CuGenDBv2

Gene ID	Lag0001914
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	RING/U-box superfamily protein
Genome location	chr4:36943511..36945944
RNA-Seq Expression	Lag0001914
Synteny	Lag0001914
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domains	IPR001841 - Zinc finger, RING-type IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR017907 - Zinc finger, RING-type, conserved site IPR031127 - E3 ubiquitin ligase RBR family IPR044066 - TRIAD supradomain

Homology

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GenBank top hits

e value

%identity

Alignment

PHT59076.1 hypothetical protein CQW23_01439 [Capsicum baccatum]

1.1e-38

34.67

Show/hide

Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +  E+    E          + C++C    + P+  F N N C H  C  CI K+I+ KLE N  +I CPS  C   LDP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC ++++   +CYCP+R+C ALI+DEC        +S+CP CKR  CF C+  WH G QC+    RE+   ND++     + + KK   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN
         CR + EL  + G  +V+CRC   FC+ C   + + +C C     +   + C    + F ++ +  A L++W N
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN

PHT93504.1 hypothetical protein T459_01386 [Capsicum annuum]

1.1e-38

34.67

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Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +  E+    E          + C++C    + P+  F N N C H  C  CI K+I+ KLE N  +I CPS  C   LDP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC ++++   +CYCP+R+C ALI+DEC        +S+CP CKR  CF C+  WH G QC+    RE+   ND++     + + KK   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN
         CR + EL  + G  +V+CRC   FC+ C   + + +C C     +   + C    + F ++ +  A L++W N
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN

XP_009799143.1 PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Nicotiana sylvestris]

1.9e-38

38.33

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Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +    E  +E Q+F        C++C    + P+  F N N C H  CT CI K+I+ KLE N  +I CPS DCK   DP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC +A++  ++CYCP R+C ALI+DEC        +S+CP CKR+ CF C+  WH G QC+ S  RE+   +D+      + +  K   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC
         CR + E     G  +V+CRC   FC++C   +   +C C
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC

XP_016487820.1 PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Nicotiana tabacum]

5.0e-39

38.75

Show/hide

Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +    E  +E Q+F        C++C    + P+  F N N C H  CT CI K+I+ KLE N  +I CPS DCK   DP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC +A++  ++CYCP R+C ALI+DEC        +S+CP CKR+ CF C+  WH G QC+ S  RE+   ND+      + +  K   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC
         CR + E     G  +V+CRC   FC++C   +   +C C
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC

XP_016539808.1 PREDICTED: probable E3 ubiquitin-protein ligase RNF217 isoform X1 [Capsicum annuum]

8.5e-39

34.67

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Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +  E+    E          + C++C    + P+  F N N C H  C  CI K+I+ KLE N  +I CPS  C   LDP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC ++++   +CYCP+R+C ALI+DEC        +S+CP CKR  CF C+  WH G QC+    RE+   ND++     + + KK   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN
         CR + EL  + G  +V+CRC   FC+ C   + + +C C     +   + C    + F ++ +  A L++W N
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN

TrEMBL top hits

e value

%identity

Alignment

A0A1S4BG20 probable E3 ubiquitin-protein ligase RNF217

2.4e-39

38.75

Show/hide

Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +    E  +E Q+F        C++C    + P+  F N N C H  CT CI K+I+ KLE N  +I CPS DCK   DP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC +A++  ++CYCP R+C ALI+DEC        +S+CP CKR+ CF C+  WH G QC+ S  RE+   ND+      + +  K   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC
         CR + E     G  +V+CRC   FC++C   +   +C C
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC

A0A1U7Y7Q3 probable E3 ubiquitin-protein ligase RNF217

9.2e-39

38.33

Show/hide

Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +    E  +E Q+F        C++C    + P+  F N N C H  CT CI K+I+ KLE N  +I CPS DCK   DP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC +A++  ++CYCP R+C ALI+DEC        +S+CP CKR+ CF C+  WH G QC+ S  RE+   +D+      + +  K   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC
         CR + E     G  +V+CRC   FC++C   +   +C C
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKC

A0A1U8DXQ3 probable E3 ubiquitin-protein ligase RNF217 isoform X1

4.1e-39

34.67

Show/hide

Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +  E+    E          + C++C    + P+  F N N C H  C  CI K+I+ KLE N  +I CPS  C   LDP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC ++++   +CYCP+R+C ALI+DEC        +S+CP CKR  CF C+  WH G QC+    RE+   ND++     + + KK   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN
         CR + EL  + G  +V+CRC   FC+ C   + + +C C     +   + C    + F ++ +  A L++W N
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN

A0A2G2XNK6 Uncharacterized protein

5.4e-39

34.67

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Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +  E+    E          + C++C    + P+  F N N C H  C  CI K+I+ KLE N  +I CPS  C   LDP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC ++++   +CYCP+R+C ALI+DEC        +S+CP CKR  CF C+  WH G QC+    RE+   ND++     + + KK   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN
         CR + EL  + G  +V+CRC   FC+ C   + + +C C     +   + C    + F ++ +  A L++W N
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN

A0A2G3AH05 Uncharacterized protein

5.4e-39

34.67

Show/hide

Query:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD
        MGN L+K    +  E+    E          + C++C    + P+  F N N C H  C  CI K+I+ KLE N  +I CPS  C   LDP+SCR++V  
Subjt:  MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTN-NNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDD

Query:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP
        Q ++ W D LC ++++   +CYCP+R+C ALI+DEC        +S+CP CKR  CF C+  WH G QC+    RE+   ND++     + + KK   CP
Subjt:  QPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCP

Query:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN
         CR + EL  + G  +V+CRC   FC+ C   + + +C C     +   + C    + F ++ +  A L++W N
Subjt:  NCRMYTELVPALGFCMVRCRCKTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWAN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G14250.1 RING/U-box superfamily protein

6.1e-27

30.69

Show/hide

Query:  CQLCHTFSISPSLNFTNNNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDDQPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVD
        C +C     S  +     NC H  CT C  +++ +K++ NA  I CP  +C  L++P +CR ++    +  W   LC + I    K YCP++ C A++V+
Subjt:  CQLCHTFSISPSLNFTNNNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDDQPYLLWLDRLCYAAIVEHKKCYCPYRSCRALIVD

Query:  ECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRR-----REVISLNDMLLMEMTMGKEKKLSCCPNCRMYTELVPALGFCMVRCRCKTVFCFHC
              +  T+++C  C R  C  C+  WH G  CD  +R     ++    +D LL++  M K K+   CP+C+ Y + V   G   ++CRC   FC+ C
Subjt:  ECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRR-----REVISLNDMLLMEMTMGKEKKLSCCPNCRMYTELVPALGFCMVRCRCKTVFCFHC

Query:  ES
         S
Subjt:  ES

AT3G53690.1 RING/U-box superfamily protein

3.3e-33

33.97

Show/hide

Query:  EEDQNFKALTVLYDCQLCHTFSISPSLNFTNNNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDDQPYLLWLDRLCYAAIVEHKK
        E+ Q+  + T  +DC++C   S S   +F    C H  C  C++K+I +KL+ N + I CP   C   L+P  CR I+  + +  W D LC A ++  KK
Subjt:  EEDQNFKALTVLYDCQLCHTFSISPSLNFTNNNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDDQPYLLWLDRLCYAAIVEHKK

Query:  CYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCPNCRMYTELVPALGFCMVRCR
         YCPY+ C AL+  E   +K     S+CP C R +C  C T WH    C+  ++          ++  TM K+KK   CP+C+ Y E   + G   ++CR
Subjt:  CYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCPNCRMYTELVPALGFCMVRCR

Query:  CKTVFCFHC
        C   FC++C
Subjt:  CKTVFCFHC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGCAACATATTGAAGAAACCAATGGCCACCAAACCTGCAGAGATCGAAACCCTAGAAGAAGATCAAAATTTCAAAGCCCTAACAGTCCTTTACGATTGCCAATTATG
CCACACTTTCTCAATCTCACCCTCATTGAACTTCACCAACAACAATTGCCCTCATACCATTTGCACACACTGCATTGCCAAGCACATCAACTCAAAGCTTGAGATCAACG
CCATTGAGATCACCTGCCCCAGCCCCGACTGCAAGGCGCTTCTCGACCCGGTCTCCTGTCGCAGCATCGTCGATGATCAGCCCTACCTGCTGTGGTTGGACCGCCTCTGC
TACGCCGCCATTGTCGAGCACAAGAAATGCTATTGCCCCTACCGGAGTTGTCGCGCTTTGATCGTCGATGAATGCTGCCGCCTCAAGTCGTATCCGACCAAGTCGAAGTG
CCCGGAATGCAAGAGGTGGTTGTGCTTCTTCTGCCGGACGGCGTGGCACGAAGGGCAGCAGTGTGATTTGAGTAGAAGAAGGGAGGTGATAAGTTTGAATGATATGTTGT
TGATGGAAATGACCATGGGAAAGGAGAAGAAGCTTTCTTGTTGCCCTAATTGCCGTATGTATACTGAGCTTGTTCCTGCCCTTGGCTTCTGCATGGTTAGATGCAGATGC
AAGACAGTGTTTTGCTTTCACTGTGAGAGTGAGCTCACAAAGCTTTACTGCAAATGCAAAGAGTTTGAAGAGGAGATCCGCGAATACAATTGCAGAATAATGGCGAAAAT
GTTTTTACTTGTAATGCTTTCTAGTGCAGCTCTCTGGATTTGGGCCAATCACCTAAGCCAAGTAGATGATATTTATTTTTGA

mRNA sequence

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Protein sequence

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MGNILKKPMATKPAEIETLEEDQNFKALTVLYDCQLCHTFSISPSLNFTNNNCPHTICTHCIAKHINSKLEINAIEITCPSPDCKALLDPVSCRSIVDDQPYLLWLDRLC
YAAIVEHKKCYCPYRSCRALIVDECCRLKSYPTKSKCPECKRWLCFFCRTAWHEGQQCDLSRRREVISLNDMLLMEMTMGKEKKLSCCPNCRMYTELVPALGFCMVRCRC
KTVFCFHCESELTKLYCKCKEFEEEIREYNCRIMAKMFLLVMLSSAALWIWANHLSQVDDIYF

Lag0001914 (gene) of Sponge gourd (AG-4) v1 genome