; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001687 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001687
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:34284652..34285675
RNA-Seq ExpressionLag0001687
SyntenyLag0001687
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.7e-3738.3Show/hide
Query:  MEELIDQVDPPFTEKVMKAEVPQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLN
        +EEL+DQ D PFTE++M                         REKR            + ESL DY+TRFN E  QVEG ++  +L+A   G+ DE L  
Subjt:  MEELIDQVDPPFTEKVMKAEVPQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLN

Query:  SIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNL
        S GK  P T++E +SRA +YMSA E   SK      + S+    D K+++     +G R      R R  Q D   KFEKYT T++P EQ+LMEI+N  L
Subjt:  SIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNL

Query:  LSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR
        L  P+++ ++   R K +Y LFH DHGH+T++C  LK+E+E LI  GYLKE+  +       P+ T++  G+    P  EIR
Subjt:  LSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.7e-4536.66Show/hide
Query:  MEELIDQVDPPFTEKVMKAEVPQKFKL------------------------FQGFSPSIPCTVH-----------------------------------G
        +EEL+DQ D PFTE++M+ +VP KFKL                          G S ++ C V                                    G
Subjt:  MEELIDQVDPPFTEKVMKAEVPQKFKL------------------------FQGFSPSIPCTVH-----------------------------------G

Query:  AREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSS
         R + +P   LLT+KQ++ ESL DY+ RFN+E  QVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRA +YMSA E   SK+ E + KR+  
Subjt:  AREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSS

Query:  SNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIE
           D K+++     +G R      R R  Q D   KFEKYTPT++P EQ+LMEI++  LL  P+++K++   R K +Y LFHRDHGH+T++C  LK+E+E
Subjt:  SNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIE

Query:  ALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR
         LI+ GYLKE+  +       P+ T++  G+    P  EIR
Subjt:  ALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.0e-3640.91Show/hide
Query:  GAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSS
        G R + +P   LLT+KQ++ ESL DY+ RFN E  Q+E  ++  +L+A  +G+ DE L  S GK  P T++E +SRA +YMSA E   SK+ E + KR+ 
Subjt:  GAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSS

Query:  SSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEI
            D K+++     +G R      R R  Q D   KFEKYTPT++P EQ+LMEI++  LL  P+++K     R K +Y LFHRDH H+T++   LK+E+
Subjt:  SSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEI

Query:  EALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR
        E LI+ GYL+E+  +       P+ T++  G+    P  EIR
Subjt:  EALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]3.7e-3434.94Show/hide
Query:  PQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYM
        P     F   S         AR++ KP   LLTVKQQ GE+L DYI R+N+E  QV+GY +G AL  I  GL   +L  S+ K  P +Y+E ++RA KY 
Subjt:  PQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYM

Query:  SAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGR-----ADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGK
        +AEE  K++  E+          D ++++R    +    R      +    R  +    ++F  +T  + P+EQILM++RN  L   P  +K+NP  R  
Subjt:  SAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGR-----ADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGK

Query:  SQYFLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQRWPRP
        ++Y  FH+DHGH T  C +LK++IE+L++ G L+E+    E   +  +P
Subjt:  SQYFLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQRWPRP

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]5.3e-3340.74Show/hide
Query:  GAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSS
        GAR+++ P    L VKQ   ESL D ITRFN E  +VE YS+  AL  I  GL+  +   S+ K+  RT+ E +SRA KY + +EL  +       KR +
Subjt:  GAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSS

Query:  SSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYL-NKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDE
        +S+     +KR+  +E  + +    R        L ++F +YTP ++P+EQ+LM+IRN +LL  PK +K  P+ R +S+Y  +HRDH H+  +C  LK+E
Subjt:  SSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYL-NKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDE

Query:  IEALIQNGYLKEFTTK
        I++LIQ GYLKEF  K
Subjt:  IEALIQNGYLKEFTTK

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.3e-3738.3Show/hide
Query:  MEELIDQVDPPFTEKVMKAEVPQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLN
        +EEL+DQ D PFTE++M                         REKR            + ESL DY+TRFN E  QVEG ++  +L+A   G+ DE L  
Subjt:  MEELIDQVDPPFTEKVMKAEVPQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLN

Query:  SIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNL
        S GK  P T++E +SRA +YMSA E   SK      + S+    D K+++     +G R      R R  Q D   KFEKYT T++P EQ+LMEI+N  L
Subjt:  SIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNL

Query:  LSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR
        L  P+++ ++   R K +Y LFH DHGH+T++C  LK+E+E LI  GYLKE+  +       P+ T++  G+    P  EIR
Subjt:  LSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR

A0A6J1DWY0 uncharacterized protein LOC1110252931.3e-4536.66Show/hide
Query:  MEELIDQVDPPFTEKVMKAEVPQKFKL------------------------FQGFSPSIPCTVH-----------------------------------G
        +EEL+DQ D PFTE++M+ +VP KFKL                          G S ++ C V                                    G
Subjt:  MEELIDQVDPPFTEKVMKAEVPQKFKL------------------------FQGFSPSIPCTVH-----------------------------------G

Query:  AREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSS
         R + +P   LLT+KQ++ ESL DY+ RFN+E  QVEG ++  +L+A  +G+ DE L  S GK  P T++E +SRA +YMSA E   SK+ E + KR+  
Subjt:  AREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSSS

Query:  SNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIE
           D K+++     +G R      R R  Q D   KFEKYTPT++P EQ+LMEI++  LL  P+++K++   R K +Y LFHRDHGH+T++C  LK+E+E
Subjt:  SNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEIE

Query:  ALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR
         LI+ GYLKE+  +       P+ T++  G+    P  EIR
Subjt:  ALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR

