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Lag0001855 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001855
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:36233027..36236829
RNA-Seq ExpressionLag0001855
SyntenyLag0001855
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016178837.1 uncharacterized protein LOC107621322 [Arachis ipaensis]3.5e-0626.62Show/hide
Query:  WSALDVVSSTSGILLMWK---KNCIDVIDTIMGSSI-----------SIDVEVSLLQYTNDIVIFCPDEASVLRD---ILKLFWAGSWLSLNLSKTTLIG
        WS +D+V    G    W+     C+     I+G ++             ++E+S +Q+ ND ++FCP E   +++   +L+ F   S LS+N  K++LI 
Subjt:  WSALDVVSSTSGILLMWK---KNCIDVIDTIMGSSI-----------SIDVEVSLLQYTNDIVIFCPDEASVLRD---ILKLFWAGSWLSLNLSKTTLIG

Query:  TNLSKEEVDVWAKEFQCQSETLPI-WLSFRWKSPQRAF--WESLINKLRAKLDV
         N  ++ V    +  +C+  TLP+ +L     +  R    W+ +INK+  KL +
Subjt:  TNLSKEEVDVWAKEFQCQSETLPI-WLSFRWKSPQRAF--WESLINKLRAKLDV

XP_020992360.1 uncharacterized protein LOC110278447 [Arachis duranensis]4.6e-0627.27Show/hide
Query:  WSALDVVSSTSGILLMWK---KNCIDVIDTIMGSSI-----------SIDVEVSLLQYTNDIVIFCPDEASVL---RDILKLFWAGSWLSLNLSKTTLIG
        WS +D+V    G    W+   K C+ +   ++G ++              +E+S LQ+T+D ++FCP E   +   R +L  F   S LS+N  K++LI 
Subjt:  WSALDVVSSTSGILLMWK---KNCIDVIDTIMGSSI-----------SIDVEVSLLQYTNDIVIFCPDEASVL---RDILKLFWAGSWLSLNLSKTTLIG

Query:  TNLSKEEVDVWAKEFQCQSETLPI-WLSFRWKSPQRAF--WESLINKLRAKLDV
         N  ++ V        C++ TLP+ +L    ++  R    W+ +I+K+  KL +
Subjt:  TNLSKEEVDVWAKEFQCQSETLPI-WLSFRWKSPQRAF--WESLINKLRAKLDV

XP_030930554.1 uncharacterized protein LOC115956265 [Quercus lobata]3.5e-0629.41Show/hide
Query:  DLISKAKLDMVILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGSSISIDVEVSLLQYTNDIV---IFCPDEASVL--
        +L+ + K D+V +QE+ L  TN + VK +W S  + W ALD + ++ G++LMW +   + +D+++G S SI V +  +    + +   ++ P + S+   
Subjt:  DLISKAKLDMVILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGSSISIDVEVSLLQYTNDIV---IFCPDEASVL--

Query:  ----RDILKLFWAGSWLSL
             D+++  WAG+W  L
Subjt:  ----RDILKLFWAGSWLSL

XP_030939916.1 uncharacterized protein LOC115964808 [Quercus lobata]1.6e-0633.62Show/hide
Query:  DLISKAKLDMVILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGS-SISIDVEVSLLQYTNDIV--IFCPDEASVL--
        +L+ + K D+V LQE+ L  T+ + VK +W S  + W ALD + +  G++LMW K  ++ +D+++GS SISI V   +L     I   ++ P + S+   
Subjt:  DLISKAKLDMVILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGS-SISIDVEVSLLQYTNDIV--IFCPDEASVL--

Query:  ----RDILKLFWAGSW
             D+++  WAG+W
Subjt:  ----RDILKLFWAGSW

XP_031739979.1 uncharacterized protein LOC116403332 [Cucumis sativus]1.2e-0645.83Show/hide
Query:  DLISKAKLDMVILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGS-SISI
        +L+ K   D+VILQ++ +   NR  VK VWSS  +GW+ L+   S+ GIL++WK++ I V+D+I G  SISI
Subjt:  DLISKAKLDMVILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGS-SISI

