| GenBank top hits | e value | %identity | Alignment |
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| OMO69928.1 reverse transcriptase [Corchorus capsularis] | 1.4e-44 | 46.45 | Show/hide |
Query: FNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDG----FLAL----------FFFR-------AYKIVAKVIVKRMKWILQDIISENQ
FN L++I +V+TEMN LL+ F EE+ A+ QMHP+KAP PD +AL FR YKI++KV+V R+K L + ISENQ
Subjt: FNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDG----FLAL----------FFFR-------AYKIVAKVIVKRMKWILQDIISENQ
Query: SAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGD
SAF+ R I DNI++ +E LHT++S + G++G+ KLDMSKAYDRVEW FL+ +M++LGF RWV +IM C+ + FS+++N + T P RGLRQGD
Subjt: SAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGD
Query: PHSPHIY-FCS
P S +++ FC+
Subjt: PHSPHIY-FCS
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| XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber] | 6.8e-44 | 39.34 | Show/hide |
Query: FNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFF-----------------------------------------------F
F+ +L I +VS EMN LLA F EEV A++QMHP+KAP PDG +F+ F
Subjt: FNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFF-----------------------------------------------F
Query: R-------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVG
R YKI++KV+ R+K +L+++I E+QSAF+ RSI DN+++ E +H I R+ G++ + KLDMSKAYDRVEWS+L+ ++ KLGFH +W+
Subjt: R-------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVG
Query: LIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
L+M C++T +S+L+N +P G I+P RGLRQGDP SP+++ A
Subjt: LIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
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| XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina] | 1.5e-46 | 35.8 | Show/hide |
Query: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFFFRAYK--------------------------------
+F + P NA L+ + +V MN L F EE+ A+ QM P+KAP PDG A+FF + +K
Subjt: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFFFRAYK--------------------------------
Query: ----------------------IVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLM
+VAK I R+K L IIS QSAF+ R I DNIIIG+ECLH I+ + + V KLD+ KAYDRVEWSFLK ++
Subjt: ----------------------IVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLM
Query: IKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSAL--RHCLHYYQEHPIKEAS----------QAYNQV------WRLF
+LGF +W+ LIM+CITT FS++IN G I PQRGLRQG P SP+++ A + +H+ + + A +NQ WRL
Subjt: IKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSAL--RHCLHYYQEHPIKEAS----------QAYNQV------WRLF
Query: TNPSLLASRVITATYAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQV
NP L ++VI A Y T A V S+ SF WRS +W R +L +G R ++
Subjt: TNPSLLASRVITATYAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQV
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| XP_030936038.1 uncharacterized protein LOC115961147 [Quercus lobata] | 8.0e-45 | 40.23 | Show/hide |
Query: FASIYPDE--AIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFF------------------------------------
F +IY + A F A+L I +VSTEMN+ LLA F EEV A+KQMHP+KAP PDG +FF
Subjt: FASIYPDE--AIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFF------------------------------------
Query: -----------FR-------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVL
FR YK+++KV+ R+K +L +I E+QS F+ R I DN+++ E +H I R+ G++ + KLDMS AYDRVEW +L+ +
Subjt: -----------FR-------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVL
Query: MIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
M K+GFH RW+ LIM C+TT +S+LIN +P G I P RGLRQGDP SP+++ A
Subjt: MIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
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| XP_030942013.1 uncharacterized protein LOC115967068 [Quercus lobata] | 6.8e-44 | 39.61 | Show/hide |
Query: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFF-------------------------------------
+F++ YPDE F +L I +VS +MND LL F EE+ RA+KQMHP+K+P P+ +FF
Subjt: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFF-------------------------------------
Query: ----------FR-------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLM
FR YKIV+KV+ R+K +L IISE QSAF+ R I DN+++ E +H I +R G+KG + KLDMSKAYDRVEW++L+ +M
Subjt: ----------FR-------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLM
Query: IKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
+LGF RW+ L+M C+ + +S+L+N +P G I+P RGLRQGDP SP+++ A
Subjt: IKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1R3HHY9 Reverse transcriptase | 6.6e-45 | 46.45 | Show/hide |
Query: FNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDG----FLAL----------FFFR-------AYKIVAKVIVKRMKWILQDIISENQ
FN L++I +V+TEMN LL+ F EE+ A+ QMHP+KAP PD +AL FR YKI++KV+V R+K L + ISENQ
Subjt: FNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDG----FLAL----------FFFR-------AYKIVAKVIVKRMKWILQDIISENQ
Query: SAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGD
SAF+ R I DNI++ +E LHT++S + G++G+ KLDMSKAYDRVEW FL+ +M++LGF RWV +IM C+ + FS+++N + T P RGLRQGD
Subjt: SAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGD
Query: PHSPHIY-FCS
P S +++ FC+
Subjt: PHSPHIY-FCS
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| A0A2N9EWI9 Reverse transcriptase domain-containing protein | 2.1e-43 | 43.61 | Show/hide |
Query: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFL-------------------ALFFFR-------AYKIVAKVI