A0A6J1DYL6 uncharacterized protein LOC1110257855.0e-3740.91Show/hide
Query:  GAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSS
        G R + +P   LLT+KQ++ ESL DY+ RFN E  Q+E  ++  +L+A  +G+ DE L  S GK  P T++E +SRA +YMSA E   SK+ E + KR+ 
Subjt:  GAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYMSAEELLKSKKTEREHKRSS

Query:  SSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEI
            D K+++     +G R      R R  Q D   KFEKYTPT++P EQ+LMEI++  LL  P+++K     R K +Y LFHRDH H+T++   LK+E+
Subjt:  SSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFLFHRDHGHSTRNCIQLKDEI

Query:  EALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR
        E LI+ GYL+E+  +       P+ T++  G+    P  EIR
Subjt:  EALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR

A0A7N2LNH8 Ribonuclease H1.3e-2936.82Show/hide
Query:  PQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYM
        P     F+  S        G    +K    L+ +KQ+  E+L  YI+RFN EA  ++   +   + A T GL+  + L S+ K+ P+T +E + RA KYM
Subjt:  PQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYM

Query:  SAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFL
        +AE+ L S++ +R  KR      DS++D+ ++    G  R D  R +P  G    +F  +TP + P +Q+LM+I++   L+ P KLKS+P  R + +Y  
Subjt:  SAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFL

Query:  FHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQ
        FHRDHGH T +C  LK +IEALI+ G L++F  K  TDQ
Subjt:  FHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQ

A0A7N2N013 Ribonuclease H6.0e-3036.82Show/hide
Query:  PQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYM
        P     F+  S        G    +K    L+ +KQ+  E+L  YI+RFN EA  ++   +   + A T GL+  + L S+ K+ P+T +E + RA KYM
Subjt:  PQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFISRAHKYM

Query:  SAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFL
        +AE+ L S++ +R  KR      DS++D+ ++    G  R D  R +P  G    +F  +TP + P +Q+LM+I++   L+ P KLKS+P  R + +Y  
Subjt:  SAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYFL

Query:  FHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQ
        FHRDHGH T +C  LK +IEALI+ G L++F  K  TDQ
Subjt:  FHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACTAATCGACCAAGTCGACCCACCCTTCACAGAAAAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGCTGTTTCAAGGATTTAGCCCGAGCATTCCTTG
CACAGTTCATGGGGCCAGAGAAAAGCGAAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGTCAGGTGAGAGCTTGTGTGATTACATAACGCGTTTTAACGACGAAG
CACCGCAGGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGACTGGAAGACGAAAGACTACTCAACTCAATAGGTAAGAGCCAACCTCGAACCTAT
GCAGAGTTCATCTCTCGAGCACACAAATACATGAGTGCAGAGGAGTTGCTCAAGTCAAAGAAGACGGAACGAGAGCACAAAAGGTCTTCTTCATCTAACTACGACAGTAA
GAAGGACAAAAGGCAGCAGACCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAATAAGTTTGAAAAGTACACCCCTA
CTTCAATCCCACAGGAGCAGATCTTGATGGAGATAAGGAACACAAACCTACTCAGCGCACCCAAGAAGCTGAAGTCAAATCCTGACAACAGAGGCAAAAGCCAGTATTTT
CTCTTCCATCGAGATCATGGACATTCAACCAGGAACTGCATTCAGCTGAAAGACGAGATCGAAGCGTTGATCCAAAACGGATACCTGAAGGAATTCACCACAAAGGTCGA
GACCGACCAGAGATGGCCGAGGCCGACTAGAGATGACCCGGGCAAAGATGGTGGTGGACCTCTTCTGGAAATCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACTAATCGACCAAGTCGACCCACCCTTCACAGAAAAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGCTGTTTCAAGGATTTAGCCCGAGCATTCCTTG
CACAGTTCATGGGGCCAGAGAAAAGCGAAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGTCAGGTGAGAGCTTGTGTGATTACATAACGCGTTTTAACGACGAAG
CACCGCAGGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGACTGGAAGACGAAAGACTACTCAACTCAATAGGTAAGAGCCAACCTCGAACCTAT
GCAGAGTTCATCTCTCGAGCACACAAATACATGAGTGCAGAGGAGTTGCTCAAGTCAAAGAAGACGGAACGAGAGCACAAAAGGTCTTCTTCATCTAACTACGACAGTAA
GAAGGACAAAAGGCAGCAGACCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAATAAGTTTGAAAAGTACACCCCTA
CTTCAATCCCACAGGAGCAGATCTTGATGGAGATAAGGAACACAAACCTACTCAGCGCACCCAAGAAGCTGAAGTCAAATCCTGACAACAGAGGCAAAAGCCAGTATTTT
CTCTTCCATCGAGATCATGGACATTCAACCAGGAACTGCATTCAGCTGAAAGACGAGATCGAAGCGTTGATCCAAAACGGATACCTGAAGGAATTCACCACAAAGGTCGA
GACCGACCAGAGATGGCCGAGGCCGACTAGAGATGACCCGGGCAAAGATGGTGGTGGACCTCTTCTGGAAATCCGTTGA
Protein sequenceShow/hide protein sequence
MEELIDQVDPPFTEKVMKAEVPQKFKLFQGFSPSIPCTVHGAREKRKPHINLLTVKQQSGESLCDYITRFNDEAPQVEGYSEGAALVAITAGLEDERLLNSIGKSQPRTY
AEFISRAHKYMSAEELLKSKKTEREHKRSSSSNYDSKKDKRQQTDEGGRGRADHGRGRPDQGDYLNKFEKYTPTSIPQEQILMEIRNTNLLSAPKKLKSNPDNRGKSQYF
LFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKVETDQRWPRPTRDDPGKDGGGPLLEIR