| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG8482924.1 hypothetical protein CXB51_024275 [Gossypium anomalum] | 8.9e-33 | 43 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANSCVALS------------------------TMEAEYMAVTEAFKEGLWLRELVEEFG
MY MVC+RPDL++ +S VSRYMANPGKEH K L L + V L ++ AEYMA+TEA KE +WL+ L E
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANSCVALS------------------------TMEAEYMAVTEAFKEGLWLRELVEEFG
Query: EDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCI
EDL+ + V CDSQSA++L+K+Q FHERTKHIDVR+HF+RDII G I + KI ++ENP D +TK+LP+ K E C+
Subjt: EDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCI
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| KAG8485521.1 hypothetical protein CXB51_019057 [Gossypium anomalum] | 5.2e-33 | 42.03 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANSCVALS------------------------TMEAEYMAVTEAFKEGLWLRELVEEFG
MY MVC+RPDL++ +S VSRYMANPGKEH K L L + V L ++ AEYMA+TEA KE +WL+ L E
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANSCVALS------------------------TMEAEYMAVTEAFKEGLWLRELVEEFG
Query: EDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCI
EDL+ + V CDSQSA++L+K+Q FHERTKHIDVR+HF+RDII G I + KI ++ENP D +TK+LP+ K E C+
Subjt: EDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCI
Query: KALKIAR
+ + R
Subjt: KALKIAR
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| KAG8489970.1 hypothetical protein CXB51_015404 [Gossypium anomalum] | 5.2e-33 | 37.94 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCKL---------------------------------------------EILSANSC-----------VALS
MY MVC+RPDL++ +S VSRYMANPGKEH K + + C VALS
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCKL---------------------------------------------EILSANSC-----------VALS
Query: TMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIK
T EAEYMA+TEA KE +WL+ L E EDL+ + V CDSQSA++L+K+Q FHERTKHIDVR+HF+RDII G I
Subjt: TMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIK
Query: LKKIPSNENPTDGLTKTLPLAKLESCIKALKIARWRIVKIFAILRQMIKSHLY
+ KI ++ENP D +TK+LP+ K E C+ + R +V++F + M SH Y
Subjt: LKKIPSNENPTDGLTKTLPLAKLESCIKALKIARWRIVKIFAILRQMIKSHLY
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| KAG8495869.1 hypothetical protein CXB51_007704 [Gossypium anomalum] | 2.8e-34 | 42.79 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCKL-------------------EILSANSC-----------VALSTMEAEYMAVTEAFKEGLWLRELVEEF
MY MVC+RPDL++ +S VSRYMANPGKEH K + + C VALST EAEYMA+TEA KE +WL+ L E
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCKL-------------------EILSANSC-----------VALSTMEAEYMAVTEAFKEGLWLRELVEEF
Query: GEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESC
E L+ + V CDSQSA++L+K+Q FHERTKHIDVR+HF+RDII G I + KI ++ENP D +TK+LP+ K E C
Subjt: GEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESC
Query: IKALKIAR
+ ++ R
Subjt: IKALKIAR
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| KAG8496414.1 hypothetical protein CXB51_007522 [Gossypium anomalum] | 5.2e-33 | 40.83 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCKL------------------------------------EILSANSC-----------VALSTMEAEYMAV
MY MVC+RPDL++ +S VSRYMANPGKEH K + + C VALST EAEYMA+
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCKL------------------------------------EILSANSC-----------VALSTMEAEYMAV
Query: TEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNEN
TEA KE +WL+ L E EDL+ + V CDSQSA++L+K+Q FHERTKHIDVR+HF+RDII G I + KI ++EN
Subjt: TEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNEN
Query: PTDGLTKTLPLAKLESCI
P D +TK+LP+ K E C+
Subjt: PTDGLTKTLPLAKLESCI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9EYI8 Uncharacterized protein | 5.7e-33 | 43.9 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEH--------------CKLEIL--------------SANSCVALSTMEAEYMAVTEAFKEGLWLRELVEEFGE
MY MVCTRPDLAH +S VSRYMANPG+EH + EIL A+ VA+ST EAEYMAV EA KE LWL+ LV+E G
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEH--------------CKLEIL--------------SANSCVALSTMEAEYMAVTEAFKEGLWLRELVEEFGE
Query: DLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCIK
G ++HCDSQSA+YL+KNQ +H RTKHIDVRFH IR++I+ G I L+K+ ++EN D LTK + AK + C+
Subjt: DLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCIK
Query: ALKIA
+ ++
Subjt: ALKIA
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| A0A2N9FZX5 Integrase catalytic domain-containing protein | 3.7e-32 | 41.95 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK----------------------------LEILSANSCVALSTMEAEYMAVTEAFKEGLWLRELVEEFGE