TrEMBL top hitse value%identityAlignment
A0A2N9GBB9 Reverse transcriptase domain-containing protein5.5e-0533.73Show/hide
Query:  FVECERFRGLPKKSSDLISKAKLDM-VILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGS
        F   E  R L K+++      K  M V LQE  L + +   ++ +WS++ +GW ALD V++  G+LLMW K  +++ D+++G+
Subjt:  FVECERFRGLPKKSSDLISKAKLDM-VILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSGILLMWKKNCIDVIDTIMGS

A0A6A2XWD2 Uncharacterized protein3.2e-0529.71Show/hide
Query:  WSALDVVSSTSGILLMWKKNCIDVIDTIMGSSISIDVEVSLLQYTNDIVIFC-PDEASVL--RDILKLFWAGSWLSLNLSKTTLIGTNLSKEEVDVWAKE
        W  L  V    G  L WK     +   ++       + +S LQ+ +D++IFC   +  +L  + +L++F   S L LNL+K  L G N+S+EEV  WA  
Subjt:  WSALDVVSSTSGILLMWKKNCIDVIDTIMGSSISIDVEVSLLQYTNDIVIFC-PDEASVL--RDILKLFWAGSWLSLNLSKTTLIGTNLSKEEVDVWAKE

Query:  FQCQSETLP---IWLSFRWKSPQRAFWESLINKLRAKL
          C     P   + L    K    A W+ ++ K   KL
Subjt:  FQCQSETLP---IWLSFRWKSPQRAFWESLINKLRAKL

A0A6A2ZHX3 Uncharacterized protein7.1e-0531.96Show/hide
Query:  LQYTNDIVIFCPDEASV---LRDILKLFWAGSWLSLNLSKTTLIGTNLSKEEVDVWAKEFQCQSETLPI---WLSFRWKSPQRAFWESLINKLRAKL
        LQ+ +D+++FC D  +    ++ +L+ F   + L LN+SK++L G N+  E ++ WAKE  C     P+    L    K    A WE +I+    KL
Subjt:  LQYTNDIVIFCPDEASV---LRDILKLFWAGSWLSLNLSKTTLIGTNLSKEEVDVWAKEFQCQSETLPI---WLSFRWKSPQRAFWESLINKLRAKL

A0A6A3BDL8 Myosin-152.4e-0532.99Show/hide
Query:  LQYTNDIVIFCPDEASV---LRDILKLFWAGSWLSLNLSKTTLIGTNLSKEEVDVWAKEFQCQSETLPIW---LSFRWKSPQRAFWESLINKLRAKL
        LQ+ +D+++FC D  S    ++ +L+ F   + L LN+SK++L G N+  E ++ WAKE  C     P+    L    K    A WE +I+    KL
Subjt:  LQYTNDIVIFCPDEASV---LRDILKLFWAGSWLSLNLSKTTLIGTNLSKEEVDVWAKEFQCQSETLPIW---LSFRWKSPQRAFWESLINKLRAKL

A0A6P5N693 uncharacterized protein LOC1102784472.2e-0627.27Show/hide
Query:  WSALDVVSSTSGILLMWK---KNCIDVIDTIMGSSI-----------SIDVEVSLLQYTNDIVIFCPDEASVL---RDILKLFWAGSWLSLNLSKTTLIG
        WS +D+V    G    W+   K C+ +   ++G ++              +E+S LQ+T+D ++FCP E   +   R +L  F   S LS+N  K++LI 
Subjt:  WSALDVVSSTSGILLMWK---KNCIDVIDTIMGSSI-----------SIDVEVSLLQYTNDIVIFCPDEASVL---RDILKLFWAGSWLSLNLSKTTLIG

