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Lag0001692 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001692
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGermin-like protein
Genome locationchr4:34334096..34336254
RNA-Seq ExpressionLag0001692
SyntenyLag0001692
Gene Ontology termsGO:0010497 - plasmodesmata-mediated intercellular transport (biological process)
GO:2000280 - regulation of root development (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0016020 - membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0030145 - manganese ion binding (molecular function)
InterPro domainsIPR006045 - Cupin 1
IPR014710 - RmlC-like jelly roll fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050257.1 germin-like protein subfamily 2 member 4 [Cucumis melo var. makuwa]1.2e-1059.38Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA +A   AINNSVGS VTPANVDKIP  +T G+S A ++Y+P+ GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

KAE8648309.1 hypothetical protein Csa_004652 [Cucumis sativus]1.4e-1160.94Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA +A   AINNS+GSAVTPANV+KIP  +T G+S A ++Y PNDGLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

XP_004151229.1 germin-like protein subfamily 2 member 4 [Cucumis sativus]1.4e-1160.94Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA +A   AINNS+GSAVTPANV+KIP  +T G+S A ++Y PNDGLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

XP_008466192.1 PREDICTED: germin-like protein subfamily 2 member 4 [Cucumis melo]3.2e-1160.94Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++ S+FFFA +A   AINNSVGSAVTPANVDKIP  +T G+S A ++Y+PN GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

XP_038877903.1 germin-like protein subfamily 2 member 4 [Benincasa hispida]1.2e-1062.5Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA +AK  AINNSVGSAVT ANVDKIP  +T GIS A ++Y+P+ GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ7 Germin-like protein6.9e-1260.94Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA +A   AINNS+GSAVTPANV+KIP  +T G+S A ++Y PNDGLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

A0A1S3CQM8 Germin-like protein1.5e-1160.94Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++ S+FFFA +A   AINNSVGSAVTPANVDKIP  +T G+S A ++Y+PN GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

A0A5A7U7A8 Germin-like protein5.9e-1159.38Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA +A   AINNSVGS VTPANVDKIP  +T G+S A ++Y+P+ GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

A0A6J1CXW0 Germin-like protein6.5e-1059.38Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++A +FFFA +A   AINNSVGSAVT ANVDKIP  +T G+S A V+Y+P  GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

A0A6J1FJE7 Germin-like protein1.4e-0954.69Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++A++FFF  +A    INNSVGS VTPANVDKIP  +T G+S A ++YA + GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

SwissProt top hitse value%identityAlignment
O65252 Probable germin-like protein subfamily 2 member 51.5e-0846.88Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++  +F+F  +A + A N S GS VT ANV+K+P  +T G+S + ++YAPN GLN PH  PR+S
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

P93000 Germin-like protein subfamily 2 member 31.4e-0646.15Show/hide
Query:  LSASNFFFARIAKVTA-INNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++  +F+F  +A   A  N+S+GSAVT ANV+K+P  +T G+S + ++YAP  GLN PH  PR+S
Subjt:  LSASNFFFARIAKVTA-INNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

Q9FZ27 Germin-like protein subfamily 2 member 23.1e-0951.52Show/hide
Query:  LFLSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        L ++ S+FFFA I+K   IN+++GSAVT ANV+KIP  +T  +S A ++YAP  GLN PH  PR++
Subjt:  LFLSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

Q9M263 Germin-like protein subfamily 2 member 43.7e-1054.69Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA I K   +NN+VGSAVT ANV+KI   +T G+S A ++YAP  GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

Q9S8P4 Rhicadhesin receptor8.5e-0746.88Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++A +FF   + K  A NN+ GS VT ANV +IP  +T G+S A ++YAP  GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

Arabidopsis top hitse value%identityAlignment
AT1G02335.1 germin-like protein subfamily 2 member 2 precursor2.2e-1051.52Show/hide
Query:  LFLSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        L ++ S+FFFA I+K   IN+++GSAVT ANV+KIP  +T  +S A ++YAP  GLN PH  PR++
Subjt:  LFLSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

