; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001671 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001671
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:34158258..34159303
RNA-Seq ExpressionLag0001671
SyntenyLag0001671
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACY01928.1 hypothetical protein [Beta vulgaris]1.4e-1836.14Show/hide
Query:  LRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNTDLQSHLSKSLASVFDLRLRKLEIPV
        L Q I+ +R S+S  V +AV K+V     E +Q  LA    +      +Q+++   K   R DE   E  E  + + +             R +KL++PV
Subjt:  LRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNTDLQSHLSKSLASVFDLRLRKLEIPV

Query:  FGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF
        F G NP  W+ + ER+F   RLTEDEK+E  V+ L+G AL W+ WEN+++    W + RW+LLRRF
Subjt:  FGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF

KAF7831606.1 Retrotransposable element Tf2 [Senna tora]8.6e-2133.95Show/hide
Query:  MATRMESRVENLEGRMLELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNT
        ++TRME RV+N++        EMAG++ E+  ++  I+T+ E          M   M   LARIEG +  + A +   S G    R  E+  E G G N 
Subjt:  MATRMESRVENLEGRMLELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNT

Query:  DLQSHLSKSLAS-VFDL-RLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGL
        + +  + +   +   +L R+R+LEI +F G +P+ WL +VERYF +N +  +EKL+ VV+C+EG AL W  W   ++    W +F+  LLRRF   ++G 
Subjt:  DLQSHLSKSLAS-VFDL-RLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGL

Query:  LHARKHRYSVLLLHK
             + Y +L+ HK
Subjt:  LHARKHRYSVLLLHK

KAF7836177.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Senna tora]8.6e-2132.86Show/hide
Query:  TRMESRVENLEGRMLELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNTDL
        TRME RV+N+E  M  +  EMA ++ +I+GI+                  + + M A LARIEG    +   +   S G N  R+ E   E G G N + 
Subjt:  TRMESRVENLEGRMLELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNTDL

Query:  QSHLSK-SLASVFDL-RLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLH
        +  + +  +    +  + R+LE+P+F G +P+ WL +VERYF +N +  +EKL+ V +C+EG AL W  W   ++    W +F+  LLRRF   ++G   
Subjt:  QSHLSK-SLASVFDL-RLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLH

Query:  ARKHRYSVLLLHK
           + Y +L+ HK
Subjt:  ARKHRYSVLLLHK

XP_022848903.1 uncharacterized protein LOC111371244 [Olea europaea var. sylvestris]1.8e-1835.45Show/hide
Query:  LEGRMLELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEG-SNTDLQSHLSKSL
        L  RM  L +   G++QE+     +I   ++  +S      +KE  + +L++ EG        Q    KGK V  S  +A    E  SN +     +K L
Subjt:  LEGRMLELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEG-SNTDLQSHLSKSL

Query:  ASV--FDLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEG
              D R R+LE+PVF G NP  WL + ERYF+IN  +  EK+E   +C EG AL W+ WE+ +Q+F  WED +  LL RF   +EG
Subjt:  ASV--FDLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEG

XP_038904464.1 uncharacterized protein LOC120090832 [Benincasa hispida]2.3e-1832.68Show/hide
Query:  MATRMESRVENLEGRM----LELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCND--QAEQIKKSKGKNVVRSDEVAIEV
        M  +ME+R+  +E ++    + +   M    +E+  I  S+      A+ +++   M   ++    ++E L+  +   +E+    +GK   R D     V
Subjt:  MATRMESRVENLEGRM----LELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCND--QAEQIKKSKGKNVVRSDEVAIEV

Query:  GEGSNTDLQSHLSKSLASVFDLRLRKLEIPVFG---GGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF
        GE           +    +FD+RLRKLEIP+F    G +P+ W H+VERYF +NRL+E +K+E  +LCLEG AL+WH WE ++     W  F+  LL RF
Subjt:  GEGSNTDLQSHLSKSLASVFDLRLRKLEIPVFG---GGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF

Query:  LVPKE
        L  KE
Subjt:  LVPKE

TrEMBL top hitse value%identityAlignment
A0A7J6E0Z8 Uncharacterized protein1.6e-1744.32Show/hide
Query:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHAR
        + R RK+E+PV+ G +P +W ++ +RYF + RL+  E+LE  ++CLEG AL W  WEN + + G WED + LL+RRF    EG ++ R
Subjt:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHAR

A0A7J6EPJ5 Uncharacterized protein2.5e-1848.86Show/hide
Query:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHAR
        + R R +E+PVF G +P DW  + ERYF + RLT +E+LE  +LCLEG AL+W  WEN+++   GW + + LLLRRFL   EG ++ R
Subjt:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHAR

A0A7J6GB68 Retrotrans_gag domain-containing protein2.1e-1747.73Show/hide
Query:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHAR
        + R R +E+P+F G +P DW ++ ERYF + RLT +E+LE  VLCLEG AL+W  WEN+++    W + + LLLRRFL   EG  + R
Subjt:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHAR

A0A7J6HRA8 Retrotrans_gag domain-containing protein3.3e-1848.31Show/hide
Query:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHARK
        + R R +E+P+F G +P DW ++VERYF + RLT +E+LE  VLCLEG AL+W  WEN+++    W + + LLLRRFL   EG  + R+
Subjt:  DLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHARK

E2DMZ5 Uncharacterized protein6.7e-1936.14Show/hide
Query:  LRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNTDLQSHLSKSLASVFDLRLRKLEIPV
        L Q I+ +R S+S  V +AV K+V     E +Q  LA    +      +Q+++   K   R DE   E  E  + + +             R +KL++PV
Subjt:  LRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNTDLQSHLSKSLASVFDLRLRKLEIPV

Query:  FGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF
        F G NP  W+ + ER+F   RLTEDEK+E  V+ L+G AL W+ WEN+++    W + RW+LLRRF
Subjt:  FGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein1.1e-1330.3Show/hide
Query:  GDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVA----IEVGEGSNTDLQSHLSKSLASVF----------------DLR---LRKLEIPVF
        GD  +  M+ +    + L C D+ +  +K +  + V    VA    +E+ EG   +   H  +S    F                D R   +R++E+PVF
Subjt:  GDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVA----IEVGEGSNTDLQSHLSKSLASVF----------------DLR---LRKLEIPVF

Query:  GGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF
         G    +W  +VER+F + R  + +KL++V L LEGVALKW   E     F  W  F   LL RF
Subjt:  GGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAAGAATGGAATCACGGGTAGAGAACCTTGAAGGAAGGATGCTAGAATTGAGCAAAGAAATGGCAGGATTGAGACAAGAAATTTCTGGAATTCGCGGATCAAT
TTCAACGGTAGTAGAAGCTGCTGTATCGAAAAGTGTGGGCGATGCCATGAAGGAAGGGATGCAAGCGATTCTTGCGAGGATCGAAGGATTGAGATGCAATGATCAAGCGG
AACAAATCAAGAAATCGAAAGGAAAAAACGTCGTCAGATCTGACGAGGTGGCCATAGAAGTAGGTGAAGGAAGCAATACGGATTTACAATCTCACCTGAGCAAATCTCTG
GCTTCGGTATTCGATCTCCGTCTGCGTAAACTTGAGATACCAGTTTTCGGTGGTGGAAATCCAGTGGATTGGTTGCATCAAGTAGAGCGATACTTCACCATAAATCGATT
AACGGAAGATGAAAAACTCGAAGTCGTCGTGCTCTGCCTTGAAGGCGTAGCGCTCAAATGGCATTATTGGGAAAACAAGCAACAATCGTTCGGTGGTTGGGAGGATTTTC
GCTGGTTGTTGTTGCGTAGATTCCTGGTGCCGAAAGAAGGGCTTCTTCACGCAAGAAAACACAGGTATTCCGTTCTTCTTCTTCACAAATTGCCGCTGCCGCTTGTTGCA
AGAGAAGTTGCCCTCGACACCGTTTCTTTTTCTTCTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACAAGAATGGAATCACGGGTAGAGAACCTTGAAGGAAGGATGCTAGAATTGAGCAAAGAAATGGCAGGATTGAGACAAGAAATTTCTGGAATTCGCGGATCAAT
TTCAACGGTAGTAGAAGCTGCTGTATCGAAAAGTGTGGGCGATGCCATGAAGGAAGGGATGCAAGCGATTCTTGCGAGGATCGAAGGATTGAGATGCAATGATCAAGCGG
AACAAATCAAGAAATCGAAAGGAAAAAACGTCGTCAGATCTGACGAGGTGGCCATAGAAGTAGGTGAAGGAAGCAATACGGATTTACAATCTCACCTGAGCAAATCTCTG
GCTTCGGTATTCGATCTCCGTCTGCGTAAACTTGAGATACCAGTTTTCGGTGGTGGAAATCCAGTGGATTGGTTGCATCAAGTAGAGCGATACTTCACCATAAATCGATT
AACGGAAGATGAAAAACTCGAAGTCGTCGTGCTCTGCCTTGAAGGCGTAGCGCTCAAATGGCATTATTGGGAAAACAAGCAACAATCGTTCGGTGGTTGGGAGGATTTTC
GCTGGTTGTTGTTGCGTAGATTCCTGGTGCCGAAAGAAGGGCTTCTTCACGCAAGAAAACACAGGTATTCCGTTCTTCTTCTTCACAAATTGCCGCTGCCGCTTGTTGCA
AGAGAAGTTGCCCTCGACACCGTTTCTTTTTCTTCTATTTAA
Protein sequenceShow/hide protein sequence
MATRMESRVENLEGRMLELSKEMAGLRQEISGIRGSISTVVEAAVSKSVGDAMKEGMQAILARIEGLRCNDQAEQIKKSKGKNVVRSDEVAIEVGEGSNTDLQSHLSKSL
ASVFDLRLRKLEIPVFGGGNPVDWLHQVERYFTINRLTEDEKLEVVVLCLEGVALKWHYWENKQQSFGGWEDFRWLLLRRFLVPKEGLLHARKHRYSVLLLHKLPLPLVA
REVALDTVSFSSI