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Lag0001899 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001899
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr4:36736385..36736761
RNA-Seq ExpressionLag0001899
SyntenyLag0001899
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR41266.1 hypothetical protein CICLE_v10027237mg, partial [Citrus clementina]4.6e-0438.36Show/hide
Query:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
        D ++AE  ++++G+K AA+++   ++IES+SK V       N +AH L K+AL+     VW +EVP  +EN+L
Subjt:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
GAY44284.1 hypothetical protein CUMW_081010, partial [Citrus unshiu]8.4e-0641.1Show/hide
Query:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
        D ++AE  ++++G+K AA+++  P++IESDSK V       N +AH L K+AL+     VW +EVP  +EN+L
Subjt:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
TrEMBL top hitse value%identityAlignment
A0A2H5NVX5 RNase H domain-containing protein (Fragment)4.1e-0641.1Show/hide
Query:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
        D ++AE  ++++G+K AA+++  P++IESDSK V       N +AH L K+AL+     VW +EVP  +EN+L
Subjt:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
V4SVT4 RNase H domain-containing protein (Fragment)2.2e-0438.36Show/hide
Query:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
        D ++AE  ++++G+K AA+++   ++IES+SK V       N +AH L K+AL+     VW +EVP  +EN+L
Subjt:  DSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRV------WNRLAHHLAKLALNEPFDFVWFEEVPACVENIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGGCGGTGCGGTTCCATGAATTCGTCAGGGACTCTGATTTAGCGGAAGGATGTTCCATGGTGGATGGGTTGAAGTTTGCTGCTGAAATGAGTTTCTTCCCTGT
GATGATTGAGTCTGATTCTAAGCGTGTTTGGAACCGTTTAGCCCATCACTTGGCGAAATTAGCTTTGAATGAGCCGTTTGATTTTGTTTGGTTTGAAGAGGTTCCTGCAT
GTGTAGAGAACATCTTATTTCTTGATACTATTTCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGGCGGTGCGGTTCCATGAATTCGTCAGGGACTCTGATTTAGCGGAAGGATGTTCCATGGTGGATGGGTTGAAGTTTGCTGCTGAAATGAGTTTCTTCCCTGT
GATGATTGAGTCTGATTCTAAGCGTGTTTGGAACCGTTTAGCCCATCACTTGGCGAAATTAGCTTTGAATGAGCCGTTTGATTTTGTTTGGTTTGAAGAGGTTCCTGCAT
GTGTAGAGAACATCTTATTTCTTGATACTATTTCTCTGTAA
Protein sequenceShow/hide protein sequence
MASAVRFHEFVRDSDLAEGCSMVDGLKFAAEMSFFPVMIESDSKRVWNRLAHHLAKLALNEPFDFVWFEEVPACVENILFLDTISL