; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001611 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001611
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr4:33529672..33534042
RNA-Seq ExpressionLag0001611
SyntenyLag0001611
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011654398.1 uncharacterized protein LOC105435382 [Cucumis sativus]5.6e-1453.01Show/hide
Query:  QLFFDPNLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        QL    NLG+ SCRVWD  EI C+HAL V    NLN+YS+VSDYY S+T  STY   V P G HS    ++ D+ ALP + KR
Subjt:  QLFFDPNLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

XP_016903680.1 PREDICTED: uncharacterized protein LOC107992343, partial [Cucumis melo]1.6e-1351.95Show/hide
Query:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        N  + SC  WDL+EISCAHAL V R  NLN Y+FVS YY++   S+TY   V P GNH++ S ++V+ N LP V +R
Subjt:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

XP_038887651.1 uncharacterized protein LOC120077739 [Benincasa hispida]4.3e-1458.33Show/hide
Query:  SCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        SCRVW+L EI CAHA  + R  NL+ Y+FV DYYF  T  STY   V+P GNHSEL  +DV +N LP +VKR
Subjt:  SCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

XP_038904248.1 uncharacterized protein LOC120090597 [Benincasa hispida]1.6e-1351.95Show/hide
Query:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        NLG+ SCRVWD +EISC+HAL +    N++ YS+VS+YY+S T S TY   V P G HS    +D D+ ALP + KR
Subjt:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]5.4e-1760.81Show/hide
Query:  SCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKRHL
        SC  WDL+EI CAHA  V    NL++Y+FVSDYYFS TFSSTY   +HP GNHS+ S +DVD N LP +VKR +
Subjt:  SCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKRHL

TrEMBL top hitse value%identityAlignment
A0A1S3CSI6 uncharacterized protein LOC1035044071.0e-1355.56Show/hide
Query:  SCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        +CRVWDLD+I CAHAL V R +++NTYSFVS Y+ S T  STYT  V P GNH+    I ++ N LP   KR
Subjt:  SCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

A0A1S4E6Q7 uncharacterized protein LOC1079923437.9e-1451.95Show/hide
Query:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        N  + SC  WDL+EISCAHAL V R  NLN Y+FVS YY++   S+TY   V P GNH++ S ++V+ N LP V +R
Subjt:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

A0A5D3BD68 SWIM-type domain-containing protein6.7e-1350.65Show/hide
Query:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        N  + SC  WDL+EI CAHAL V R  NLN Y+FVS YY++   S+TY   V P GNH++ S + V+ N LP V +R
Subjt:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

A0A5D3BEQ2 SWIM-type domain-containing protein7.9e-1451.95Show/hide
Query:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        N  + SC  WDL+EISCAHAL V R  NLN Y+FVS YY++   S+TY   V P GNH++ S ++V+ N LP V +R
Subjt:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

A0A5D3BVP4 SWIM-type domain-containing protein3.0e-1350.65Show/hide
Query:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR
        N  + SC  WDL+EI CAHAL V R  NLN Y+FVS YY++   S+TY   V P GNH++ S ++V+ N LP V +R
Subjt:  NLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSSTYTSFVHPAGNHSELSFIDVDMNALPSVVKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATTTTTACTTCCAGGCACTGCTCCAAGGTTGTTTGTTGCTGCCTCTGGCCGCTACTCGTTTGTTACTGTGTCATTCTATTATGGAGGAATATGACTTGTGAGAA
GTCTTTGGCTTTAAAAGAAAGCATAAAGCTTCTAAGATCCTCTTCTCGTGGATTTCGATCATCTCAGCTCTTCTTCGACCCGAACCTAGGAAATTTCAGTTGTCGTGTTT
GGGATCTTGATGAAATCTCATGTGCTCATGCACTCACTGTTTTTCGTAGGCAAAATTTGAATACTTATTCTTTTGTCTCAGATTATTACTTTTCAAGAACATTTTCATCA
ACTTATACAAGTTTTGTTCATCCAGCCGGTAATCATTCTGAATTGAGCTTTATAGATGTCGACATGAATGCGTTGCCTTCAGTTGTTAAACGTCACCTTGAAAACAGAGG
ATGCTATCAATTGGTAAAGTCAGCGGTGGTCGATAGTCAGAGGTCGATGGTGGTGTTTGATTGTCGGAGGTTTACGGTGGCGGTCGATAAACAAAGGTCAACAGTGGCTG
ATAGTCGAAGGTCGATGGTGACGGTCGATCGGAAGAGATTAACGACGGTCAGTAGTCGAAGGTCGACAGTAGTAATCGATCAACGAAGGTCGATCAGCAAAGGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCATTTTTACTTCCAGGCACTGCTCCAAGGTTGTTTGTTGCTGCCTCTGGCCGCTACTCGTTTGTTACTGTGTCATTCTATTATGGAGGAATATGACTTGTGAGAA
GTCTTTGGCTTTAAAAGAAAGCATAAAGCTTCTAAGATCCTCTTCTCGTGGATTTCGATCATCTCAGCTCTTCTTCGACCCGAACCTAGGAAATTTCAGTTGTCGTGTTT
GGGATCTTGATGAAATCTCATGTGCTCATGCACTCACTGTTTTTCGTAGGCAAAATTTGAATACTTATTCTTTTGTCTCAGATTATTACTTTTCAAGAACATTTTCATCA
ACTTATACAAGTTTTGTTCATCCAGCCGGTAATCATTCTGAATTGAGCTTTATAGATGTCGACATGAATGCGTTGCCTTCAGTTGTTAAACGTCACCTTGAAAACAGAGG
ATGCTATCAATTGGTAAAGTCAGCGGTGGTCGATAGTCAGAGGTCGATGGTGGTGTTTGATTGTCGGAGGTTTACGGTGGCGGTCGATAAACAAAGGTCAACAGTGGCTG
ATAGTCGAAGGTCGATGGTGACGGTCGATCGGAAGAGATTAACGACGGTCAGTAGTCGAAGGTCGACAGTAGTAATCGATCAACGAAGGTCGATCAGCAAAGGACGATAG
Protein sequenceShow/hide protein sequence
MFIFTSRHCSKVVCCCLWPLLVCYCVILLWRNMTCEKSLALKESIKLLRSSSRGFRSSQLFFDPNLGNFSCRVWDLDEISCAHALTVFRRQNLNTYSFVSDYYFSRTFSS
TYTSFVHPAGNHSELSFIDVDMNALPSVVKRHLENRGCYQLVKSAVVDSQRSMVVFDCRRFTVAVDKQRSTVADSRRSMVTVDRKRLTTVSSRRSTVVIDQRRSISKGR