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Lag0001717 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001717
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:34630434..34633494
RNA-Seq ExpressionLag0001717
SyntenyLag0001717
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031272.1 hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa]2.3e-1076.47Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
        M IQRLELCLELLRMA+NFVVVVAESVG+VIH+E QP   P A  RVP+PF
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
MBA0799196.1 hypothetical protein [Gossypium harknessii]1.9e-0460.38Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPP----HRPAATPRVPI
        M +QRLE+C+EL+++AV FVVVVAE+VG VIHQ   PP     RP ATP VP+
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPP----HRPAATPRVPI
XP_015874275.1 uncharacterized protein LOC107411246 [Ziziphus jujuba]3.2e-0452.94Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
        M IQR+E+C+ELL+MA+ FV+VVAE+VG VIHQ   P    ++    P+PF
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
TrEMBL top hitse value%identityAlignment
A0A0A0K3A1 Uncharacterized protein1.1e-1076.47Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
        M IQRLELCLELLRMA+NFVVVVAESVG+VIH+E QP   P A  RVP+PF
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
A0A5D2M247 Uncharacterized protein7.6e-0458.49Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPP----HRPAATPRVPI
        M +QRLE+C+EL+++AV FVVVVAE+VG VIHQ   PP     R  ATP VP+
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPP----HRPAATPRVPI
A0A5D3C626 Uncharacterized protein1.1e-1076.47Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
        M IQRLELCLELLRMA+NFVVVVAESVG+VIH+E QP   P A  RVP+PF
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
A0A6P3ZHL2 uncharacterized protein LOC1074112461.5e-0452.94Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
        M IQR+E+C+ELL+MA+ FV+VVAE+VG VIHQ   P    ++    P+PF
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPF
A0A7J9GNP8 Uncharacterized protein9.0e-0560.38Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPP----HRPAATPRVPI
        M +QRLE+C+EL+++AV FVVVVAE+VG VIHQ   PP     RP ATP VP+
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPP----HRPAATPRVPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCAGAGACTAGAACTCTGCTTGGAGTTGCTGAGAATGGCCGTCAATTTCGTCGTCGTCGTCGCCGAATCCGTCGGCGAGGTCATCCACCAGGAGTCCCAGCC
GCCGCACCGGCCTGCGGCTACTCCTAGGGTTCCGATTCCGTTCGCAATTTTGGACCACCCTGATATACAAGGAGCTGACGAGGATAACCGGGGAGAAATCGGGCTGAAAG
ATGGACCAATGAGGCAAAATCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCATGGGCCGAGGCCGAGGGCCG
AGTCCGTTCGATGCCGTTTGGTCCCCACCGCCTTTGGCCGCCTCGGTTTCGCCTGGTTTGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTCAGAGACTAGAACTCTGCTTGGAGTTGCTGAGAATGGCCGTCAATTTCGTCGTCGTCGTCGCCGAATCCGTCGGCGAGGTCATCCACCAGGAGTCCCAGCC
GCCGCACCGGCCTGCGGCTACTCCTAGGGTTCCGATTCCGTTCGCAATTTTGGACCACCCTGATATACAAGGAGCTGACGAGGATAACCGGGGAGAAATCGGGCTGAAAG
ATGGACCAATGAGGCAAAATCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCATGGGCCGAGGCCGAGGGCCG
AGTCCGTTCGATGCCGTTTGGTCCCCACCGCCTTTGGCCGCCTCGGTTTCGCCTGGTTTGACCTAA
Protein sequenceShow/hide protein sequence
MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPHRPAATPRVPIPFAILDHPDIQGADEDNRGEIGLKDGPMRQNRQVGRAKTEGVGFLARPPARPRPMGRGRGP
SPFDAVWSPPPLAASVSPGLT