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Lag0001729 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001729
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:34777674..34778683
RNA-Seq ExpressionLag0001729
SyntenyLag0001729
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5469007.1 hypothetical protein F2P56_013112 [Juglans regia]5.4e-0534Show/hide
Query:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF--PRYG-QKSVWSEASPGSNAAASPKVGLDSDATAAIGSPLN
        L+LG+   CW  + YE+L +FCY CG +    REC E +S+ ++     YG WLR  F  P+ G Q    + +  GS  A  P+      A      P+N
Subjt:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF--PRYG-QKSVWSEASPGSNAAASPKVGLDSDATAAIGSPLN

KAG0550818.1 hypothetical protein BDA96_01G370300 [Sorghum bicolor]3.2e-0542.25Show/hide
Query:  CWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFFPRY----GQKSVWSE-ASPGS
        CWCPI YE L NFCYGCG +  +++EC   +        + +GDWLR    R+     Q+  WSE  S GS
Subjt:  CWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFFPRY----GQKSVWSE-ASPGS

TXG48328.1 hypothetical protein EZV62_027622 [Acer yangbiense]4.1e-0531.69Show/hide
Query:  MCLVGKLLSSKQANPEALCSVMKSFWKLKKLTEYGKNVELALFYEFVFLRIFLLLFEDVFSLR-------LGNGEICWCPITYEKLLNFCYGCGRISQLK
        +CLVGK+L++K  N +A   ++   WK+K     G  +E ++  +  FLR+ + L  +  SLR       + +GE     + YE+L N C+ CGR+  L 
Subjt:  MCLVGKLLSSKQANPEALCSVMKSFWKLKKLTEYGKNVELALFYEFVFLRIFLLLFEDVFSLR-------LGNGEICWCPITYEKLLNFCYGCGRISQLK

Query:  RECLESLSLG-SDGKAD-SYGDWLRTFFPRYGQKSVWSEASP
         EC++ +  G ++G A+  +G W++   P Y  KS W    P
Subjt:  RECLESLSLG-SDGKAD-SYGDWLRTFFPRYGQKSVWSEASP

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.4e-0643.64Show/hide
Query:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLR
        L+  +G+  WCP+ YEKL +FCY CG+I    REC +   + +    + YGDWLR
Subjt:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLR

XP_035546641.1 uncharacterized protein LOC108984200 [Juglans regia]5.4e-0534Show/hide
Query:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF--PRYG-QKSVWSEASPGSNAAASPKVGLDSDATAAIGSPLN
        L+LG+   CW  + YE+L +FCY CG +    REC E +S+ ++     YG WLR  F  P+ G Q    + +  GS  A  P+      A      P+N
Subjt:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF--PRYG-QKSVWSEASPGSNAAASPKVGLDSDATAAIGSPLN

TrEMBL top hitse value%identityAlignment
A0A1Z5S941 CCHC-type domain-containing protein4.5e-0542.25Show/hide
Query:  CWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFFPRY----GQKSVWSE-ASPGS
        CWCPI YE L NFCYGCG +  +++EC     +  +     +GDWLR    R+     Q+  WSE  S GS
Subjt:  CWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFFPRY----GQKSVWSE-ASPGS

A0A2N9IIR5 Uncharacterized protein7.6e-0542.11Show/hide
Query:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADS--YGDWLR
        +RLG G++ W    +E+L NFCY CGR++   ++C + +  G  G  +S  YGDWLR
Subjt:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADS--YGDWLR

A0A6J1D765 uncharacterized protein LOC1110179023.1e-0643.64Show/hide
Query:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLR
        L+  +G+  WCP+ YEKL +FCY CG+I    REC +   + +    + YGDWLR
Subjt:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLR

A0A6J5VAT6 CCHC-type domain-containing protein5.8e-0528.76Show/hide
Query:  NLESSKSCRLQIPSDSPLLESGKAHMCLVGKLLSSKQANPEALCSVMKSFWKLKKLTEYG-KNVELALF-YEFVFLRIFLL-------LFEDVFSLRLGN
        +L + +   L I SD   + + + H+CLVG +L+ +  N EA    M   W    + E G K++   LF + F  +R   +           V  L+  +
Subjt:  NLESSKSCRLQIPSDSPLLESGKAHMCLVGKLLSSKQANPEALCSVMKSFWKLKKLTEYG-KNVELALF-YEFVFLRIFLL-------LFEDVFSLRLGN

