; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001766 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001766
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:35186366..35187637
RNA-Seq ExpressionLag0001766
SyntenyLag0001766
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4308602.1 unnamed protein product [Prunus armeniaca]4.5e-4431.55Show/hide
Query:  SVCSRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPL-GDFCVLDQLVWNYEKSGIFSVKSCYRLALQ--------SVLVRAPSSSDTGSL
        ++ S P+LP++S+VCDLF+ASG WDV K+   F+  +  +IL IPL GD   LD+ +WN+ K+G +SVKS Y  AL+        +  V  PSSS   SL
Subjt:  SVCSRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPL-GDFCVLDQLVWNYEKSGIFSVKSCYRLALQ--------SVLVRAPSSSDTGSL

Query:  QSWWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSIS
        +S W  LW L +P K+   +WR+  D LP++  L  R +    +C  C    E +LH    C      W+   F S F L +++   D+        SI 
Subjt:  QSWWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSIS

Query:  EFEEVVVF---LWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAG
          ++  +F   +W +WN RN +++     P    +   A DY   F+  +AA           S SS     +W PP+G+  KLN D +    +G  GAG
Subjt:  EFEEVVVF---LWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAG

Query:  CVLRDATGRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVA
         ++RD+ G+++ A + R P   SV   E +A+   +  A         IESDS +A+ +++ +   ++  G L+  VR L          H  R  N+ A
Subjt:  CVLRDATGRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVA

Query:  HALAQMSLVSSVAQVWVDFCPPCISSVVFKD
        H +A+ SL      +W+D  P  +   V+ D
Subjt:  HALAQMSLVSSVAQVWVDFCPPCISSVVFKD

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]1.8e-4530.28Show/hide
Query:  VCSRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLA-LQSVLVRAPSSSDTGSLQSWWTFLWS
        + S P LPLS+ VCDLF++SG+W+VP +   F   +  + L+IPL      D L+W+YE++G++SVKS YRLA L+   +    S        +W  +W+
Subjt:  VCSRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLA-LQSVLVRAPSSSDTGSLQSWWTFLWS

Query:  LCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFL
        L +P+K+K F+WR   D LP    L  R +    +C  C+R  E  LH  W C++ +  W+ S +G+V E   V+   +L    Q+  S  E        
Subjt:  LCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFL

Query:  WAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLS-----ASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDAT
        W +WN RN+ +++  S+         A+  +   R+   A+  S +  LS       SS  +    W PP   + K+N D +  S     G G V+R+A 
Subjt:  WAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLS-----ASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDAT

Query:  GRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMS
        G  + A   R+   +     E  A +E ++ A   GF   ++E D+   I  +          GLL+  V +L H+        T R+GN+VAH LAQ +
Subjt:  GRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMS

Query:  LVSSVAQVWVDFCPPCISSVVFKDVL
           +    W++  P  +  V+  DVL
Subjt:  LVSSVAQVWVDFCPPCISSVVFKDVL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.0e-5632.52Show/hide
Query:  MSVCSRPSLPLSSKVCDLFS-ASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLA-LQSVLVRAPSSSDTGSLQSWWTF
        + + S P LPL S+V  L     G W    +   F  D+   IL IP+G     D+L+WNYEK+G++SV+S Y++A L +  V+APSSS +  ++ WW  
Subjt:  MSVCSRPSLPLSSKVCDLFS-ASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLA-LQSVLVRAPSSSDTGSLQSWWTF

Query:  LWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVV
         W + +P+K+KVF+WRLC DRLPT  NL  RGVE    C  C R  EDS+H+FW CK     W  S FG +         F +L      LS ++FEE+ 
Subjt:  LWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVV

Query:  VFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR
        V +W +WN RN   +   +    + IG    ++   + +     +++   G   +++ +     W PP   + K+NTDASF++    AG G ++ +  G+
Subjt:  VFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR

Query:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV
        V+ AA+  L +  SVD+AE  A +E ++LA   G                +H    D+SE G ++   ++ +        +   R GN+ AH LA+ +L+
Subjt:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV

