; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001759 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001759
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationchr4:35121694..35125972
RNA-Seq ExpressionLag0001759
SyntenyLag0001759
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022450.1 hypothetical protein SDJN02_16181, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-9775.71Show/hide
Query:  MGDHL------PSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSK
        MGDHL      PSS+SPPV DRQPPS +SASDLT LNS+SYSSS T+D FKD P+HRCL+LDAVQTHWTDEKHRSYL SLEASFVQELHQYR L ALSSK
Subjt:  MGDHL------PSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSK

Query:  QKLHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPP
        QK+  +P M +ISSSELMVLQD+SWQKANIGRNDPLL+R ADSPAIL+ VWIN FPSAGK CT ++PDLLE  G+ SD RHLRNT NS  SARSSQQIPP
Subjt:  QKLHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPP

Query:  CCRDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        CCR+SY +ITEVSDQNFVDN PGE+S GM  AKRLKK +SDS +++Q
Subjt:  CCRDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]4.2e-9573.55Show/hide
Query:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR
        H PSS+SPPVADR+ P + SASDLTRLNSESYSSS T+D  +     +P+H C +LDAVQTHWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQK+ R
Subjt:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR

Query:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS
        KPIM NISSSE MVLQD+SWQKAN+GR DPLLD+TADSPAILE VWINHFPSAG QCTL++ D+LE  G+CSDR H+RN TNS  SARSSQQIPPCCRDS
Subjt:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS

Query:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        + ++TEVSDQNFVD HPGELSDG  I KRLKK +SDS  +N+
Subjt:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]4.2e-9573.55Show/hide
Query:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR
        H PSS+SPPVADR+ P + SASDLTRLNSESYSSS T+D  +     +P+H C +LDAVQTHWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQK+ R
Subjt:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR

Query:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS
        KPIM NISSSE MVLQD+SWQKAN+GR DPLLD+TADSPAILE VWINHFPSAG QCTL++ D+LE  G+CSDR H+RN TNS  SARSSQQIPPCCRDS
Subjt:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS

Query:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        + ++TEVSDQNFVD HPGELSDG  I KRLKK +SDS  +N+
Subjt:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

XP_023529516.1 uncharacterized protein LOC111792349 isoform X1 [Cucurbita pepo subsp. pepo]1.8e-9876.11Show/hide
Query:  MGDHL------PSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSK
        MGDHL      PSS+SPPV DRQPPS +SASDLT LNS+SYSSS+T+D FKD P+HRCL+LDAVQTHWTDEKHRSYL SLEASFVQELHQYR L ALSSK
Subjt:  MGDHL------PSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSK

Query:  QKLHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPP
        QK+  +P M +ISSSELMVLQD+SWQKANIGRNDPLL+R AD PAIL+ VWIN FPSAGKQCT ++PDLLE  G+ SDRRHLRNT NS  SARSSQQ+PP
Subjt:  QKLHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPP

Query:  CCRDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        CCR+SY +ITEVSDQNFVDNHPGE+S GM  AKRLKK +SDS +++Q
Subjt:  CCRDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

XP_023553838.1 uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo]6.8e-9372.73Show/hide
Query:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR
        H PSS+SPPVADR+ P + SASDLTRLNSESYSSS T+D  +     +P+H C +LDAVQTHWTDEKHR +LDSLEASFVQ+LH+YRHL A SSKQK+ R
Subjt:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR

Query:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS
        K IM NISSSE +VLQD+SWQKANIGR DPLL +TADSPAILE VWINHFPSAGK CTL++ D+LE  G+CSDRRH+RN TNSC SARSSQQIP CCRDS
Subjt:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS

Query:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        + + TEVSDQNFVD HPGELSDG  I KRLKK +SDS  +++
Subjt:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

TrEMBL top hitse value%identityAlignment
A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X11.4e-9173.47Show/hide
Query:  MGD-HLPSSVSPPVADRQP--PSAASASDLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQK
        MGD H PS VS P+ADRQ   P A+S +D T  NSES+SSSIT+DG K  L +H CL+LDA QTHWTDEKHRSYLDSLEASFVQ LHQ+R +HALSSKQK
Subjt:  MGD-HLPSSVSPPVADRQP--PSAASASDLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQK

Query:  LHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCC
        + RKPIM + SSSELMVLQD+SWQKANIGRNDPLLD+TADSPAILE +WINHFPSAGKQC+L++PDLLE  G+CSDRRH+R+ TNSCGSAR+SQQ  PCC
Subjt:  LHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCC

Query:  RDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
         +SY +ITEVSDQNFVDN PGELS GM  AKRLKK +S  L + Q
Subjt:  RDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

A0A5D3C4A3 Cold regulated protein 27, putative isoform 22.8e-9273.58Show/hide
Query:  MGD-HLPSSVSPPVADRQP--PSAASASDLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQK
        MGD H PS VS P+ADRQ   P A+S +D T  NSES+SSSIT+DG K  L +H CL+LDA QTHWTDEKHRSYLDSLEASFVQ LHQ+R +HALSSKQK
Subjt:  MGD-HLPSSVSPPVADRQP--PSAASASDLTRLNSESYSSSITLDGFKD-LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQK

Query:  LHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCC
        + RKPIM + SSSELMVLQD+SWQKANIGRNDPLLD+TADSPAILE +WINHFPSAGKQC+L++PDLLE  G+CSDRRH+R+ TNSCGSAR+SQQ  PCC
Subjt:  LHRKPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCC

Query:  RDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQG
         +SY +ITEVSDQNFVDN PGELS GM  AKRLKK +S  L + QG
Subjt:  RDSYAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQG

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X22.1e-9573.55Show/hide
Query:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR
        H PSS+SPPVADR+ P + SASDLTRLNSESYSSS T+D  +     +P+H C +LDAVQTHWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQK+ R
Subjt:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR

Query:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS
        KPIM NISSSE MVLQD+SWQKAN+GR DPLLD+TADSPAILE VWINHFPSAG QCTL++ D+LE  G+CSDR H+RN TNS  SARSSQQIPPCCRDS
Subjt:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS

Query:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        + ++TEVSDQNFVD HPGELSDG  I KRLKK +SDS  +N+
Subjt:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X12.1e-9573.55Show/hide
Query:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR
        H PSS+SPPVADR+ P + SASDLTRLNSESYSSS T+D  +     +P+H C +LDAVQTHWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQK+ R
Subjt:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR

Query:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS
        KPIM NISSSE MVLQD+SWQKAN+GR DPLLD+TADSPAILE VWINHFPSAG QCTL++ D+LE  G+CSDR H+RN TNS  SARSSQQIPPCCRDS
Subjt:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS

Query:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        + ++TEVSDQNFVD HPGELSDG  I KRLKK +SDS  +N+
Subjt:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X22.4e-9171.49Show/hide
Query:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR
        H PSS+SPPVADR+   + SASDLTRLNSESYSSS T+D  +     +P+H C +LDAVQTHWTDEKHR +LD+LEASFVQ+LH+YRHL A SSKQK+ R
Subjt:  HLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR

Query:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS
        KPIM NISSSE MVLQD+SWQKANIGR DPLL +TADSPAILE VWINHFPSAG Q T ++ D+LE  G+CSDR H+RN TNSC SARSSQQIPPCCRDS
Subjt:  KPIMHNISSSELMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLE--GTCSDRRHLRNTTNSCGSARSSQQIPPCCRDS

Query:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ
        + ++ EVSDQNFVD HPGELS G  I KRLKK +SDSL +++
Subjt:  YAVITEVSDQNFVDNHPGELSDGMFIAKRLKKTTSDSLSDNQ

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 271.3e-0932.34Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN

Query:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVD
        H+    K   +   D  E       + +    S GSA S +Q+    RD   +     EVSDQNFV+
Subjt:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVD

Q8L983 Cold-regulated protein 283.2e-0531.2Show/hide
Query:  DRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR-KPIMHNI--SSSEL
        DR    A++ S      S S  S +T +  +     +  E     T WT+EKH SYLD LE+SFV++L+           Q+L R + +  N   S+ + 
Subjt:  DRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR-KPIMHNI--SSSEL

Query:  MVLQDSSWQKANIGRNDPLLDRTAD
         VLQ+  WQK N G+    L+ +++
Subjt:  MVLQDSSWQKANIGRNDPLLDRTAD

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)2.3e-0631.2Show/hide
Query:  DRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR-KPIMHNI--SSSEL
        DR    A++ S      S S  S +T +  +     +  E     T WT+EKH SYLD LE+SFV++L+           Q+L R + +  N   S+ + 
Subjt:  DRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR-KPIMHNI--SSSEL

Query:  MVLQDSSWQKANIGRNDPLLDRTAD
         VLQ+  WQK N G+    L+ +++
Subjt:  MVLQDSSWQKANIGRNDPLLDRTAD

AT4G33980.2 FUNCTIONS IN: molecular_function unknown2.3e-0631.2Show/hide
Query:  DRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR-KPIMHNI--SSSEL
        DR    A++ S      S S  S +T +  +     +  E     T WT+EKH SYLD LE+SFV++L+           Q+L R + +  N   S+ + 
Subjt:  DRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHR-KPIMHNI--SSSEL

Query:  MVLQDSSWQKANIGRNDPLLDRTAD
         VLQ+  WQK N G+    L+ +++
Subjt:  MVLQDSSWQKANIGRNDPLLDRTAD

AT5G42900.1 cold regulated gene 279.0e-1132.34Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN

Query:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVD
        H+    K   +   D  E       + +    S GSA S +Q+    RD   +     EVSDQNFV+
Subjt:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVD

AT5G42900.2 cold regulated gene 279.0e-1132.34Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN

Query:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVD
        H+    K   +   D  E       + +    S GSA S +Q+    RD   +     EVSDQNFV+
Subjt:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVD

AT5G42900.3 cold regulated gene 273.1e-1133.13Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLH--------RKPIMHNISSSELMVLQDSSWQKANIGRNDPLLD--RTADSPAILEGVWIN

Query:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCR--DSYAVITEVSDQNFVD
        H+    K   +   D  E       + +    S GSA S +Q+    R  D  +V  EVSDQNFV+
Subjt:  HFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCR--DSYAVITEVSDQNFVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACCATCTGCCGTCGTCCGTATCGCCGCCGGTTGCTGATCGACAACCACCCTCCGCTGCCTCTGCTAGCGACTTGACTCGCTTGAACTCCGAATCCTACTCTTC
TTCCATTACTCTTGATGGGTTCAAGGATTTGCCTGCTCATCGTTGTCTGGAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTT
TAGAGGCATCTTTTGTCCAAGAGTTGCATCAATATAGACACTTGCATGCTTTGTCCTCGAAACAGAAATTGCATCGGAAGCCGATCATGCATAATATATCTTCTTCAGAG
TTGATGGTCCTTCAAGATTCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAGGACTGCCGATTCTCCTGCTATTTTAGAGGGTGTATGGATAAA
TCATTTTCCTTCTGCAGGAAAACAGTGTACTCTGGATTCTCCTGATCTCCTTGAAGGAACTTGTAGTGATAGGAGACACTTAAGAAACACGACAAACTCCTGTGGATCTG
CCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGTGATTCTTATGCAGTCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCATCCAGGAGAGTTGTCTGATGGC
ATGTTTATTGCAAAAAGACTAAAGAAAACTACTTCTGATTCTTTGAGCGACAACCAGGGTGAAGTGCTCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACCATCTGCCGTCGTCCGTATCGCCGCCGGTTGCTGATCGACAACCACCCTCCGCTGCCTCTGCTAGCGACTTGACTCGCTTGAACTCCGAATCCTACTCTTC
TTCCATTACTCTTGATGGGTTCAAGGATTTGCCTGCTCATCGTTGTCTGGAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTT
TAGAGGCATCTTTTGTCCAAGAGTTGCATCAATATAGACACTTGCATGCTTTGTCCTCGAAACAGAAATTGCATCGGAAGCCGATCATGCATAATATATCTTCTTCAGAG
TTGATGGTCCTTCAAGATTCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAGGACTGCCGATTCTCCTGCTATTTTAGAGGGTGTATGGATAAA
TCATTTTCCTTCTGCAGGAAAACAGTGTACTCTGGATTCTCCTGATCTCCTTGAAGGAACTTGTAGTGATAGGAGACACTTAAGAAACACGACAAACTCCTGTGGATCTG
CCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGTGATTCTTATGCAGTCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCATCCAGGAGAGTTGTCTGATGGC
ATGTTTATTGCAAAAAGACTAAAGAAAACTACTTCTGATTCTTTGAGCGACAACCAGGGTGAAGTGCTCAACTAA
Protein sequenceShow/hide protein sequence
MGDHLPSSVSPPVADRQPPSAASASDLTRLNSESYSSSITLDGFKDLPAHRCLELDAVQTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKLHRKPIMHNISSSE
LMVLQDSSWQKANIGRNDPLLDRTADSPAILEGVWINHFPSAGKQCTLDSPDLLEGTCSDRRHLRNTTNSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHPGELSDG
MFIAKRLKKTTSDSLSDNQGEVLN