Query:  GEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF
                 YE+LL+FCY CGRI  + +EC    ++  + K   YG WL + F
Subjt:  GEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF

A0A6P9EH14 uncharacterized protein LOC1089842002.6e-0534Show/hide
Query:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF--PRYG-QKSVWSEASPGSNAAASPKVGLDSDATAAIGSPLN
        L+LG+   CW  + YE+L +FCY CG +    REC E +S+ ++     YG WLR  F  P+ G Q    + +  GS  A  P+      A      P+N
Subjt:  LRLGNGEICWCPITYEKLLNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFF--PRYG-QKSVWSEASPGSNAAASPKVGLDSDATAAIGSPLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAACTTCCAAAAATCTAGAATCTTCTAAGTCCTGTCGTTTACAGATTCCCTCTGATAGCCCGCTTCTGGAATCTGGTAAAGCTCACATGTGCCTTGTTGGGAA
ATTGCTTTCCAGTAAGCAAGCAAATCCTGAGGCCCTTTGTTCTGTTATGAAATCGTTCTGGAAGTTGAAGAAGTTGACAGAATATGGGAAAAACGTGGAGTTGGCCCTAT
TTTACGAGTTCGTGTTTCTTCGGATCTTTTTGTTGCTATTCGAAGATGTATTTTCTCTTCGCTTGGGTAACGGTGAGATTTGCTGGTGCCCAATCACATATGAAAAGCTT
TTGAATTTTTGTTATGGTTGTGGTCGAATAAGTCAACTAAAGCGTGAATGTCTGGAATCCTTGAGTTTGGGTTCTGATGGTAAGGCTGATTCGTATGGTGACTGGCTTCG
TACGTTTTTTCCCCGATATGGTCAGAAATCTGTTTGGTCGGAGGCTTCCCCTGGTTCGAATGCGGCTGCCTCACCGAAAGTTGGTTTGGATTCTGATGCGACGGCAGCGA
TTGGTTCCCCGTTGAATGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAAACTTCCAAAAATCTAGAATCTTCTAAGTCCTGTCGTTTACAGATTCCCTCTGATAGCCCGCTTCTGGAATCTGGTAAAGCTCACATGTGCCTTGTTGGGAA
ATTGCTTTCCAGTAAGCAAGCAAATCCTGAGGCCCTTTGTTCTGTTATGAAATCGTTCTGGAAGTTGAAGAAGTTGACAGAATATGGGAAAAACGTGGAGTTGGCCCTAT
TTTACGAGTTCGTGTTTCTTCGGATCTTTTTGTTGCTATTCGAAGATGTATTTTCTCTTCGCTTGGGTAACGGTGAGATTTGCTGGTGCCCAATCACATATGAAAAGCTT
TTGAATTTTTGTTATGGTTGTGGTCGAATAAGTCAACTAAAGCGTGAATGTCTGGAATCCTTGAGTTTGGGTTCTGATGGTAAGGCTGATTCGTATGGTGACTGGCTTCG
TACGTTTTTTCCCCGATATGGTCAGAAATCTGTTTGGTCGGAGGCTTCCCCTGGTTCGAATGCGGCTGCCTCACCGAAAGTTGGTTTGGATTCTGATGCGACGGCAGCGA
TTGGTTCCCCGTTGAATGGGTAA
Protein sequenceShow/hide protein sequence
MEQTSKNLESSKSCRLQIPSDSPLLESGKAHMCLVGKLLSSKQANPEALCSVMKSFWKLKKLTEYGKNVELALFYEFVFLRIFLLLFEDVFSLRLGNGEICWCPITYEKL
LNFCYGCGRISQLKRECLESLSLGSDGKADSYGDWLRTFFPRYGQKSVWSEASPGSNAAASPKVGLDSDATAAIGSPLNG