Query:  TNLSKEEVDVWAKEFQCQSETLPI-WLSFRWKSPQRAF--WESLINKLRAKLDV
         N  ++ V        C++ TLP+ +L    ++  R    W+ +I+K+  KL +
Subjt:  TNLSKEEVDVWAKEFQCQSETLPI-WLSFRWKSPQRAF--WESLINKLRAKLDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCACTCCAGAACATTCAATATACTTTCACATTTCTGCATTTCGCTCTGGAAAGTTGATGCTTGTGCATATGGCAAGGGCGTTGAGGTAGTAGCCAATAACGACAA
CGAGCTTCCAAGGTGCCTTTATGAAGATAATTTTGTGGAATGTGAGAGGTTTAGGGGCTTGCCCAAAAAGAGCTCAGATCTCATTAGTAAAGCTAAGCTGGATATGGTCA
TTTTGCAAGAAGCTAGTCTTGGTAAAACGAATAGAACAAAGGTGAAGCCCGTGTGGAGCTCCAAAGATATGGGTTGGTCGGCCCTAGATGTTGTTAGTTCTACAAGTGGA
ATTCTTTTGATGTGGAAGAAAAATTGTATAGATGTTATAGACACAATTATGGGGTCCTCCATCTCAATTGACGTGGAAGTTTCCCTCCTTCAGTACACTAATGACATTGT
TATATTCTGCCCCGATGAGGCCTCTGTCTTAAGAGACATTTTGAAGTTGTTTTGGGCTGGTTCTTGGCTTTCGTTGAATTTGTCAAAGACTACATTGATTGGGACTAATT
TGAGTAAGGAAGAAGTTGATGTTTGGGCAAAGGAGTTTCAGTGTCAATCTGAGACTTTACCGATATGGCTTTCCTTTAGGTGGAAATCACCACAGAGAGCATTTTGGGAG
TCGTTGATTAATAAACTTAGGGCTAAGTTGGATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCACTCCAGAACATTCAATATACTTTCACATTTCTGCATTTCGCTCTGGAAAGTTGATGCTTGTGCATATGGCAAGGGCGTTGAGGTAGTAGCCAATAACGACAA
CGAGCTTCCAAGGTGCCTTTATGAAGATAATTTTGTGGAATGTGAGAGGTTTAGGGGCTTGCCCAAAAAGAGCTCAGATCTCATTAGTAAAGCTAAGCTGGATATGGTCA
TTTTGCAAGAAGCTAGTCTTGGTAAAACGAATAGAACAAAGGTGAAGCCCGTGTGGAGCTCCAAAGATATGGGTTGGTCGGCCCTAGATGTTGTTAGTTCTACAAGTGGA
ATTCTTTTGATGTGGAAGAAAAATTGTATAGATGTTATAGACACAATTATGGGGTCCTCCATCTCAATTGACGTGGAAGTTTCCCTCCTTCAGTACACTAATGACATTGT
TATATTCTGCCCCGATGAGGCCTCTGTCTTAAGAGACATTTTGAAGTTGTTTTGGGCTGGTTCTTGGCTTTCGTTGAATTTGTCAAAGACTACATTGATTGGGACTAATT
TGAGTAAGGAAGAAGTTGATGTTTGGGCAAAGGAGTTTCAGTGTCAATCTGAGACTTTACCGATATGGCTTTCCTTTAGGTGGAAATCACCACAGAGAGCATTTTGGGAG
TCGTTGATTAATAAACTTAGGGCTAAGTTGGATGTGTGA
Protein sequenceShow/hide protein sequence
MSHSRTFNILSHFCISLWKVDACAYGKGVEVVANNDNELPRCLYEDNFVECERFRGLPKKSSDLISKAKLDMVILQEASLGKTNRTKVKPVWSSKDMGWSALDVVSSTSG
ILLMWKKNCIDVIDTIMGSSISIDVEVSLLQYTNDIVIFCPDEASVLRDILKLFWAGSWLSLNLSKTTLIGTNLSKEEVDVWAKEFQCQSETLPIWLSFRWKSPQRAFWE
SLINKLRAKLDV