGAGTTTGACCGTTCACGTTTTCCCCAAGTGGCGTAA
Protein sequenceShow/hide protein sequence
MNADADAACGSSTQSTGVGLICRINGGEVVVASSLFLDFSMEAHMVEIQAIYEGLKRAILLGCTKIIVESDSNMTIKFINKEATAEFDRSRFPQVA