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Lag0001708 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001708
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:34536502..34537485
RNA-Seq ExpressionLag0001708
SyntenyLag0001708
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019159671.1 PREDICTED: uncharacterized protein LOC109156272 [Ipomoea nil]2.7e-1947.32Show/hide
Query:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGW--WRLTGFYGN
        G G P A++ L   V Q  P ++FL ETK    R+E ++  L FD CF V+++E  GGLA LW S I++ V+ YS+ +IDS+V   +G+  WRLTG+YGN
Subjt:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGW--WRLTGFYGN

Query:  LETSKRKDSWNL
         E S+R++SWNL
Subjt:  LETSKRKDSWNL

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]4.5e-1947.75Show/hide
Query:  PGFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGWWRLTGFYGNL
        PG G P   R L++ V++  PQ+VFL+ETK   +     KR L FD C +V S  +SGGL  LW S+ N+ ++S S GHIDS++    G WR TGFYGN 
Subjt:  PGFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGWWRLTGFYGNL

Query:  ETSKRKDSWNL
         T KR  SW L
Subjt:  ETSKRKDSWNL

XP_042939392.1 uncharacterized protein LOC122274417 [Carya illinoinensis]1.6e-1950.89Show/hide
Query:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGW--WRLTGFYGN
        G G P  V  L   VQ  SP+ VFL ETK   ++VE +KR L FD  F VNS   SGGLAFLWK ++   V SY+  HI  +V+  KG   W LTGFYGN
Subjt:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGW--WRLTGFYGN

Query:  LETSKRKDSWNL
          T+KR++SW L
Subjt:  LETSKRKDSWNL

XP_042952137.1 uncharacterized protein LOC122289225 [Carya illinoinensis]1.2e-1947.32Show/hide
Query:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSK--GWWRLTGFYGN
        G G P AVR L   +++  P +VFL ETKC+ SR+E +K +  FDYC AV+S   SGGLA +WK+ + + + S++  HI  M+   +    W LTGFYG+
Subjt:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSK--GWWRLTGFYGN

Query:  LETSKRKDSWNL
          TSKRK SWNL
Subjt:  LETSKRKDSWNL

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]4.5e-1943.24Show/hide
Query:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSK--GWWRLTGFYGN
        G G P  VR L+  V++  P ++FL ETK   +++E +KR+L ++ CFAV+S  +SGGLA +W+ E NL V+SYS  HID+++ +++  G W+ TG YG+
Subjt:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSK--GWWRLTGFYGN

Query:  LETSKRKDSWN
         +T  R+++WN
Subjt:  LETSKRKDSWN

TrEMBL top hitse value%identityAlignment
A0A2I4FJD0 uncharacterized protein LOC1089993244.9e-1945.54Show/hide
Query:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGW--WRLTGFYGN
        G G P  V  L   V + SP  VFL ETKC+ +R+E +K+ L  D  F ++   + GGLAFLW+ E+   V +Y+  HI  MV+ ++G   W LTGFYGN
Subjt:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGW--WRLTGFYGN

Query:  LETSKRKDSWNL
          TS+RK+SW L
Subjt:  LETSKRKDSWNL

A0A2N9G1F9 Uncharacterized protein6.4e-1947.75Show/hide
Query:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKG-WWRLTGFYGNL
        G G P AVR L H V++  P+++FL ETK    R+E I+  L FD  F V S  +SGGLA LWK++  + +++YS  HID+ V S K   WRLTGFYG  
Subjt:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKG-WWRLTGFYGNL

Query:  ETSKRKDSWNL
        E  +R++SW L
Subjt:  ETSKRKDSWNL

A0A2N9G1M2 Uncharacterized protein2.9e-1947.83Show/hide
Query:  LERPGFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKG-WWRLTGF
        LE  G G P AVR L H V++  P+++FL ETK    R+E I+  L FD  F V S  +SGGLA LWK++  + +++YS  HID+ V S K   WRLTGF
Subjt:  LERPGFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKG-WWRLTGF

Query:  YGNLETSKRKDSWNL
        YG  E  +R++SW L
Subjt:  YGNLETSKRKDSWNL

A0A2N9I611 Uncharacterized protein7.5e-2045.45Show/hide
Query:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGWWRLTGFYGNLE
        G G P AVR L+   +  +P+++FL+ETK     +E+I+  L +D  F V S  +SGGLA LW  +++L + SY+  HID+ ++S +G WR TGFYG+ E
Subjt:  GFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGWWRLTGFYGNLE

Query:  TSKRKDSWNL
        T+KRK SW L
Subjt:  TSKRKDSWNL

A0A6J1DUG8 uncharacterized protein LOC1110241352.2e-1947.75Show/hide
Query:  PGFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGWWRLTGFYGNL
        PG G P   R L++ V++  PQ+VFL+ETK   +     KR L FD C +V S  +SGGL  LW S+ N+ ++S S GHIDS++    G WR TGFYGN 
Subjt:  PGFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGWWRLTGFYGNL

Query:  ETSKRKDSWNL
         T KR  SW L
Subjt:  ETSKRKDSWNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGGTGATCAACGGGAAGAAGCTAGAGAAATGCCCGACGGTAATGGCAGCAGAGCTCCGATGGAACGATTACCCAGAAAAGGCTCAGAAGAAGATAGGAAAAAG
CAAAGGAAATCGTGGAAAAGAAGAGCTCGAGAAGGAAGGATGGCAGAGGAGATTGAGAAAGGAAAACATCAACAACAGTCTACTAGAAAACATGAAAGGGAAGAACAGTG
GGAGGAAGGGCAAGCAAAGAAGTTCCGATCAAACTACTTCGGCAATGCCGTTGGGATATCGGCGGAGGCTGCGGAGCAGCCCCGCCGGACGCCGTGAGGACGTTATTTTG
GAACGTCCGGGGTTTGGGGAACCCCCGGCGGTCCGCAATTTAAAGCACGAAGTGCAGCAAATATCCCCTCAAATTGTGTTTTTAGCTGAAACTAAATGCACCGATAGTAG
AGTAGAATTCATAAAGAGAATTCTGGTTTTTGATTACTGCTTTGCCGTGAACAGCAACGAGCAAAGTGGAGGTCTCGCGTTCTTGTGGAAGTCTGAGATTAATCTATGTG
TCAAAAGCTACTCTTCAGGACATATAGATTCAATGGTTCAGTCTAGTAAAGGTTGGTGGAGGCTTACTGGCTTTTATGGAAATCTCGAAACATCCAAAAGGAAAGATTCT
TGGAATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGGTGATCAACGGGAAGAAGCTAGAGAAATGCCCGACGGTAATGGCAGCAGAGCTCCGATGGAACGATTACCCAGAAAAGGCTCAGAAGAAGATAGGAAAAAG
CAAAGGAAATCGTGGAAAAGAAGAGCTCGAGAAGGAAGGATGGCAGAGGAGATTGAGAAAGGAAAACATCAACAACAGTCTACTAGAAAACATGAAAGGGAAGAACAGTG
GGAGGAAGGGCAAGCAAAGAAGTTCCGATCAAACTACTTCGGCAATGCCGTTGGGATATCGGCGGAGGCTGCGGAGCAGCCCCGCCGGACGCCGTGAGGACGTTATTTTG
GAACGTCCGGGGTTTGGGGAACCCCCGGCGGTCCGCAATTTAAAGCACGAAGTGCAGCAAATATCCCCTCAAATTGTGTTTTTAGCTGAAACTAAATGCACCGATAGTAG
AGTAGAATTCATAAAGAGAATTCTGGTTTTTGATTACTGCTTTGCCGTGAACAGCAACGAGCAAAGTGGAGGTCTCGCGTTCTTGTGGAAGTCTGAGATTAATCTATGTG
TCAAAAGCTACTCTTCAGGACATATAGATTCAATGGTTCAGTCTAGTAAAGGTTGGTGGAGGCTTACTGGCTTTTATGGAAATCTCGAAACATCCAAAAGGAAAGATTCT
TGGAATCTTTGA
Protein sequenceShow/hide protein sequence
MEGVINGKKLEKCPTVMAAELRWNDYPEKAQKKIGKSKGNRGKEELEKEGWQRRLRKENINNSLLENMKGKNSGRKGKQRSSDQTTSAMPLGYRRRLRSSPAGRREDVIL
ERPGFGEPPAVRNLKHEVQQISPQIVFLAETKCTDSRVEFIKRILVFDYCFAVNSNEQSGGLAFLWKSEINLCVKSYSSGHIDSMVQSSKGWWRLTGFYGNLETSKRKDS
WNL