; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr4:35620233..35620731
RNA-Seq ExpressionLag0001807
SyntenyLag0001807
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02246.1 uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]2.3e-1942.18Show/hide
Query:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT
        +S V   TTNFS+PPLNQLLNQ++S+                   +YK EGHL+G  P P K+I     +I  S S I         AEA    +S +T 
Subjt:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT

Query:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV
         + +NP +DQW+    LLLGW+YNSMT EVA Q+ GF +A++LW A+
Subjt:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV

XP_016901223.1 PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo]3.3e-1840.14Show/hide
Query:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT
        +S V   TTNFS+PPLNQLLNQ++S+                   +YK EG+L+G  P P K+I    A    S S I         AEA    +S +  
Subjt:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT

Query:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV
         + +NP +DQW+    LLLGW+YNSMT EVA Q+ GF + ++LW A+
Subjt:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]5.7e-1840.29Show/hide
Query:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL
        +  FS+PPLNQ+LNQ+T++                   +YKLEGHL+   P PS ++           S+  +  T  E    A   AS + T   +NPL
Subjt:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL

Query:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA
        ++QWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW A
Subjt:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]5.7e-1840.29Show/hide
Query:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL
        +  FS+PPLNQ+LNQ+T++                   +YKLEGHL+   P PS ++           S+  +  T  E    A   AS + T   +NPL
Subjt:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL

Query:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA
        ++QWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW A
Subjt:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]7.9e-2040.14Show/hide
Query:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT
        +S +   TTNFS+PPLNQ+LNQ+ S+                   +YKL+GHL+     P K+I                   NP    ++RS     TT
Subjt:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT

Query:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV
         + +NP +DQWV  D LLLGW+YNSMTPEVA Q+MGF +A++LW A+
Subjt:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV

TrEMBL top hitse value%identityAlignment
A0A1S4DZ26 uncharacterized protein LOC1079912021.6e-1840.14Show/hide
Query:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT
        +S V   TTNFS+PPLNQLLNQ++S+                   +YK EG+L+G  P P K+I    A    S S I         AEA    +S +  
Subjt:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT

Query:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV
         + +NP +DQW+    LLLGW+YNSMT EVA Q+ GF + ++LW A+
Subjt:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.7e-1840.29Show/hide
Query:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL
        +  FS+PPLNQ+LNQ+T++                   +YKLEGHL+   P PS ++           S+  +  T  E    A   AS + T   +NPL
Subjt:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL

Query:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA
        ++QWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW A
Subjt:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X42.7e-1840.29Show/hide
Query:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL
        +  FS+PPLNQ+LNQ+T++                   +YKLEGHL+   P PS ++           S+  +  T  E    A   AS + T   +NPL
Subjt:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL

Query:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA
        ++QWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW A
Subjt:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X32.7e-1840.29Show/hide
Query:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL
        +  FS+PPLNQ+LNQ+T++                   +YKLEGHL+   P PS ++           S+  +  T  E    A   AS + T   +NPL
Subjt:  TTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPL

Query:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA
        ++QWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW A
Subjt:  YDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAA

A0A5D3BVJ1 Uncharacterized protein1.1e-1942.18Show/hide
Query:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT
        +S V   TTNFS+PPLNQLLNQ++S+                   +YK EGHL+G  P P K+I     +I  S S I         AEA    +S +T 
Subjt:  ISAVAPGTTNFSSPPLNQLLNQITSI-------------------NYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTT

Query:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV
         + +NP +DQW+    LLLGW+YNSMT EVA Q+ GF +A++LW A+
Subjt:  VEEINPLYDQWVAVDQLLLGWLYNSMTPEVATQVMGFESAQELWAAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGCGTCAATTCCACCGAGATCTCAGCCGTAGCACCGGGGACAACCAACTTCAGCAGTCCTCCGTTGAATCAGCTGCTAAATCAAATTACATCTATAAACTACAA
GTTGGAGGGACATCTCTCTGGTTCTAAACCGTGGCCTTCAAAATATATCCGAGCTTCAGTAGCACGGATTGATCCTTCTCCCTCGTCGATAGGAGCAGGTAATACAAATC
CAGAAATCGCTGAAGCTGCAAGGAGTGAAGCTTCAGAAACCACCACTGTCGAAGAAATAAACCCTTTGTATGATCAATGGGTTGCAGTGGATCAATTGCTTTTAGGTTGG
TTGTATAATTCAATGACGCCAGAGGTAGCAACTCAAGTGATGGGGTTCGAAAGCGCTCAAGAATTATGGGCGGCAGTTGTTGGTACGATTTTCCGCAAGCGCACGGGTCA
CAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGCGTCAATTCCACCGAGATCTCAGCCGTAGCACCGGGGACAACCAACTTCAGCAGTCCTCCGTTGAATCAGCTGCTAAATCAAATTACATCTATAAACTACAA
GTTGGAGGGACATCTCTCTGGTTCTAAACCGTGGCCTTCAAAATATATCCGAGCTTCAGTAGCACGGATTGATCCTTCTCCCTCGTCGATAGGAGCAGGTAATACAAATC
CAGAAATCGCTGAAGCTGCAAGGAGTGAAGCTTCAGAAACCACCACTGTCGAAGAAATAAACCCTTTGTATGATCAATGGGTTGCAGTGGATCAATTGCTTTTAGGTTGG
TTGTATAATTCAATGACGCCAGAGGTAGCAACTCAAGTGATGGGGTTCGAAAGCGCTCAAGAATTATGGGCGGCAGTTGTTGGTACGATTTTCCGCAAGCGCACGGGTCA
CAAGTAA
Protein sequenceShow/hide protein sequence
MTSVNSTEISAVAPGTTNFSSPPLNQLLNQITSINYKLEGHLSGSKPWPSKYIRASVARIDPSPSSIGAGNTNPEIAEAARSEASETTTVEEINPLYDQWVAVDQLLLGW
LYNSMTPEVATQVMGFESAQELWAAVVGTIFRKRTGHK