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Lag0001793 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001793
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosome-inactivating protein bryodin II
Genome locationchr4:35424121..35424748
RNA-Seq ExpressionLag0001793
SyntenyLag0001793
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0030598 - rRNA N-glycosylase activity (molecular function)
InterPro domainsIPR016138 - Ribosome-inactivating protein, subdomain 1
IPR036041 - Ribosome-inactivating protein superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
P24817 Ribosome-inactivating protein beta-momorcharin7.2e-0532.47Show/hide
Query:  ISFTPQVYDIPVLNQAARLRWCFSFIHL-SHSSDRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRV
        + F+ +VYDIP+L         F  ++L S++ + I  A+D++   ++ Y +   SYFF+++P EA  +LF GT ++
Subjt:  ISFTPQVYDIPVLNQAARLRWCFSFIHL-SHSSDRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRV

P28590 Abrin-c3.6e-0436.25Show/hide
Query:  VYDIPVLNQAARL--RWCFSFIHLSHSS-DRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRVANRSTSS
        ++DIPVL     +  R  +  + LS+S  + I   +D++ A ++ Y +  +SYF +DAP  AST LF GT R + R   S
Subjt:  VYDIPVLNQAARL--RWCFSFIHLSHSS-DRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRVANRSTSS

P29339 Ribosome-inactivating protein momordin II1.2e-0432.47Show/hide
Query:  ISFTPQVYDIPVLNQAARLRWCFSFIHL-SHSSDRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRV
        + F+ +VYDIP+L         F  + L S++ + I  A+D++   ++ Y +   SYFF+++P EA  +LF GT ++
Subjt:  ISFTPQVYDIPVLNQAARLRWCFSFIHL-SHSSDRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRV

P98184 Ribosome-inactivating protein bryodin II1.9e-0538.57Show/hide
Query:  TPQVYDIPVLNQAARLRWCFSFIHL-SHSSDRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVG
        TP+VYDIPVL  AA     F  + L +++ + +  ALD+    ++ Y +   +YF  DA  EA+ VLF G
Subjt:  TPQVYDIPVLNQAARLRWCFSFIHL-SHSSDRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVG

Q06076 Abrin-d3.6e-0436.25Show/hide
Query:  VYDIPVLNQAARL--RWCFSFIHLSHSS-DRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRVANRSTSS
        ++DIPVL     +  R  +  + LS+S  + I   +D++ A ++ Y +  +SYF +DAP  AST LF GT R + R   S
Subjt:  VYDIPVLNQAARL--RWCFSFIHLSHSS-DRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRVANRSTSS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGATGAAATTTCTAATGTTGTATGCCACCATTTCTCTGTGTTTGTGTTTGTGCTTTCATTGCGCAAACGCTGATATTGGCATTGGCATTATTTCCTTCACTCC
ACAAGTCTATGACATTCCTGTTTTGAACCAAGCTGCACGCCTTCGATGGTGCTTCTCCTTCATTCACCTTTCCCACTCCTCCGATCGCATCATTTTCGCCCTCGATTTGT
CGACCGCTTCCATTATCGGCTATAGCTCAACTTTAAAATCCTACTTCTTCCAAGACGCTCCCCAAGAAGCCTCTACGGTCCTTTTCGTTGGTACCATCCGCGTCGCAAAT
CGCTCTACAAGTTCACCGGTGCGCCGCCGGTGTCAACAGGGGCTGCACTCTCCCATCACTGATCAATGGGGTACTACAAATTTTGGGCATTGTAGGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGATGAAATTTCTAATGTTGTATGCCACCATTTCTCTGTGTTTGTGTTTGTGCTTTCATTGCGCAAACGCTGATATTGGCATTGGCATTATTTCCTTCACTCC
ACAAGTCTATGACATTCCTGTTTTGAACCAAGCTGCACGCCTTCGATGGTGCTTCTCCTTCATTCACCTTTCCCACTCCTCCGATCGCATCATTTTCGCCCTCGATTTGT
CGACCGCTTCCATTATCGGCTATAGCTCAACTTTAAAATCCTACTTCTTCCAAGACGCTCCCCAAGAAGCCTCTACGGTCCTTTTCGTTGGTACCATCCGCGTCGCAAAT
CGCTCTACAAGTTCACCGGTGCGCCGCCGGTGTCAACAGGGGCTGCACTCTCCCATCACTGATCAATGGGGTACTACAAATTTTGGGCATTGTAGGCTATGA
Protein sequenceShow/hide protein sequence
MEKMKFLMLYATISLCLCLCFHCANADIGIGIISFTPQVYDIPVLNQAARLRWCFSFIHLSHSSDRIIFALDLSTASIIGYSSTLKSYFFQDAPQEASTVLFVGTIRVAN
RSTSSPVRRRCQQGLHSPITDQWGTTNFGHCRL