Query:  SSVAQVWVDFCP
             +W++  P
Subjt:  SSVAQVWVDFCP

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]7.0e-4531.8Show/hide
Query:  SRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCL
        S PS+   + V +L     +W    I  HF  +D  +I++IPL      DQL+W+Y+K G +SVKS Y++A++      PS S+    Q+ W F+W L +
Subjt:  SRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCL

Query:  PSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSV-SCMFDLLCLFQVRLSIS-EFEEVVVFLW
        P K+K+F+WR  HD LPT  NL  + V    +C  C+   E   H    C   R  W+ S+     EL  V  C    +  F  R     E  EV   LW
Subjt:  PSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSV-SCMFDLLCLFQVRLSIS-EFEEVVVFLW

Query:  AIWNYRNNLVWK-RPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLL
        AIW  RN  +++ +  +P    + A A   ++SF+ +   +   K+ G      +     +W PP     K+N DA+    +  AG G V+RD+ G    
Subjt:  AIWNYRNNLVWK-RPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLL

Query:  AA--SFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVS
        AA  S RLP   SV +AE  A+   +K+A        I ESDS   I L++   + ++E+G L+S ++    +     A H+ R  N  AH+LA+++L  
Subjt:  AA--SFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVS

Query:  SVAQVWVDFCPP
            +W+D  PP
Subjt:  SVAQVWVDFCPP

XP_030941688.1 uncharacterized protein LOC115966628 [Quercus lobata]2.0e-4431.25Show/hide
Query:  KVCDLFSASGR-WDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTG-SLQSWWTFLWSLCLPSKLKVF
        +V DL   + R WD   + + F+ DD  +I +IPL    V D L+W + K G +SV+S Y LA Q +     +   +G S +  W  LW L +P+K+KV+
Subjt:  KVCDLFSASGR-WDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTG-SLQSWWTFLWSLCLPSKLKVF

Query:  MWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMF-DLLCLFQV---RLSISEFEEVVVFLWAIWNY
         WR C D LPTR NL  R +     C +C    E  +H  W C   +  W     GS+  L   +  + D+L LF     RLS  EFE  +   W IWN 
Subjt:  MWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMF-DLLCLFQV---RLSISEFEEVVVFLWAIWNY

Query:  RNNLV-WKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFR
        RN ++   +  DP    +   A  Y+  +R      +A     + +   SV   ++W PP     KLN DA+  +  G +G G ++R+  G V+ A S +
Subjt:  RNNLV-WKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFR

Query:  LPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVSSVAQVWV
         P  W+ + AE  A   +V+ A   GF   +IE D+   ++ +  +  D S +G +   ++ L H   +   S   R  N VAH+LA+ +   S   +W+
Subjt:  LPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVSSVAQVWV

Query:  DFCPPCISSVVFKDVL
        + CPP  S  +++D+L
Subjt:  DFCPPCISSVVFKDVL

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189545.0e-5732.52Show/hide
Query:  MSVCSRPSLPLSSKVCDLFS-ASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLA-LQSVLVRAPSSSDTGSLQSWWTF
        + + S P LPL S+V  L     G W    +   F  D+   IL IP+G     D+L+WNYEK+G++SV+S Y++A L +  V+APSSS +  ++ WW  
Subjt:  MSVCSRPSLPLSSKVCDLFS-ASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLA-LQSVLVRAPSSSDTGSLQSWWTF

Query:  LWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVV
         W + +P+K+KVF+WRLC DRLPT  NL  RGVE    C  C R  EDS+H+FW CK     W  S FG +         F +L      LS ++FEE+ 
Subjt:  LWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVV

Query:  VFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR
        V +W +WN RN   +   +    + IG    ++   + +     +++   G   +++ +     W PP   + K+NTDASF++    AG G ++ +  G+
Subjt:  VFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR

Query:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV
        V+ AA+  L +  SVD+AE  A +E ++LA   G                +H    D+SE G ++   ++ +        +   R GN+ AH LA+ +L+
Subjt:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV

Query:  SSVAQVWVDFCP
             +W++  P
Subjt:  SSVAQVWVDFCP

A0A803PR93 Uncharacterized protein2.8e-4728.67Show/hide
Query:  RPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLP
        +P L   +K+ +L ++ G+W + K+  HF+ +D   +  IP+ D  V D L W Y  +G + VKS YR+  + + +    SS+   +  WW  LWS+ LP
Subjt:  RPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLP

Query:  SKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFW-------QCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVV
         ++K+F WR+CH+ LP ++NL  RG++    C LC    E   H  W C  V+  W       +C+HF +         MFD++   +  L  SEFEE +
Subjt:  SKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFW-------QCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVV

Query:  VFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAA---KRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDA
          +WAIW  RN    K P             + IQ    ++ A    R +K   ++       +  +W+ P    + +N DA+  + +   G G + RD 
Subjt:  VFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAA---KRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDA

Query:  TGRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQM
         G +LLA       C SV++AE WA+LE++K         F I+SD  + +  +    N +S V  ++  ++   +  +     H  R  NE AH LA+ 
Subjt:  TGRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQM

Query:  SLVSSVAQVWVDFCP
         L +    ++    P
Subjt:  SLVSSVAQVWVDFCP

A0A803QEG9 Uncharacterized protein1.6e-4731.52Show/hide
Query:  PLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLPSKLK
        P +  V +L +   +W++P +  +F   D   IL +PL  F   D+L+W++  SG F+V+S Y LA  S+     SSS T ++Q WW   WSL +P K+K
Subjt:  PLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLPSKLK

Query:  VFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFLWAIWNYRN
        +F WR+ HD LP   +L+ R +     C +C +  E + H  + CK  +  W+  HF   +         D L       + +E EE+   +WAIW  RN
Subjt:  VFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFLWAIWNYRN

Query:  NLVWKRPSDPFHRDIGAFASDYIQSFR-------LVAAAKRASKSAGLSASSS----SVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR
         +V  + +   + D+  FA+ ++Q+FR         A A  A+  AG S   S    + +  S W PP+    KLNTDA+  + S   G G VLRDA+G 
Subjt:  NLVWKRPSDPFHRDIGAFASDYIQSFR-------LVAAAKRASKSAGLSASSS----SVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR

Query:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV
        V  A +  +   +     E  A+  S+  A         IE+D+   +  L    N  SE   L+S V  L         SH  R  N  AH LA+ +L 
Subjt:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV

Query:  SSVAQVWVDFCPPCISSVVFKD
           A  W++F PP I SV+  +
Subjt:  SSVAQVWVDFCPPCISSVVFKD

A0A803QJ22 Uncharacterized protein1.6e-4730.79Show/hide
Query:  KVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLPSKLKVFMW
        KV DL     +W+   ++T F   D A I  IPL      D ++W++E +G++SVKS Y LA +  L      S     Q WW   W L LPSK+++F+W
Subjt:  KVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLPSKLKVFMW

Query:  RLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFLWAIWNYRNNLVW
        R  HD LP    L  R +     C LCNR  E   H  + CK  +  WQCS F     L     + +L        S    E+    LW+IW  RN    
Subjt:  RLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFLWAIWNYRNNLVW

Query:  KRPSDPFHRDIGA-FASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFRLPDCWS
        +  S P   D+   FA  YI  +  V   + A+ SA  +  +++V+  S WL P    LKLNTDA+  ++  ++G G VLRD +G+++ A S     C++
Subjt:  KRPSDPFHRDIGA-FASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFRLPDCWS

Query:  VDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVSSVAQVWVDFCPPC
         ++ E  A++ +++  +        IE+DS   ++ LH     +S+   L+ ++  L  +      +H  R+ N  AH LA+ +L       W +  PP 
Subjt:  VDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVSSVAQVWVDFCPPC

Query:  ISSVVF
        +  +VF
Subjt:  ISSVVF

A0A803QQT2 Uncharacterized protein3.5e-5031.75Show/hide
Query:  VCSRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSL
        V  +PSLP +  V DL  A G+WD   I + FN  D   IL IP  D+   D+++W+Y K G +SVKS YR+A  +        S+  S+  WW  LW L
Subjt:  VCSRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSL

Query:  CLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSL-HIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFL
         +P K+K F+W++ H+ LP  VNL  RG+    +C  C+   ++S+ H  W CK+ +G+W+ S  G   +L  +    +L  L ++     + E++  FL
Subjt:  CLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSL-HIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFL

Query:  ---WAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR
           W IWN RN +V      P   ++  +  +++  FR     +R+ +S          S  SRW+PP+   + +N DA        +G G V+RDA G 
Subjt:  ---WAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGR

Query:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV
        VL AA+  L         E  A+ + +++       RF +E+D  +A+ L+    N   ++  L++ +R L   + F G S   R  N VAHALA  +LV
Subjt:  VLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLV

Query:  SSVAQVWVDFCPPCISSVVFKD
           + +W+   PPC    V  D
Subjt:  SSVAQVWVDFCPPCISSVVFKD

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.6e-1522.82Show/hide
Query:  DLFSASGRWDVPKISTHFNADDCASILKIPLGDFC-VLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLPSKLKVFMWRL
        DL+     WD  KI  +   +    +  + L       D+L W + + G FSV+S Y +     + R        ++ S++  LW + +P ++K F+W +
Subjt:  DLFSASGRWDVPKISTHFNADDCASILKIPLGDFC-VLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLPSKLKVFMWRL

Query:  CHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFW-----QCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFLWAIWNYRNN
         +  + T      R +    +C +C    E  LH+   C +  G W     Q    G  F       ++D L        I       V +W  W +R  
Subjt:  CHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFW-----QCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFLWAIWNYRNN

Query:  LVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFRLPDC
         ++   +    RD   F  ++      V   +  S +  +  +   V     W+ P    +K+NTD +     G A AG VLRD TG      S  +  C
Subjt:  LVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFRLPDC

Query:  WSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVSSVAQVWVDFCP
         S   AE W V   +  A      R  +E DS   +  L    +D   +  L+         +      H  R  N +A  LA  +   S+     D  P
Subjt:  WSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVSSVAQVWVDFCP

Query:  PCISSVVFKDVL
          +SS++ +D L
Subjt:  PCISSVVFKDVL

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.7e-0424.8Show/hide
Query:  WWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQ--------
        W+  +W      K     W +  +RL TR  L   G+  P +C+LCN  +E   H+F+ C      W+    G          M+ L+ L          
Subjt:  WWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQ--------

Query:  --VRLSISEFEEVVVFLWAIWNYRN
          +RL+         +++AIW  RN
Subjt:  --VRLSISEFEEVVVFLWAIWNYRN

AT3G09510.1 Ribonuclease H-like superfamily protein1.0e-2224.19Show/hide
Query:  VCSRPSLPLSSK-------VCDLFSASGR---WDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSL
        V S P  PL+++       + +LF   G    WD  KIS   +  D   I +I L      D+++WNY  +G ++V+S Y L         P+ +     
Subjt:  VCSRPSLPLSSK-------VCDLFSASGR---WDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSL

Query:  QSWWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFD----LLCLFQVR
            T +W+L +  KLK F+WR     L T   L  RG+     C  C+R  E   H  + C      W+ S   S+     +S  F+     +  F   
Subjt:  QSWWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFD----LLCLFQVR

Query:  LSISEFEEV--VVFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRA
         ++S+F ++  V  +W IW  RNN+V+ +  +   + + +  ++         + K+       S +         W  P  + +K N DA F      A
Subjt:  LSISEFEEV--VVFLWAIWNYRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRA

Query:  GAGCVLRDATGRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHG--DHNDISEVGLLMSSVRHLFHDEDFGGASHTLRA
          G ++R+  G  +   S +L    +   AE  A+L +++   + G+ +  +E D    I L++G   H+ ++     +S   + F    FG      R 
Subjt:  GAGCVLRDATGRVLLAASFRLPDCWSVDLAEGWAVLESVKLARLHGFYRFIIESDSARAIRLLHG--DHNDISEVGLLMSSVRHLFHDEDFGGASHTLRA

Query:  GNEVAHALAQMSLV-------SSVAQVWVD--FC
        GN++AH LA+           S    +W+D  FC
Subjt:  GNEVAHALAQMSLV-------SSVAQVWVD--FC

AT4G29090.1 Ribonuclease H-like superfamily protein3.6e-2328.29Show/hide
Query:  KVCDLFSASGR-WDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVR-APSSSDTGSLQSWWTFLWSLCLPSKLKVF
        KV DL   SGR W    I   F   +   I ++  G   +LD   W+Y  SG ++VKS Y +  Q +  R +P      SL   +  +W      K++ F
Subjt:  KVCDLFSASGR-WDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVR-APSSSDTGSLQSWWTFLWSLCLPSKLKVF

Query:  MWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMF-DLLCLFQVRLSISEFEE----VVVFLWAIWN
        +W+   + LP    L  R +     C+ C   +E   H+ ++C   R  W  S        +    ++ +L  +F +     ++E+    V   LW +W 
Subjt:  MWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMF-DLLCLFQVRLSISEFEE----VVVFLWAIWN

Query:  YRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFR
         RN LV+ R  +   +++   A D ++ +R+   A+       ++ SS       RW PP    +K NTDA++   + R G G VLR+  G V    +  
Subjt:  YRNNLVWKRPSDPFHRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFR

Query:  LPDCWSVDLAE----GWAVLESVKLARLHGFYRFIIESDSARAIRLLHGD
        LP   SV  AE     WAVL    L+R    Y  I ESDS   I +L+ D
Subjt:  LPDCWSVDLAE----GWAVLESVKLARLHGFYRFIIESDSARAIRLLHGD

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.8e-0535.38Show/hide
Query:  GSLQSWWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRC
        G    W   +W      K     W     RLPTR  LL  G+  P LC+LCN ++E   H+F+ C
Subjt:  GSLQSWWTFLWSLCLPSKLKVFMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTTTGCTCGCGGCCTTCGCTTCCTCTTTCGAGTAAGGTATGTGATCTATTTTCGGCCTCTGGACGGTGGGATGTTCCCAAGATTTCTACTCATTTTAATGCTGA
TGATTGTGCTAGTATTTTGAAAATTCCTTTGGGTGACTTTTGTGTTCTTGATCAGTTAGTGTGGAATTATGAGAAATCTGGAATTTTTTCTGTCAAGAGTTGTTATCGGC
TAGCTCTGCAATCTGTGTTGGTTCGGGCTCCTTCTTCGTCAGATACGGGCTCCCTTCAATCCTGGTGGACATTTCTGTGGTCTCTCTGCTTGCCAAGTAAGTTAAAAGTC
TTCATGTGGCGTTTGTGTCATGATAGACTCCCGACTCGTGTTAACTTATTGGTGAGGGGAGTGGAATGCCCACGTTTGTGTGTTCTGTGTAATCGATGGGAGGAAGATTC
TCTTCATATCTTCTGGCGGTGTAAATCTGTTCGTGGCTTTTGGCAATGTTCCCATTTTGGTTCTGTTTTTGAGTTGGATTCGGTTTCTTGTATGTTTGATCTATTGTGCC
TTTTCCAGGTCCGTTTATCTATATCTGAGTTTGAGGAGGTTGTGGTATTCTTGTGGGCCATCTGGAATTATCGAAATAACCTGGTTTGGAAGCGGCCTTCTGATCCTTTT
CATCGGGATATTGGGGCTTTTGCATCAGATTATATTCAGAGCTTTCGTTTAGTGGCTGCGGCAAAGCGAGCTTCAAAGTCGGCGGGTCTGTCTGCATCGTCATCATCTGT
GTCAATGGCTTCTCGGTGGCTTCCTCCGTCTGGCTCTTTGCTCAAACTTAACACTGATGCATCTTTTATTTCGGTGTCTGGGCGAGCGGGTGCTGGATGTGTTCTCCGGG
ATGCTACTGGTAGAGTTTTGCTAGCAGCTTCTTTTCGTCTTCCTGATTGCTGGTCTGTCGATTTGGCTGAAGGATGGGCTGTTTTGGAAAGTGTCAAATTGGCTCGATTG
CATGGTTTTTACAGGTTTATCATTGAGTCTGACTCGGCTCGTGCGATTCGTCTTCTTCATGGTGATCACAATGATATTTCCGAGGTTGGTTTACTTATGTCTTCAGTGCG
CCATCTTTTCCATGATGAAGATTTTGGGGGCGCTTCACATACGCTGCGTGCGGGCAATGAAGTTGCTCATGCTCTTGCTCAAATGTCTTTAGTTTCTTCTGTTGCTCAGG
TTTGGGTTGATTTTTGCCCACCTTGCATTTCGTCGGTTGTTTTTAAGGATGTTCTAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTTTGCTCGCGGCCTTCGCTTCCTCTTTCGAGTAAGGTATGTGATCTATTTTCGGCCTCTGGACGGTGGGATGTTCCCAAGATTTCTACTCATTTTAATGCTGA
TGATTGTGCTAGTATTTTGAAAATTCCTTTGGGTGACTTTTGTGTTCTTGATCAGTTAGTGTGGAATTATGAGAAATCTGGAATTTTTTCTGTCAAGAGTTGTTATCGGC
TAGCTCTGCAATCTGTGTTGGTTCGGGCTCCTTCTTCGTCAGATACGGGCTCCCTTCAATCCTGGTGGACATTTCTGTGGTCTCTCTGCTTGCCAAGTAAGTTAAAAGTC
TTCATGTGGCGTTTGTGTCATGATAGACTCCCGACTCGTGTTAACTTATTGGTGAGGGGAGTGGAATGCCCACGTTTGTGTGTTCTGTGTAATCGATGGGAGGAAGATTC
TCTTCATATCTTCTGGCGGTGTAAATCTGTTCGTGGCTTTTGGCAATGTTCCCATTTTGGTTCTGTTTTTGAGTTGGATTCGGTTTCTTGTATGTTTGATCTATTGTGCC
TTTTCCAGGTCCGTTTATCTATATCTGAGTTTGAGGAGGTTGTGGTATTCTTGTGGGCCATCTGGAATTATCGAAATAACCTGGTTTGGAAGCGGCCTTCTGATCCTTTT
CATCGGGATATTGGGGCTTTTGCATCAGATTATATTCAGAGCTTTCGTTTAGTGGCTGCGGCAAAGCGAGCTTCAAAGTCGGCGGGTCTGTCTGCATCGTCATCATCTGT
GTCAATGGCTTCTCGGTGGCTTCCTCCGTCTGGCTCTTTGCTCAAACTTAACACTGATGCATCTTTTATTTCGGTGTCTGGGCGAGCGGGTGCTGGATGTGTTCTCCGGG
ATGCTACTGGTAGAGTTTTGCTAGCAGCTTCTTTTCGTCTTCCTGATTGCTGGTCTGTCGATTTGGCTGAAGGATGGGCTGTTTTGGAAAGTGTCAAATTGGCTCGATTG
CATGGTTTTTACAGGTTTATCATTGAGTCTGACTCGGCTCGTGCGATTCGTCTTCTTCATGGTGATCACAATGATATTTCCGAGGTTGGTTTACTTATGTCTTCAGTGCG
CCATCTTTTCCATGATGAAGATTTTGGGGGCGCTTCACATACGCTGCGTGCGGGCAATGAAGTTGCTCATGCTCTTGCTCAAATGTCTTTAGTTTCTTCTGTTGCTCAGG
TTTGGGTTGATTTTTGCCCACCTTGCATTTCGTCGGTTGTTTTTAAGGATGTTCTAGTGTAG
Protein sequenceShow/hide protein sequence
MSVCSRPSLPLSSKVCDLFSASGRWDVPKISTHFNADDCASILKIPLGDFCVLDQLVWNYEKSGIFSVKSCYRLALQSVLVRAPSSSDTGSLQSWWTFLWSLCLPSKLKV
FMWRLCHDRLPTRVNLLVRGVECPRLCVLCNRWEEDSLHIFWRCKSVRGFWQCSHFGSVFELDSVSCMFDLLCLFQVRLSISEFEEVVVFLWAIWNYRNNLVWKRPSDPF
HRDIGAFASDYIQSFRLVAAAKRASKSAGLSASSSSVSMASRWLPPSGSLLKLNTDASFISVSGRAGAGCVLRDATGRVLLAASFRLPDCWSVDLAEGWAVLESVKLARL
HGFYRFIIESDSARAIRLLHGDHNDISEVGLLMSSVRHLFHDEDFGGASHTLRAGNEVAHALAQMSLVSSVAQVWVDFCPPCISSVVFKDVLV