MY MVCTRPDLAH +S VSRYMANPG+EH + + A+ VA+ST EAEYMAV EA KE LWL+ LV+E G
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK----------------------------LEILSANSCVALSTMEAEYMAVTEAFKEGLWLRELVEEFGE
Query: DLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCIK
G ++HCDSQSA+YL+KNQ +H RTKHI+VRFH IR++I+ G I L+K+ +++N TD LTK + AK + C+
Subjt: DLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCIK
Query: ALKIA
+ ++
Subjt: ALKIA
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| A0A2N9IN51 Integrase catalytic domain-containing protein | 1.3e-32 | 42.44 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK----------------------------LEILSANSCVALSTMEAEYMAVTEAFKEGLWLRELVEEFGE
MY MVCTRPDLAH +S VSRYMANPG+EH + + A+ VA+ST EAEYMAV EA KE LWL+ LV+E G
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK----------------------------LEILSANSCVALSTMEAEYMAVTEAFKEGLWLRELVEEFGE
Query: DLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCIK
G ++HCDSQSA+YL+KNQ +H RTKHIDVRFH IR++I+ G I L+K+ ++EN D LTK + AK + C+
Subjt: DLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESCIK
Query: ALKIA
+ ++
Subjt: ALKIA
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| A0A438IBT7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-31 | 43.01 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANS------------------CVALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEE
MY MVCTRPD+AH + VVS++M+NPGKEH L L S CVALST+EAE++A+TEA KE LWL++ ++E G LK+E
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANS------------------CVALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEE
Query: HEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESC
V +HCDSQSA++LSKN +FH R+KHIDVR+H+IRD++ + ++L+K+ +++N +D LTK L K E C
Subjt: HEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLESC
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| A0A6A3BFR2 Integrase catalytic domain-containing protein | 6.3e-32 | 42.57 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEIL--------------------------SANSCVALSTMEAEYMAVTEAFKEGLWLRELVEE
MY MVC RPDLA+ +SV+SR+MANPG+ H + L L + S VALST EAEY+AVTEA KE +WL+ +VEE
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEIL--------------------------SANSCVALSTMEAEYMAVTEAFKEGLWLRELVEE
Query: FGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLES
G ++ K + V CD+QS ++L KNQ FHER+KHIDV+ HF+RD+I +G I +KKIP+ ENP D L K LP+AK
Subjt: FGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIKLKKIPSNENPTDGLTKTLPLAKLES
Query: CI
C+
Subjt: CI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-10 | 32.54 | Show/hide |
Query: VALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILE
VA S+ EAEYMA+ EA +E LWL+ L+ ++K E+ +K ++ D+Q + ++ N + H+R KHID+++HF R+ +
Subjt: VALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILE
Query: GKIKLKKIPSNENPTDGLTKTLPLAK
I L+ IP+ D TK LP A+
Subjt: GKIKLKKIPSNENPTDGLTKTLPLAK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-29 | 36.28 | Show/hide |
Query: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANS---------------------------------------------------CVALS
MY MVCTRPD+AH + VVSR++ NPGKEH + L L + CVALS
Subjt: MYLMVCTRPDLAHGLSVVSRYMANPGKEHCK-----LEILSANS---------------------------------------------------CVALS
Query: TMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIK
T EAEY+A TE KE +WL+ ++E G KE + V+CDSQSA+ LSKN +H RTKHIDVR+H+IR+++ + +K
Subjt: TMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILEGKIK
Query: LKKIPSNENPTDGLTKTLPLAKLESC
+ KI +NENP D LTK +P K E C
Subjt: LKKIPSNENPTDGLTKTLPLAKLESC
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.8e-07 | 26.09 | Show/hide |
Query: VALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILE
V S+ EAEY +V E W+ L+ E G +R ++CD+ A YL N FH R KHI + +HFIR+ +
Subjt: VALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILE
Query: GKIKLKKIPSNENPTDGLTKTLPLAKLESCIKALKIAR
G +++ + +++ D LTK L ++ + + R
Subjt: GKIKLKKIPSNENPTDGLTKTLPLAKLESCIKALKIAR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.1e-07 | 29.51 | Show/hide |
Query: VALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILE
V S+ EAEY +V E W+ L+ E G L H + ++CD+ A YL N FH R KHI + +HFIR+ +
Subjt: VALSTMEAEYMAVTEAFKEGLWLRELVEEFGEDLKEEHEVKDWNSQFRYSGSNWTVRHKTLHEVHCDSQSAVYLSKNQTFHERTKHIDVRFHFIRDIILE
Query: GKIKLKKIPSNENPTDGLTKTL
G +++ + +++ D LTK L
Subjt: GKIKLKKIPSNENPTDGLTKTL
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