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Lag0001610 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001610
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial
Genome locationchr4:33526475..33527060
RNA-Seq ExpressionLag0001610
SyntenyLag0001610
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588438.1 hypothetical protein SDJN03_17003, partial [Cucurbita argyrosperma subsp. sororia]3.3e-3089.41Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE
        MASVCRS+LTA GSR MAGRTRTL +KTLNP+P SSSS+GL SVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE

KAG7022286.1 hypothetical protein SDJN02_16017, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-3189.53Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MASVCRS+LTA GSR MAGRTRTL +KTLNP+P SSSS+GL SVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

XP_022136047.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica charantia]1.4e-3191.95Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MA+VCRSLLTAAGSRS+AGRTRTL  KTLNP+PV SSSSRG+PSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

XP_023531748.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]2.3e-3190.7Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MASVCRS+LTA GSRSMAGRTRTL +KTLNP+P SSSS+GL SVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

XP_038887804.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida]6.7e-3191.86Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MASVCRSLLTAA SRSMAGRTRTLA KTLNP+ VSSSSRG  SVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCW WLSEG
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

TrEMBL top hitse value%identityAlignment
A0A5D3BYV0 Protein NUCLEAR FUSION DEFECTIVE 62.2e-2785.06Show/hide
Query:  MASVCRSLLT-AAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MASV RSLLT AA SRSMAGRTR LA KTLNP+ VSSSSR  PS++RIVSSLA VESLMPLH+AVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLT-AAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

A0A6J1C4G8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial6.6e-3291.95Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MA+VCRSLLTAAGSRS+AGRTRTL  KTLNP+PV SSSSRG+PSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

A0A6J1F5F6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like3.6e-3087.21Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MASVCRS+LTA G+R + GRTRTL +KTLNP+P SSSSRGL SVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

A0A6J1GKU0 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like1.2e-2885.39Show/hide
Query:  MASVCRSLLTAA---GSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MAS+CRSLL AA   GSRSMAGRTRTLA  TL PVPVSSSSRG  SVSRI SSLA+V+SLMPLHSAVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLTAA---GSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

A0A6J1I675 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial2.6e-2886.36Show/hide
Query:  MASVCRSLLTAA--GSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        MASVCRSLL AA  GSRSMAGRTRTLA  TL PVPVSSSSRG  SVSRI  SLA+V+SLMPLHSAVASARLKSKIAVDSHCWSWLSEG
Subjt:  MASVCRSLLTAA--GSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial5.6e-0437.93Show/hide
Query:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE
        S  RS+L AA SRS A  T   A +  +  P+  +++R  P +S +   V     VESL+P HSA ASA + SK+++    + WLS+
Subjt:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE

Arabidopsis top hitse value%identityAlignment
AT2G20585.1 nuclear fusion defective 64.0e-0537.93Show/hide
Query:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE
        S  RS+L AA SRS A  T   A +  +  P+  +++R  P +S +   V     VESL+P HSA ASA + SK+++    + WLS+
Subjt:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE

AT2G20585.2 nuclear fusion defective 61.0e-0537.36Show/hide
Query:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEGIPE
        S  RS+L AA SRS A  T   A +  +  P+  +++R  P +S +   V     VESL+P HSA ASA + SK+++    + WLS+   E
Subjt:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEGIPE

AT2G20585.3 nuclear fusion defective 68.0e-0638.64Show/hide
Query:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG
        S  RS+L AA SRS A  T   A +  +  P+  +++R  P +S +   V     VESL+P HSA ASA + SK+++    + WLS+G
Subjt:  SVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPV-SSSSRGLPSVSRI---VSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEG

AT4G39300.1 unknown protein3.1e-1853.76Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSS------SRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEGI
        MAS CRS L  AGSR++  R+RT+ QK+LN  P ++S      S+ +P  SR++S+L +VE+++PLHSAVASARL+S IA DS CWS LS+G+
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSS------SRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEGI

AT4G39300.2 unknown protein9.1e-1853.12Show/hide
Query:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSS------SRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE--GIP
        MAS CRS L  AGSR++  R+RT+ QK+LN  P ++S      S+ +P  SR++S+L +VE+++PLHSAVASARL+S IA DS CWS LS+  G+P
Subjt:  MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSS------SRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSE--GIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCGTTTGCCGATCACTTCTCACGGCGGCGGGTTCGAGGTCCATGGCCGGCCGAACCAGAACACTCGCTCAAAAAACCCTAAATCCAGTGCCTGTTTCTTCTTC
CTCCAGAGGCCTCCCTTCCGTTTCCAGGATTGTTTCGTCTCTGGCTACTGTGGAGTCGCTGATGCCACTCCACAGCGCCGTCGCTTCAGCTCGATTGAAGTCCAAAATCG
CCGTCGACTCACATTGCTGGAGCTGGCTTTCTGAAGGAATTCCTGAATATTGCTGCTATTTCCTGATTTTATCTCTTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCGTTTGCCGATCACTTCTCACGGCGGCGGGTTCGAGGTCCATGGCCGGCCGAACCAGAACACTCGCTCAAAAAACCCTAAATCCAGTGCCTGTTTCTTCTTC
CTCCAGAGGCCTCCCTTCCGTTTCCAGGATTGTTTCGTCTCTGGCTACTGTGGAGTCGCTGATGCCACTCCACAGCGCCGTCGCTTCAGCTCGATTGAAGTCCAAAATCG
CCGTCGACTCACATTGCTGGAGCTGGCTTTCTGAAGGAATTCCTGAATATTGCTGCTATTTCCTGATTTTATCTCTTGACTAA
Protein sequenceShow/hide protein sequence
MASVCRSLLTAAGSRSMAGRTRTLAQKTLNPVPVSSSSRGLPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEGIPEYCCYFLILSLD