; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001919 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001919
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr4:37039676..37044653
RNA-Seq ExpressionLag0001919
SyntenyLag0001919
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0044267 - cellular protein metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8478472.1 hypothetical protein CXB51_028273 [Gossypium anomalum]1.9e-1148.15Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNELLDEDLIPLL----DVIAKGDLLLNKVSTAENPADMLTKTLPSAK
        +A+LQ+ + LSTTE+EY+A+ E  KE +WL+G+ +EL ++  I +     D+IA+GD++++K+ST ENPADM+TK+LP  K
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNELLDEDLIPLL----DVIAKGDLLLNKVSTAENPADMLTKTLPSAK

KYP42039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]9.2e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]9.2e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]9.2e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

KYP72919.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]9.2e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

TrEMBL top hitse value%identityAlignment
A0A151RHK1 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

A0A151S124 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

A0A151SEX3 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

A0A151U0S6 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-1143.64Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +ASLQSI ALSTTE+EY++  E VKE LW+RG+V EL L +D++ +                               D++  G++LL KV T+ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAKPQ
        TK LP+AK Q
Subjt:  TKTLPSAKPQ

A0A2Z7C9U2 Uncharacterized protein5.8e-1144.44Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML
        +A+LQS+VALSTTE+EYIAV E VKE LWL+G+ +EL L +D + LL                              +V+A G++++ KVST EN ADM+
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-LDEDLIPLL------------------------------DVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAK
        TK LPS K
Subjt:  TKTLPSAK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-0534.26Show/hide
Query:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-------------------------------LDEDLIPLLDVIAKGDLLLNKVSTAENPADML
        Q+ LQ  VALSTTE+EYIA  E  KE +WL+  + EL                               +D     + +++    L + K+ST ENPADML
Subjt:  QASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNEL-------------------------------LDEDLIPLLDVIAKGDLLLNKVSTAENPADML

Query:  TKTLPSAK
        TK +P  K
Subjt:  TKTLPSAK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGACCCATATGGTCTGGTCACTTTCTTTCGGTCCCTGATGCCCCGGATCGCCCCGGTTCCGCCTGGCATGGCCTACACCACACCGGTGTGCAGCGGTTTTTGCT
GGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTCAGGCATCCTTGCAGTCAATTGTTGCACTCTCAACCACAGAGTCTGAAT
ATATAGCAGTTGGAGAAGTTGTAAAAGAGGGACTATGGTTAAGAGGAATGGTCAATGAGCTGCTGGATGAAGATCTAATTCCTCTACTGGACGTGATTGCTAAGGGAGAT
TTGCTGCTGAATAAGGTGAGTACAGCTGAAAATCCTGCAGACATGCTCACAAAGACTTTACCTTCAGCCAAACCTCAGGTGTGGCCCACTGAGACAGGTAGAGCAGGTCA
CAAGGAGGAGTTCCACCGGCTACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGACCCATATGGTCTGGTCACTTTCTTTCGGTCCCTGATGCCCCGGATCGCCCCGGTTCCGCCTGGCATGGCCTACACCACACCGGTGTGCAGCGGTTTTTGCT
GGTTTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTCAGGCATCCTTGCAGTCAATTGTTGCACTCTCAACCACAGAGTCTGAAT
ATATAGCAGTTGGAGAAGTTGTAAAAGAGGGACTATGGTTAAGAGGAATGGTCAATGAGCTGCTGGATGAAGATCTAATTCCTCTACTGGACGTGATTGCTAAGGGAGAT
TTGCTGCTGAATAAGGTGAGTACAGCTGAAAATCCTGCAGACATGCTCACAAAGACTTTACCTTCAGCCAAACCTCAGGTGTGGCCCACTGAGACAGGTAGAGCAGGTCA
CAAGGAGGAGTTCCACCGGCTACTGTAG
Protein sequenceShow/hide protein sequence
MARPIWSGHFLSVPDAPDRPGSAWHGLHHTGVQRFLLVLQVTSSPASTNSLLVSREGQASLQSIVALSTTESEYIAVGEVVKEGLWLRGMVNELLDEDLIPLLDVIAKGD
LLLNKVSTAENPADMLTKTLPSAKPQVWPTETGRAGHKEEFHRLL