; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001730 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001730
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:34778954..34780529
RNA-Seq ExpressionLag0001730
SyntenyLag0001730
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019175839.1 PREDICTED: uncharacterized protein LOC109171159 [Ipomoea nil]9.2e-1727.68Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGG----------------VCDL--IKITGIPFGSSGLRFTQYYKVDRLDFCKSDH
        GFYG      R + W L+R L G  ++PW++ GDFN  LY  EK GG                 C L  + ++G P+     + T  +  +RLD   +  
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGG----------------VCDL--IKITGIPFGSSGLRFTQYYKVDRLDFCKSDH

Query:  RPILLSCSSV------QGSLRGLG----------SLWGQSKVENYGAKI---HQENAQVQS-----AILKFENRERPFDLIQAEADFKACCWRKRFTRNN
            L C  V      +G  RGL           + WG  +   +G KI    +E  +++      ++ +F   +     I+ + D     WR+R  ++ 
Subjt:  RPILLSCSSV------QGSLRGLG----------SLWGQSKVENYGAKI---HQENAQVQS-----AILKFENRERPFDLIQAEADFKACCWRKRFTRNN

Query:  V-HTRALAKIGESSL---ELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKS
        +    A  K   S+    E     +QPR+    N+ L+RPF VEEI      IHP  +PGPDG++  FY++
Subjt:  V-HTRALAKIGESSL---ELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.6e-1526.3Show/hide
Query:  SSNSGVATADVSSFFLAK-AGFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKE-------------GGVCDLIKITGIPFGSS-----
        S +  +   D+S  F  +  GFYG   A  R+  W LLR +   D  PWL+GGD NA L+N E                 + D   +T + F        
Subjt:  SSNSGVATADVSSFFLAK-AGFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKE-------------GGVCDLIKITGIPFGSS-----

Query:  GLRFTQYYKVDRLD--FCKSDHRPILLSCS--------------SVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEA---
          RF       RLD   C      +    S              S+Q S   L   WG+S V +   +I  + A    AI+   N+  P D     A   
Subjt:  GLRFTQYYKVDRLD--FCKSDHRPILLSCS--------------SVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEA---

Query:  ------DFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH
              + +   W++R +R +     +A +    +E ++N +  R+ +++N+ LL P+T EEI +  RQ+ P  + GPDG    FY+++
Subjt:  ------DFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH

XP_024033492.1 uncharacterized protein LOC112095617 [Citrus clementina]1.6e-1326.69Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGG----------------VCDL--IKITGIPFGSSGLRFTQYY---KVDR-----
        G YG      +   WTL+R L G    PW+  GDFN  L  +EK  G                 C L  ++  G PF  S  RF  Y+   K++R     
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGG----------------VCDL--IKITGIPFGSSGLRFTQYY---KVDR-----

Query:  -------------LDFCKSDHRPILL-----------------------------SCSSVQGSLRGLGSLWGQSKVENYGAKI-HQENAQVQS-AILKFE
                     LD C SDH PI+L                              C  +     G    W +  +  Y  KI +   AQ+Q+ +  +F 
Subjt:  -------------LDFCKSDHRPILL-----------------------------SCSSVQGSLRGLGSLWGQSKVENYGAKI-HQENAQVQS-AILKFE

Query:  NRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH
        N +            K   W+K+     ++        ES LE  L+ + P +  +MN+ L  PFT EEI   F Q+ P  + GPDGL  AF++ H
Subjt:  NRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH

XP_024043257.1 uncharacterized protein LOC112099952 [Citrus clementina]5.6e-1428.47Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGG----------------VCDLIKI--TGIPFGSSGLRFTQYYKVDRLD------
        G YG   +  +   WTLLR L G  + PWL  GDFN  L  SEK GG                 C L+ +   G PF  S  R+  +   +RLD      
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGG----------------VCDLIKI--TGIPFGSSGLRFTQYYKVDRLD------

Query:  ----------------FCKSDHRPILLSCSSVQGSLRGLGSLWGQSKVENYGAKIHQENA----QVQSAILKFE----NRERPFDLIQAEADFKACCWRK
                        +C SDH P++L    +Q   R     W + K      + H E+     +   +I++ E       R  D + A   F+      
Subjt:  ----------------FCKSDHRPILLSCSSVQGSLRGLGSLWGQSKVENYGAKIHQENA----QVQSAILKFE----NRERPFDLIQAEADFKACCWRK

Query:  RFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH
               +  A +   E  +E  L  V+P+VD++MN  L  PFT EE+     Q+ P  +PGPDGL  AF++ H
Subjt:  RFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH

XP_042965968.1 uncharacterized protein LOC122299640 [Carya illinoinensis]2.5e-1429.79Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGVCDLIKITGIPFGSSGLRFTQ----YYKVDRLDFCKSDHRPILLSCSSVQGSL
        GFYG    E R   W LLR LR   + PWL  GDFN  L N EK G + DL        GS  L   +    + KV R + C S  +           SL
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGVCDLIKITGIPFGSSGLRFTQ----YYKVDRLDFCKSDHRPILLSCSSVQGSL

Query:  RGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRER-----PFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHL
        RG       S +EN    +     Q+Q+   +    +R       DLIQ           K F   + +    +    +  E  L  V   + + MNQ L
Subjt:  RGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRER-----PFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHL

Query:  LRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH
        ++  +VEE+      ++P  SPGPDG S  FY+ +
Subjt:  LRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH

TrEMBL top hitse value%identityAlignment
A0A2I4DF11 uncharacterized protein LOC1089794992.5e-1227.64Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGV----------------CDL--IKITGIPFGSSGLRFTQYYKVDRLD--FCKS
        GFYG+    +R   W LLR L+  + V WL  GDFN  L  +EK GG                 CDL  +   G  F  S  R    +  +RLD  FC  
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGV----------------CDL--IKITGIPFGSSGLRFTQYYKVDRLD--FCKS

Query:  DHRPILLSCSSVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQ
            I+L  S ++            +KV+    K      +V       ++R++      A        +++ FT  N            +++  L +  
Subjt:  DHRPILLSCSSVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQ

Query:  PRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH
        P V N+MNQ LLRP+   E+     Q+   +SPGPDG   AFY+ +
Subjt:  PRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH

A0A5B6X7R9 Reverse transcriptase2.5e-1226.83Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGV----------------CDLIKITGIPFGSSGLRFTQYYKVDRLDFCKSDHRP
        GFYG  +  ++ND W LLR L      PWLV GDFN  LY+SEK GG+                C L  I     G SG  FT     +R +F +++ R 
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGV----------------CDLIKITGIPFGSSGLRFTQYYKVDRLDFCKSDHRP

Query:  IL---LSCSSVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAIL-KFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQ
         L   ++    +   +   + W  +  E+  A+I      +  +IL K EN +      +          +K+ T+       L   G      +L  ++
Subjt:  IL---LSCSSVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAIL-KFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQ

Query:  PRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH
         R+ + +N  LL  FT E ++   +++ P  +PGPDG    F++ +
Subjt:  PRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH

A0A6J1DUG8 uncharacterized protein LOC1110241353.9e-1329.41Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGVC-DLIKITGIP---------FGSSGLRFTQYYKVDRLDFCKSDHRPILLSCS
        GFYG+     R+  W LL  L    D+PW++GGDFN  +  +EK GGVC +  ++ G P            S L      KV  L+   SDHRPIL S  
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGVC-DLIKITGIP---------FGSSGLRFTQYYKVDRLDFCKSDHRPILLSCS

Query:  SVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQ----SAILKFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQ
                L   W   K      KI  E + +Q      I+       P   I+A       C  +    N +      K   +  E  L  ++    + 
Subjt:  SVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQ----SAILKFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQ

Query:  MNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYK
         N  L + FT EEI V  + +HP   PGPDG+   F++
Subjt:  MNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYK

A0A6J1DX30 uncharacterized protein LOC1110248743.2e-1526.3Show/hide
Query:  SSNSGVATADVSSFFLAK-AGFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKE-------------GGVCDLIKITGIPFGSS-----
        S +  +   D+S  F  +  GFYG   A  R+  W LLR +   D  PWL+GGD NA L+N E                 + D   +T + F        
Subjt:  SSNSGVATADVSSFFLAK-AGFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKE-------------GGVCDLIKITGIPFGSS-----

Query:  GLRFTQYYKVDRLD--FCKSDHRPILLSCS--------------SVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEA---
          RF       RLD   C      +    S              S+Q S   L   WG+S V +   +I  + A    AI+   N+  P D     A   
Subjt:  GLRFTQYYKVDRLD--FCKSDHRPILLSCS--------------SVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEA---

Query:  ------DFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH
              + +   W++R +R +     +A +    +E ++N +  R+ +++N+ LL P+T EEI +  RQ+ P  + GPDG    FY+++
Subjt:  ------DFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH

A0A803PJG3 Uncharacterized protein1.8e-1326.2Show/hide
Query:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGVCDLIKITGIPFGSSGLRFTQYYKVDRLDFCKSDHRPILLSCSSVQGSLRGLG
        G YG    E R   W LLR L+   ++PW + GD N      EK+GGV   +      F ++ LR  +      +D C           +++QG ++  G
Subjt:  GFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGVCDLIKITGIPFGSSGLRFTQYYKVDRLDFCKSDHRPILLSCSSVQGSLRGLG

Query:  SL---WGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTV
         +   WG+    ++ A   + N  +       +N  R  +            ++  F  +N+            L  VL+ V P V  + N  LL P   
Subjt:  SL---WGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEADFKACCWRKRFTRNNVHTRALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTV

Query:  EEILVVFRQIHPKNSPGPDGLSGAFYKSH
        +E+     Q+HP  SPGPDG++ AFY+ H
Subjt:  EEILVVFRQIHPKNSPGPDGLSGAFYKSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCGCTAATCAGGATTTACAGGAGCTTGGGCAGTTGGGAAAACGAGATTCTTCTGCCATTGATTCTACCTTCATTTCTTCGTCGTCCAAGTGTGCTAAAGGGGC
CATTATTTCTTCGAATTCTGGTGTTGCTACGGCTGATGTTTCTTCTTTCTTTTTGGCAAAGGCTGGATTCTATGGTAGTTCATTCGCAGAGTCACGTAATGACATTTGGA
CTCTCCTTCGACACCTGAGGGGTAGCGACGATGTGCCTTGGCTGGTTGGGGGAGACTTCAATGCTTTTCTATATAATTCGGAGAAAGAAGGGGGCGTTTGCGACCTCATC
AAAATTACAGGAATTCCATTTGGTTCTAGTGGCCTTCGATTCACACAGTATTATAAAGTGGATCGCCTGGATTTTTGTAAATCTGACCATAGGCCAATTCTCCTGAGTTG
TAGTTCTGTTCAGGGTTCCCTCAGGGGTTTGGGATCACTGTGGGGTCAGTCAAAGGTTGAGAATTATGGTGCAAAAATCCACCAGGAAAATGCTCAGGTCCAATCAGCTA
TATTGAAATTTGAGAATCGTGAGCGTCCGTTTGACTTAATACAGGCTGAGGCTGATTTTAAGGCTTGTTGTTGGAGGAAGAGATTTACTAGAAACAACGTTCACACAAGA
GCATTGGCTAAAATAGGTGAATCTTCCTTGGAGTTGGTCTTAAATTCAGTGCAGCCTAGAGTGGATAATCAAATGAATCAGCATCTCTTGCGACCTTTTACAGTTGAGGA
AATCTTAGTGGTTTTTCGTCAAATTCATCCAAAAAACTCGCCCGGGCCAGACGGTTTATCTGGGGCGTTTTACAAGAGCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATCGCTAATCAGGATTTACAGGAGCTTGGGCAGTTGGGAAAACGAGATTCTTCTGCCATTGATTCTACCTTCATTTCTTCGTCGTCCAAGTGTGCTAAAGGGGC
CATTATTTCTTCGAATTCTGGTGTTGCTACGGCTGATGTTTCTTCTTTCTTTTTGGCAAAGGCTGGATTCTATGGTAGTTCATTCGCAGAGTCACGTAATGACATTTGGA
CTCTCCTTCGACACCTGAGGGGTAGCGACGATGTGCCTTGGCTGGTTGGGGGAGACTTCAATGCTTTTCTATATAATTCGGAGAAAGAAGGGGGCGTTTGCGACCTCATC
AAAATTACAGGAATTCCATTTGGTTCTAGTGGCCTTCGATTCACACAGTATTATAAAGTGGATCGCCTGGATTTTTGTAAATCTGACCATAGGCCAATTCTCCTGAGTTG
TAGTTCTGTTCAGGGTTCCCTCAGGGGTTTGGGATCACTGTGGGGTCAGTCAAAGGTTGAGAATTATGGTGCAAAAATCCACCAGGAAAATGCTCAGGTCCAATCAGCTA
TATTGAAATTTGAGAATCGTGAGCGTCCGTTTGACTTAATACAGGCTGAGGCTGATTTTAAGGCTTGTTGTTGGAGGAAGAGATTTACTAGAAACAACGTTCACACAAGA
GCATTGGCTAAAATAGGTGAATCTTCCTTGGAGTTGGTCTTAAATTCAGTGCAGCCTAGAGTGGATAATCAAATGAATCAGCATCTCTTGCGACCTTTTACAGTTGAGGA
AATCTTAGTGGTTTTTCGTCAAATTCATCCAAAAAACTCGCCCGGGCCAGACGGTTTATCTGGGGCGTTTTACAAGAGCCATTAG
Protein sequenceShow/hide protein sequence
MDIANQDLQELGQLGKRDSSAIDSTFISSSSKCAKGAIISSNSGVATADVSSFFLAKAGFYGSSFAESRNDIWTLLRHLRGSDDVPWLVGGDFNAFLYNSEKEGGVCDLI
KITGIPFGSSGLRFTQYYKVDRLDFCKSDHRPILLSCSSVQGSLRGLGSLWGQSKVENYGAKIHQENAQVQSAILKFENRERPFDLIQAEADFKACCWRKRFTRNNVHTR
ALAKIGESSLELVLNSVQPRVDNQMNQHLLRPFTVEEILVVFRQIHPKNSPGPDGLSGAFYKSH