AT3G05930.1 germin-like protein 81.0e-0746.15Show/hide
Query:  LSASNFFFARIAKVTA-INNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++  +F+F  +A   A  N+S+GSAVT ANV+K+P  +T G+S + ++YAP  GLN PH  PR+S
Subjt:  LSASNFFFARIAKVTA-INNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

AT3G62020.1 germin-like protein 102.6e-1154.69Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA I K   +NN+VGSAVT ANV+KI   +T G+S A ++YAP  GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

AT3G62020.2 germin-like protein 102.6e-1154.69Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++AS+FFFA I K   +NN+VGSAVT ANV+KI   +T G+S A ++YAP  GLN PH  PR++
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS

AT5G26700.1 RmlC-like cupins superfamily protein1.1e-0946.88Show/hide
Query:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS
        ++  +F+F  +A + A N S GS VT ANV+K+P  +T G+S + ++YAPN GLN PH  PR+S
Subjt:  LSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATATGCTCCTCCCCGACGCCGTCGAAATCCTCCCACCGCCGCCGAACCCCTCTTCTTCTCACCATCTCTTCCTCTCGGCCTCAAATTTCTTCTTCGCCAGAAT
AGCCAAAGTCACCGCCATTAACAACTCCGTCGGATCTGCCGTGACGCCGGCTAACGTCGACAAAATCCCCGACCACAGCACCTTCGGCATCTCCCCCGCCTGCGTCAACT
ACGCTCCCAACGACGGCCTCAACCTGCCCCACGCGCCACCGAGATCGTCTTCGCCGCCTTCAACAACCAACTGCCTGGAACTATGTCGGTCGTCGCTGCCCTGTTCAGCG
CCTCCCCCACCGTGGATGACGGCGTCCTCGCCAAAGCCTTCCAGATTGGGGCCGATGAGGAACCTATTAGAAACTCACTCGAAACATGAGGACGAAAAAGCAAAGGCAAT
TTTGGAGGGAGTTGTGAATGTTGACCTCTTAGAACTGTCCTTCATCGCCAAGGAAATTGAAGACCGAATGAATGAAGGGAATATATCTCCTTCTTCAAATGCTCCAGGGA
GACCAATCTTTTGGCCCATTCTATCGTGGATGAAGCCAATTATGGCTGACAACTTCTTTGTTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATATGCTCCTCCCCGACGCCGTCGAAATCCTCCCACCGCCGCCGAACCCCTCTTCTTCTCACCATCTCTTCCTCTCGGCCTCAAATTTCTTCTTCGCCAGAAT
AGCCAAAGTCACCGCCATTAACAACTCCGTCGGATCTGCCGTGACGCCGGCTAACGTCGACAAAATCCCCGACCACAGCACCTTCGGCATCTCCCCCGCCTGCGTCAACT
ACGCTCCCAACGACGGCCTCAACCTGCCCCACGCGCCACCGAGATCGTCTTCGCCGCCTTCAACAACCAACTGCCTGGAACTATGTCGGTCGTCGCTGCCCTGTTCAGCG
CCTCCCCCACCGTGGATGACGGCGTCCTCGCCAAAGCCTTCCAGATTGGGGCCGATGAGGAACCTATTAGAAACTCACTCGAAACATGAGGACGAAAAAGCAAAGGCAAT
TTTGGAGGGAGTTGTGAATGTTGACCTCTTAGAACTGTCCTTCATCGCCAAGGAAATTGAAGACCGAATGAATGAAGGGAATATATCTCCTTCTTCAAATGCTCCAGGGA
GACCAATCTTTTGGCCCATTCTATCGTGGATGAAGCCAATTATGGCTGACAACTTCTTTGTTGGCTAA
Protein sequenceShow/hide protein sequence
MKNMLLPDAVEILPPPPNPSSSHHLFLSASNFFFARIAKVTAINNSVGSAVTPANVDKIPDHSTFGISPACVNYAPNDGLNLPHAPPRSSSPPSTTNCLELCRSSLPCSA
PPPPWMTASSPKPSRLGPMRNLLETHSKHEDEKAKAILEGVVNVDLLELSFIAKEIEDRMNEGNISPSSNAPGRPIFWPILSWMKPIMADNFFVG