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Lag0001904 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001904
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L38, putative
Genome locationchr4:36793841..36794369
RNA-Seq ExpressionLag0001904
SyntenyLag0001904
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022618 - ribonucleoprotein complex assembly (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002675 - Ribosomal protein L38e
IPR038464 - Ribosomal protein L38e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF28545.1 60S ribosomal protein L38, putative [Ricinus communis]3.7e-2782.5Show/hide
Query:  SAAQHILDVFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        S A+++L + + ++   LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
Subjt:  SAAQHILDVFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

EPS63478.1 hypothetical protein M569_11305 [Genlisea aurea]4.1e-2683.54Show/hide
Query:  AQHILD-VFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        A+H+LD   ++E    LPKQIHEIKDFLLTARRKDARSVKIKRSK+VVKFKVRCSKYLYTLCVFD EKADKLKQSLPPG
Subjt:  AQHILD-VFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

WP_139162005.1 hypothetical protein, partial [Acinetobacter baumannii]4.8e-2797.01Show/hide
Query:  VQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        V G LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
Subjt:  VQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

XP_017413899.1 PREDICTED: C-terminal binding protein AN-like [Vigna angularis]7.0e-2691.78Show/hide
Query:  DVFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        D FL  VQ   PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
Subjt:  DVFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

XP_038906668.1 60S ribosomal protein L38-like [Benincasa hispida]9.1e-2698.41Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

TrEMBL top hitse value%identityAlignment
A0A6J1I9U6 60S ribosomal protein L384.4e-2698.41Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

A0A7N2MXZ5 Uncharacterized protein3.4e-2688.41Show/hide
Query:  VEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        ++V G LPKQIHEIKDFLLTARRKDARSVKIK+ KDVVKFKVRCSKYLYTLCVFD+EKA+KLKQSLPPG
Subjt:  VEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

A0A7N2RAH9 Uncharacterized protein3.4e-2688.41Show/hide
Query:  VEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        ++V G LPKQIHEIKDFLLTARRKDARSVKIK+ KDVVKFKVRCSKYLYTLCVFD+EKA+KLKQSLPPG
Subjt:  VEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

B9T6H4 60S ribosomal protein L38, putative1.8e-2782.5Show/hide
Query:  SAAQHILDVFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        S A+++L + + ++   LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
Subjt:  SAAQHILDVFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

S8DKV7 Uncharacterized protein2.0e-2683.54Show/hide
Query:  AQHILD-VFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        A+H+LD   ++E    LPKQIHEIKDFLLTARRKDARSVKIKRSK+VVKFKVRCSKYLYTLCVFD EKADKLKQSLPPG
Subjt:  AQHILD-VFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

SwissProt top hitse value%identityAlignment
O22860 60S ribosomal protein L381.0e-2793.65Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

P46291 60S ribosomal protein L381.2e-2588.89Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +PKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

P63173 60S ribosomal protein L381.4e-2177.78Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

Q32PB9 60S ribosomal protein L381.4e-2177.78Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

Q95V84 60S ribosomal protein L388.9e-2484.13Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +PKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

Arabidopsis top hitse value%identityAlignment
AT2G43460.1 Ribosomal L38e protein family7.2e-2993.65Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG

AT3G59540.1 Ribosomal L38e protein family7.2e-2993.65Show/hide
Query:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG
        +PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLPPG
Subjt:  LPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCTGCAGCTCAACATATTCTTGATGTTTTTTTGGTTGAGGTCCAGGGCATTCTACCGAAGCAAATTCACGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAA
GGATGCTCGTTCCGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTTTGTGTGTTCGACTCTGAGAAGGCAGACA
AGTTGAAGCAATCTCTTCCACCAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCTGCAGCTCAACATATTCTTGATGTTTTTTTGGTTGAGGTCCAGGGCATTCTACCGAAGCAAATTCACGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAA
GGATGCTCGTTCCGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTTTGTGTGTTCGACTCTGAGAAGGCAGACA
AGTTGAAGCAATCTCTTCCACCAGGTTAG
Protein sequenceShow/hide protein sequence
MNSAAQHILDVFLVEVQGILPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG