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Lag0001703 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001703
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncytochrome b6f complex subunit (petM), putative
Genome locationchr4:34494094..34494459
RNA-Seq ExpressionLag0001703
SyntenyLag0001703
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572003.1 Cytochrome b6-f complex subunit 7, partial [Cucurbita argyrosperma subsp. sororia]6.6e-4988.71Show/hide
Query:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN
        AT SATLSP +STAAPI    RRQRNTNVHYITG+NSF GLKAHNN+ SLGLPVCAD+SFANIVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

XP_008454894.1 PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]6.0e-5090.4Show/hide
Query:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII
        MATASATLS AMSTAAPI    RRQR TNVHYITG+NSFGGLKAHNNVVSLGLPVCAD+SFA IVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]1.2e-5091.13Show/hide
Query:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN
        ATASATLSPA+STAAPI    RRQRNTNVHYITG+NSFGGLKAHNN+ SLGLPVCAD+SFANIVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

XP_023554105.1 uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]1.7e-4989.52Show/hide
Query:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN
        ATASATLSP +STAAPI    RRQRN NVHYITG+NSFGGLKAHNN+ SLGLPVCAD+SFANIVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

XP_038887487.1 uncharacterized protein LOC120077620 [Benincasa hispida]1.2e-5090.4Show/hide
Query:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII
        MATASATLSPAM TAAPI    RRQR TNVHYITG+NSFGGLKAHNNVVSLGLPVCAD+SFANI+SSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K4W4 Uncharacterized protein1.0e-4786.4Show/hide
Query:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII
        MATASATLS AMS+AAPI    RRQR TN H+I+G+NSF GLKAHNNVVSLGLPVCAD+SFA IVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

A0A1S3C0U4 uncharacterized protein LOC1034952012.9e-5090.4Show/hide
Query:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII
        MATASATLS AMSTAAPI    RRQR TNVHYITG+NSFGGLKAHNNVVSLGLPVCAD+SFA IVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

A0A6J1C3G5 uncharacterized protein LOC1110080074.3e-4685.16Show/hide
Query:  MATASATLSPAMSTAAPI-----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRS--GGGALSSTCNAAGEIFRIA
        MATASATLSPAMSTAAPI     R QR+ NVHYITG+NSFGGLKAHNNVVSLGLP+C D SFA IVSSLKYPSKGKG++  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPI-----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRS--GGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEASVEEAE
        AIINGLVLVGVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLVGVAVGFVLLRIEASVEEAE

A0A6J1GND2 uncharacterized protein LOC1114555031.2e-4887.9Show/hide
Query:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN
        AT SATLSP +STAAPI    RRQRNTNVHYITG+NSF GLKAHNN+ SLGLPVCAD+SFA+IVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

A0A6J1I5T0 uncharacterized protein LOC1114709415.9e-5191.13Show/hide
Query:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN
        ATASATLSPA+STAAPI    RRQRNTNVHYITG+NSFGGLKAHNN+ SLGLPVCAD+SFANIVSSLKYPSKGKG++GGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPI----RRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)7.7e-0883.33Show/hide
Query:  NAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASVEE
        NAA EIFRIAA++NGL LVGVA+GFVLLRIEA+VEE
Subjt:  NAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative1.8e-2859.69Show/hide
Query:  MATASA------TLSPAMSTAAPIRRQRNTNVHYITGINSFGGLKAHNN-VVSLGLPVCADRSFANIVSSLKYPSKGKGRSG-GGALSSTCNAAGEIFRI
        MATA+A      T S  +S +   +++    V YITG+NS+GGLKA NN VVS+G P+C ++ FAN+V SL      KGR G GGALS+TCNA GEIF+I
Subjt:  MATASA------TLSPAMSTAAPIRRQRNTNVHYITGINSFGGLKAHNN-VVSLGLPVCADRSFANIVSSLKYPSKGKGRSG-GGALSSTCNAAGEIFRI

Query:  AAIINGLVLVGVAVGFVLLRIEASVEEAE
        AAI+N L LVGVAVGFVLLRIE SVEEAE
Subjt:  AAIINGLVLVGVAVGFVLLRIEASVEEAE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative1.8e-2859.69Show/hide
Query:  MATASA------TLSPAMSTAAPIRRQRNTNVHYITGINSFGGLKAHNN-VVSLGLPVCADRSFANIVSSLKYPSKGKGRSG-GGALSSTCNAAGEIFRI
        MATA+A      T S  +S +   +++    V YITG+NS+GGLKA NN VVS+G P+C ++ FAN+V SL      KGR G GGALS+TCNA GEIF+I
Subjt:  MATASA------TLSPAMSTAAPIRRQRNTNVHYITGINSFGGLKAHNN-VVSLGLPVCADRSFANIVSSLKYPSKGKGRSG-GGALSSTCNAAGEIFRI

Query:  AAIINGLVLVGVAVGFVLLRIEASVEEAE
        AAI+N L LVGVAVGFVLLRIE SVEEAE
Subjt:  AAIINGLVLVGVAVGFVLLRIEASVEEAE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative9.0e-1239.84Show/hide
Query:  MATASA------TLSPAMSTAAPIRRQRNTNVHYITGINSFGGLKAHNN-VVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIA
        MATA+A      T S  +S +   +++    V YITG+NS+GGLKA NN VVS+G P+C ++ FAN+V SLK                            
Subjt:  MATASA------TLSPAMSTAAPIRRQRNTNVHYITGINSFGGLKAHNN-VVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRIEASVEEAE
                 G  VGFVLLRIE SVEEAE
Subjt:  AIINGLVLVGVAVGFVLLRIEASVEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGCCTCCGCTACCCTCTCGCCGGCCATGTCCACCGCCGCCCCCATCAGGCGGCAGAGGAACACCAATGTCCATTACATCACCGGCATCAATTCCTTTGGTGG
CTTGAAAGCTCACAACAATGTCGTCTCCCTGGGCCTTCCCGTTTGTGCTGATCGGTCCTTTGCAAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAAGGCAGAA
GCGGCGGTGGGGCTCTCTCTTCCACCTGTAATGCTGCCGGTGAGATTTTCAGGATTGCCGCCATTATCAATGGGCTTGTTCTCGTTGGTGTGGCTGTGGGGTTTGTTCTT
CTCCGGATTGAGGCGTCTGTGGAGGAGGCTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCGCCTCCGCTACCCTCTCGCCGGCCATGTCCACCGCCGCCCCCATCAGGCGGCAGAGGAACACCAATGTCCATTACATCACCGGCATCAATTCCTTTGGTGG
CTTGAAAGCTCACAACAATGTCGTCTCCCTGGGCCTTCCCGTTTGTGCTGATCGGTCCTTTGCAAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAAGGCAGAA
GCGGCGGTGGGGCTCTCTCTTCCACCTGTAATGCTGCCGGTGAGATTTTCAGGATTGCCGCCATTATCAATGGGCTTGTTCTCGTTGGTGTGGCTGTGGGGTTTGTTCTT
CTCCGGATTGAGGCGTCTGTGGAGGAGGCTGAGTGA
Protein sequenceShow/hide protein sequence
MATASATLSPAMSTAAPIRRQRNTNVHYITGINSFGGLKAHNNVVSLGLPVCADRSFANIVSSLKYPSKGKGRSGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVL
LRIEASVEEAE