+FAS P F +L + K++ MN L A + EEV +A+ QMHPSK+P PDG + ++ FR YKI++KV+
Subjt: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFL-------------------ALFFFR-------AYKIVAKVI
Query: VKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINN
R+K +L ++SE+QSAF+ R I DN+ + E LH +KS+R G+KG + KLDMSKAYDRVEW FL+ LM KLGF WV L+M CI T +SI++N
Subjt: VKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINN
Query: KPTGAIIPQRGLRQGDPHSPHIYFCSA
+P G I P RG+RQGDP SP+++ A
Subjt: KPTGAIIPQRGLRQGDPHSPHIYFCSA
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| A0A2N9F345 Uncharacterized protein | 9.5e-44 | 46.23 | Show/hide |
Query: LKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFL-------------------ALFFFR-------AYKIVAKVIVKRMKWILQDIISEN
+ E+ V+ MN +LL F EEV +A+ QMHP+KAP PDG + + FR YKI +KV+V RMK +L +ISE+
Subjt: LKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFL-------------------ALFFFR-------AYKIVAKVIVKRMKWILQDIISEN
Query: QSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQG
QSAF+ R I DN+II E +H +K+ R G + KLDMSKAYDRVEW +L+ +M+KLGFHP WV LIM C+TTA ++I++N +P G + PQRGLRQG
Subjt: QSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQG
Query: DPHSPHIYFCSA
DP SP+++ A
Subjt: DPHSPHIYFCSA
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| A0A2N9FT59 Reverse transcriptase domain-containing protein | 3.0e-45 | 48.08 | Show/hide |
Query: LKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFL---------------ALFFFR-------AYKIVAKVIVKRMKWILQDIISENQSAF
L E+ V+ MN+ LL F EE+ RA+ QMHPSKAP PDG + + FR YKIV+KV+V RMK IL +IS++QSAF
Subjt: LKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFL---------------ALFFFR-------AYKIVAKVIVKRMKWILQDIISENQSAF
Query: ITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHS
+ R I DN+II E +H +K+ R G + KLDMSKAYDRVEW +L+ +M+KLGFH +WV L+M+C+ +A +SIL+N +P G I PQRGLRQGDP S
Subjt: ITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHS
Query: PHIYFCSA
P+++ A
Subjt: PHIYFCSA
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| A0A7N2R0C3 Reverse transcriptase domain-containing protein | 1.6e-43 | 37.65 | Show/hide |
Query: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFFFR-----------------------------------
+++S +P E F A L + +V+ +MN+ LL F EEV +A+ QMHP+K+P PDG +FF +
Subjt: MFASIYPDEAIFNATLKEIHCKVSTEMNDKLLAHFDCEEVIRAVKQMHPSKAPDPDGFLALFFFR-----------------------------------
Query: -------------------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLM
YK+V+KV+ R+K +L D++ E QSAF+ R I DN+++ E +H I RR G++G + KLDMSKAYDRVEW +L+ +M
Subjt: -------------------AYKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLM
Query: IKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
++GF RW+ L+M C+TT FS+LIN +P G I+P RGLRQGDP SP+++ A
Subjt: IKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIYFCSA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 4.9e-05 | 25.19 | Show/hide |
Query: KIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKS-RRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTA
KI+ K++ R++ ++ +I +Q FI + NI + ++ I+ R K +V +D KA+D+++ F+ + KLG ++ +I
Subjt: KIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKS-RRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTA
Query: KFSILINNKPTGAIIPQRGLRQGDPHSPHIY
+I++N + A + G RQG P SP ++
Subjt: KFSILINNKPTGAIIPQRGLRQGDPHSPHIY
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 2.2e-13 | 36.64 | Show/hide |
Query: YKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTA
YKIVAK I R+K +L ++I +QS + R+IFDN+ + + LH +RRTG LD KA+DRV+ +L + F P++VG + +A
Subjt: YKIVAKVIVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTA
Query: KFSILINNKPTGAIIPQRGLRQGDPHSPHIY
+ + IN T + RG+RQG P S +Y
Subjt: KFSILINNKPTGAIIPQRGLRQGDPHSPHIY
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| Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 1.3e-05 | 34.48 | Show/hide |
Query: HTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIY
H IK RR K Y LD+ KA+D V + M G IM IT A +I++ + T I + G++QGDP SP ++
Subjt: HTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWVGLIMDCITTAKFSILINNKPTGAIIPQRGLRQGDPHSPHIY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G10000.1 Ribonuclease H-like superfamily protein | 5.6e-04 | 32.61 | Show/hide |
Query: NPLAAEVQAIVQALRLIQRLQYTEAQVCSDSINAIWMITKEMDTNTDVAHWITSIQDMCRAFQDISFHYIPRNRNLRADAMVKHALAHTSNI
+PLAAE AI A+ +L+ ++ V SDS + + + + N ++ + I+ + F+ ISF +IPR N ADA K +L + NI
Subjt: NPLAAEVQAIVQALRLIQRLQYTEAQVCSDSINAIWMITKEMDTNTDVAHWITSIQDMCRAFQDISFHYIPRNRNLRADAMVKHALAHTSNI
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| AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 6.6e-05 | 33.68 | Show/hide |
Query: PLAAEVQAIVQALRLIQRLQYTEAQVCSDSINAIWMITKEMDTNTDVAHWITSIQDMCRAFQDISFHYIPRNRNLRADAMVKHALAHTSNIVQSS
PL AE A+ AL+ Q + T+ + SDS I IT E +T+ I I ++ F D+SF ++PR+ N AD + K +L S + S+
Subjt: PLAAEVQAIVQALRLIQRLQYTEAQVCSDSINAIWMITKEMDTNTDVAHWITSIQDMCRAFQDISFHYIPRNRNLRADAMVKHALAHTSNIVQSS
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| AT4G20520.1 RNA binding;RNA-directed DNA polymerases | 3.6e-11 | 37.35 | Show/hide |
Query: IVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWV
+V+R+K ++ ++I Q++FI R DNI+ E +H+++ R+ G KG++ KLD+ KAYDR+ W +L+ +I GF W+
Subjt: IVKRMKWILQDIISENQSAFITRRSIFDNIIIGHECLHTIKSRRTGRKGYVTFKLDMSKAYDRVEWSFLKVLMIKLGFHPRWV
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